RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 FAM196AQ6ZSG2 479 aa23.15■■□□□ 1.3
PTPRA-206ENST00000430705 USP31Q70CQ4 1352 aa23.14■■□□□ 1.3
PTPRA-206ENST00000430705 LTN1O94822 1766 aa23.14■■□□□ 1.29
PTPRA-206ENST00000430705 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
PTPRA-206ENST00000430705 PSDA5PKW4 1024 aaPredicted RBP23.13■■□□□ 1.29
PTPRA-206ENST00000430705 SOX12O15370 315 aa23.13■■□□□ 1.29
PTPRA-206ENST00000430705 EZH2Q15910 746 aaKnown RBP23.13■■□□□ 1.29
PTPRA-206ENST00000430705 TESK2Q96S53 571 aa23.13■■□□□ 1.29
PTPRA-206ENST00000430705 A0A1W2PP64 1363 aa23.13■■□□□ 1.29
PTPRA-206ENST00000430705 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
PTPRA-206ENST00000430705 PDE3BQ13370 1112 aa23.12■■□□□ 1.29
PTPRA-206ENST00000430705 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
PTPRA-206ENST00000430705 NME9Q86XW9 330 aa23.11■■□□□ 1.29
PTPRA-206ENST00000430705 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
PTPRA-206ENST00000430705 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
PTPRA-206ENST00000430705 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
PTPRA-206ENST00000430705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.291e-6■■■□□ 16.5
PTPRA-206ENST00000430705 OVOS2A0A0J9YW53 1432 aa23.09■■□□□ 1.29
PTPRA-206ENST00000430705 OVOS2Q6IE36 1432 aa23.09■■□□□ 1.29
PTPRA-206ENST00000430705 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.29
PTPRA-206ENST00000430705 TOM1L2Q6ZVM7 507 aa23.08■■□□□ 1.29
PTPRA-206ENST00000430705 RGPD3A6NKT7 1758 aaPredicted RBP23.07■■□□□ 1.28
PTPRA-206ENST00000430705 RGPD4Q7Z3J3 1758 aa23.07■■□□□ 1.28
PTPRA-206ENST00000430705 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
PTPRA-206ENST00000430705 PARD3Q8TEW0 1356 aa23.06■■□□□ 1.28
PTPRA-206ENST00000430705 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
PTPRA-206ENST00000430705 APBA3O96018 575 aa23.06■■□□□ 1.28
PTPRA-206ENST00000430705 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
PTPRA-206ENST00000430705 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
PTPRA-206ENST00000430705 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
PTPRA-206ENST00000430705 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
PTPRA-206ENST00000430705 DDB1Q16531 1140 aa23.02■■□□□ 1.28
PTPRA-206ENST00000430705 PTF1AQ7RTS3 328 aa23.02■■□□□ 1.28
PTPRA-206ENST00000430705 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
PTPRA-206ENST00000430705 ERBB3P21860 1342 aa23.01■■□□□ 1.27
PTPRA-206ENST00000430705 USP47Q96K76 1375 aa23.01■■□□□ 1.27
PTPRA-206ENST00000430705 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
PTPRA-206ENST00000430705 BCL9O00512 1426 aa23■■□□□ 1.27
PTPRA-206ENST00000430705 TNS2Q63HR2 1409 aa23■■□□□ 1.27
PTPRA-206ENST00000430705 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
PTPRA-206ENST00000430705 CCDC7Q96M83 1385 aa22.99■■□□□ 1.27
PTPRA-206ENST00000430705 MYOM1P52179 1685 aa22.98■■□□□ 1.27
PTPRA-206ENST00000430705 CSB-PGBD3P0DP91 1061 aa22.98■■□□□ 1.27
PTPRA-206ENST00000430705 CDCA7Q9BWT1 371 aaPredicted RBP22.96■■□□□ 1.27
PTPRA-206ENST00000430705 NHSQ6T4R5 1651 aa22.96■■□□□ 1.27
PTPRA-206ENST00000430705 FAM208AQ9UK61 1670 aaKnown RBP22.96■■□□□ 1.27
PTPRA-206ENST00000430705 ANKRD36BQ8N2N9 1353 aa22.95■■□□□ 1.26
PTPRA-206ENST00000430705 C11orf95C9JLR9 678 aaPredicted RBP22.93■■□□□ 1.26
PTPRA-206ENST00000430705 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
PTPRA-206ENST00000430705 BCL11BQ9C0K0 894 aaPredicted RBP22.91■■□□□ 1.26
PTPRA-206ENST00000430705 KIF20BQ96Q89 1820 aa22.91■■□□□ 1.26
PTPRA-206ENST00000430705 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
PTPRA-206ENST00000430705 CASZ1Q86V15 1759 aa22.91■■□□□ 1.26
PTPRA-206ENST00000430705 FBLN1P23142 703 aa22.89■■□□□ 1.25
PTPRA-206ENST00000430705 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
PTPRA-206ENST00000430705 NLRP2Q9NX02 1062 aa22.89■■□□□ 1.25
PTPRA-206ENST00000430705 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
PTPRA-206ENST00000430705 PLSCR1O15162 318 aa22.88■■□□□ 1.25
PTPRA-206ENST00000430705 MAP3K19Q56UN5 1328 aa22.87■■□□□ 1.25
PTPRA-206ENST00000430705 EXOC5O00471 708 aa22.87■■□□□ 1.25
PTPRA-206ENST00000430705 PROM2Q8N271 834 aa22.87■■□□□ 1.25
PTPRA-206ENST00000430705 IP6K1Q92551 441 aa22.87■■□□□ 1.25
PTPRA-206ENST00000430705 TMF1P82094 1093 aa22.86■■□□□ 1.25
PTPRA-206ENST00000430705 BTAF1O14981 1849 aa22.85■■□□□ 1.25
PTPRA-206ENST00000430705 KCNQ2O43526 872 aa22.85■■□□□ 1.25
PTPRA-206ENST00000430705 IL2RBP14784 551 aa22.85■■□□□ 1.25
PTPRA-206ENST00000430705 COG3Q96JB2 828 aa22.85■■□□□ 1.25
PTPRA-206ENST00000430705 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
PTPRA-206ENST00000430705 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
PTPRA-206ENST00000430705 HOXC9P31274 260 aa22.83■■□□□ 1.25
PTPRA-206ENST00000430705 FYB1O15117 783 aa22.82■■□□□ 1.24
PTPRA-206ENST00000430705 NBPF14Q5TI25 921 aa22.82■■□□□ 1.24
PTPRA-206ENST00000430705 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
PTPRA-206ENST00000430705 RTL1A6NKG5 1358 aa22.81■■□□□ 1.24
PTPRA-206ENST00000430705 LTV1Q96GA3 475 aaPredicted RBP22.81■■□□□ 1.24
PTPRA-206ENST00000430705 GGNBP2Q9H3C7 697 aa22.81■■□□□ 1.24
PTPRA-206ENST00000430705 MEGF6O75095 1541 aa22.81■■□□□ 1.24
PTPRA-206ENST00000430705 ACSBG1Q96GR2 724 aa22.8■■□□□ 1.24
PTPRA-206ENST00000430705 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
PTPRA-206ENST00000430705 RRS1Q15050 365 aaKnown RBP22.79■■□□□ 1.24
PTPRA-206ENST00000430705 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
PTPRA-206ENST00000430705 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
PTPRA-206ENST00000430705 CARD14Q9BXL6 1004 aa22.78■■□□□ 1.24
PTPRA-206ENST00000430705 PDGFDQ9GZP0 370 aaPredicted RBP22.78■■□□□ 1.24
PTPRA-206ENST00000430705 ANKRD26Q9UPS8 1709 aa22.78■■□□□ 1.24
PTPRA-206ENST00000430705 NSD3Q9BZ95 1437 aa22.77■■□□□ 1.24
PTPRA-206ENST00000430705 TXNRD1Q16881 649 aa22.77■■□□□ 1.24
PTPRA-206ENST00000430705 AMPHP49418 695 aa22.75■■□□□ 1.23
PTPRA-206ENST00000430705 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
PTPRA-206ENST00000430705 NSD2O96028 1365 aa22.72■■□□□ 1.23
PTPRA-206ENST00000430705 NBPF6Q5VWK0 638 aa22.71■■□□□ 1.23
PTPRA-206ENST00000430705 NBPF4Q96M43 638 aa22.71■■□□□ 1.23
PTPRA-206ENST00000430705 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.22
PTPRA-206ENST00000430705 SPON1Q9HCB6 807 aa22.7■■□□□ 1.22
PTPRA-206ENST00000430705 INSRP06213 1382 aa22.7■■□□□ 1.22
PTPRA-206ENST00000430705 LY75O60449 1722 aa22.69■■□□□ 1.22
PTPRA-206ENST00000430705 FLT4P35916 1363 aa22.69■■□□□ 1.22
PTPRA-206ENST00000430705 DDX54Q8TDD1 881 aaKnown RBP22.69■■□□□ 1.22
PTPRA-206ENST00000430705 SLC15A2Q16348 729 aa22.68■■□□□ 1.22
PTPRA-206ENST00000430705 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms