RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SPA17Q15506 151 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 KRT85P78386 507 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 AAMPQ13685 434 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 TRIM22Q8IYM9 498 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 TMCO5BA8MYB1 307 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 PTPN14Q15678 1187 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 FBF1Q8TES7 1133 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 ANKRD1Q15327 319 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 NEK4P51957 841 aa19.31■□□□□ 0.68
RIF1-204ENST00000430328 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
RIF1-204ENST00000430328 COMMD10Q9Y6G5 202 aa19.31■□□□□ 0.68
RIF1-204ENST00000430328 ESPNB1AK53 854 aa19.31■□□□□ 0.68
RIF1-204ENST00000430328 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
RIF1-204ENST00000430328 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 ZSCAN12O43309 604 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 FILIP1Q7Z7B0 1213 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
RIF1-204ENST00000430328 COG3Q96JB2 828 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 TRERF1Q96PN7 1200 aa19.3■□□□□ 0.68
RIF1-204ENST00000430328 FSD1Q9BTV5 496 aa19.29■□□□□ 0.68
RIF1-204ENST00000430328 NOL3O60936 208 aaKnown RBP19.29■□□□□ 0.68
RIF1-204ENST00000430328 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
RIF1-204ENST00000430328 WDR33Q9C0J8 1336 aaKnown RBP19.29■□□□□ 0.68
RIF1-204ENST00000430328 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
RIF1-204ENST00000430328 CEP57L1Q8IYX8 460 aa19.29■□□□□ 0.68
RIF1-204ENST00000430328 FSD2A1L4K1 749 aa19.29■□□□□ 0.68
RIF1-204ENST00000430328 FOXD1Q16676 465 aa19.28■□□□□ 0.68
RIF1-204ENST00000430328 CCDC6Q16204 474 aa19.28■□□□□ 0.68
RIF1-204ENST00000430328 HSPA4P34932 840 aa19.28■□□□□ 0.68
RIF1-204ENST00000430328 CTR9Q6PD62 1173 aa19.28■□□□□ 0.68
RIF1-204ENST00000430328 MPNDQ8N594 471 aa19.28■□□□□ 0.68
RIF1-204ENST00000430328 SMARCC1Q92922 1105 aaPredicted RBP19.28■□□□□ 0.68
RIF1-204ENST00000430328 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
RIF1-204ENST00000430328 VPS36Q86VN1 386 aa19.27■□□□□ 0.68
RIF1-204ENST00000430328 NOL7Q9UMY1 257 aaKnown RBP19.27■□□□□ 0.68
RIF1-204ENST00000430328 PAFAH1B1P43034 410 aa19.27■□□□□ 0.67
RIF1-204ENST00000430328 IRX3P78415 501 aaPredicted RBP19.26■□□□□ 0.67
RIF1-204ENST00000430328 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
RIF1-204ENST00000430328 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
RIF1-204ENST00000430328 NAA15Q9BXJ9 866 aaKnown RBP19.26■□□□□ 0.67
RIF1-204ENST00000430328 CEP83Q9Y592 693 aa19.26■□□□□ 0.67
RIF1-204ENST00000430328 GTF2F1P35269 517 aaKnown RBP eCLIP19.26■□□□□ 0.67
RIF1-204ENST00000430328 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
RIF1-204ENST00000430328 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
RIF1-204ENST00000430328 SREK1Q8WXA9 508 aaKnown RBP19.25■□□□□ 0.67
RIF1-204ENST00000430328 CPSF2Q9P2I0 782 aaKnown RBP19.25■□□□□ 0.67
RIF1-204ENST00000430328 SETSIPP0DME0 302 aa19.25■□□□□ 0.67
RIF1-204ENST00000430328 RAB3IL1Q8TBN0 382 aa19.25■□□□□ 0.67
RIF1-204ENST00000430328 CTNNBL1Q8WYA6 563 aaPredicted RBP19.25■□□□□ 0.67
RIF1-204ENST00000430328 CCDC57Q2TAC2 916 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 CCDC83Q8IWF9 413 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 TSNARE1Q96NA8 513 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 KIF4BQ2VIQ3 1234 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
RIF1-204ENST00000430328 BBXQ8WY36 941 aaPredicted RBP19.24■□□□□ 0.67
RIF1-204ENST00000430328 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
RIF1-204ENST00000430328 PABPN1LA6NDY0 278 aaKnown RBP19.23■□□□□ 0.67
RIF1-204ENST00000430328 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.67
RIF1-204ENST00000430328 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
RIF1-204ENST00000430328 NUP62CLQ9H1M0 184 aa19.23■□□□□ 0.67
RIF1-204ENST00000430328 PPP1R14CQ8TAE6 165 aa19.22■□□□□ 0.67
RIF1-204ENST00000430328 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
RIF1-204ENST00000430328 HLTFQ14527 1009 aaKnown RBP eCLIP19.22■□□□□ 0.674e-7■■□□□ 14.4
RIF1-204ENST00000430328 CCDC69A6NI79 296 aa19.22■□□□□ 0.67
RIF1-204ENST00000430328 SSBP05455 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
RIF1-204ENST00000430328 CTNNA2P26232 953 aa19.22■□□□□ 0.67
RIF1-204ENST00000430328 URI1O94763 535 aaPredicted RBP19.21■□□□□ 0.67
RIF1-204ENST00000430328 ZSCAN30Q86W11 494 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 CYP46A1Q9Y6A2 500 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 SWAP70Q9UH65 585 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 NUP155O75694 1391 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 CDKL5O76039 1030 aa19.21■□□□□ 0.67
RIF1-204ENST00000430328 FEZ2Q9UHY8 353 aaPredicted RBP19.21■□□□□ 0.67
RIF1-204ENST00000430328 SPATA32Q96LK8 384 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 LMAN1P49257 510 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 PSMD1Q99460 953 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 ZFYP08048 801 aaPredicted RBP19.2■□□□□ 0.66
RIF1-204ENST00000430328 RIPK4P57078 832 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 CEP112Q8N8E3 955 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 MPHOSPH10O00566 681 aaKnown RBP19.2■□□□□ 0.66
RIF1-204ENST00000430328 USO1O60763 962 aaKnown RBP19.2■□□□□ 0.66
RIF1-204ENST00000430328 CACNA2D4Q7Z3S7 1137 aa19.2■□□□□ 0.66
RIF1-204ENST00000430328 IKBKGQ9Y6K9 419 aa19.19■□□□□ 0.66
RIF1-204ENST00000430328 FKBP15Q5T1M5 1219 aa19.19■□□□□ 0.66
RIF1-204ENST00000430328 LARP1BQ659C4 914 aaKnown RBP19.19■□□□□ 0.66
RIF1-204ENST00000430328 SSX2IPQ9Y2D8 614 aa19.19■□□□□ 0.66
RIF1-204ENST00000430328 MXRA7P84157 204 aa19.19■□□□□ 0.66
RIF1-204ENST00000430328 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■■□□ 17.6
RIF1-204ENST00000430328 PANK3Q9H999 370 aa19.19■□□□□ 0.66
RIF1-204ENST00000430328 MACROD2A1Z1Q3 448 aa19.18■□□□□ 0.66
RIF1-204ENST00000430328 ANAPC4Q9UJX5 808 aa19.18■□□□□ 0.66
RIF1-204ENST00000430328 ANKS4BQ8N8V4 417 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms