RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 ABCC6O95255 1503 aa17.51■□□□□ 0.39
POLR1B-206ENST00000430293 USP47Q96K76 1375 aa17.51■□□□□ 0.39
POLR1B-206ENST00000430293 CRB1P82279 1406 aa17.5■□□□□ 0.39
POLR1B-206ENST00000430293 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
POLR1B-206ENST00000430293 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 ARHGEF25Q86VW2 580 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
POLR1B-206ENST00000430293 LTN1O94822 1766 aa17.48■□□□□ 0.39
POLR1B-206ENST00000430293 PEAK1Q9H792 1746 aa17.48■□□□□ 0.39
POLR1B-206ENST00000430293 NME9Q86XW9 330 aa17.48■□□□□ 0.39
POLR1B-206ENST00000430293 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 TRIM37O94972 964 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 YY1P25490 414 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 EVA1CP58658 441 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 TCP11L2Q8N4U5 519 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
POLR1B-206ENST00000430293 MYOM1P52179 1685 aa17.46■□□□□ 0.39
POLR1B-206ENST00000430293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
POLR1B-206ENST00000430293 KCNH5Q8NCM2 988 aa17.46■□□□□ 0.39
POLR1B-206ENST00000430293 TMC1Q8TDI8 760 aa17.46■□□□□ 0.39
POLR1B-206ENST00000430293 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
POLR1B-206ENST00000430293 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
POLR1B-206ENST00000430293 SOX12O15370 315 aa17.44■□□□□ 0.38
POLR1B-206ENST00000430293 FAM196AQ6ZSG2 479 aa17.44■□□□□ 0.38
POLR1B-206ENST00000430293 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
POLR1B-206ENST00000430293 WDR17Q8IZU2 1322 aa17.44■□□□□ 0.38
POLR1B-206ENST00000430293 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
POLR1B-206ENST00000430293 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
POLR1B-206ENST00000430293 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
POLR1B-206ENST00000430293 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
POLR1B-206ENST00000430293 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
POLR1B-206ENST00000430293 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
POLR1B-206ENST00000430293 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
POLR1B-206ENST00000430293 APBA3O96018 575 aa17.41■□□□□ 0.38
POLR1B-206ENST00000430293 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
POLR1B-206ENST00000430293 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
POLR1B-206ENST00000430293 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
POLR1B-206ENST00000430293 TMF1P82094 1093 aa17.37■□□□□ 0.37
POLR1B-206ENST00000430293 ERBB3P21860 1342 aa17.37■□□□□ 0.37
POLR1B-206ENST00000430293 CEP350Q5VT06 3117 aa17.37■□□□□ 0.37
POLR1B-206ENST00000430293 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
POLR1B-206ENST00000430293 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
POLR1B-206ENST00000430293 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
POLR1B-206ENST00000430293 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
POLR1B-206ENST00000430293 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
POLR1B-206ENST00000430293 KCNQ2O43526 872 aa17.34■□□□□ 0.37
POLR1B-206ENST00000430293 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
POLR1B-206ENST00000430293 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
POLR1B-206ENST00000430293 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
POLR1B-206ENST00000430293 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
POLR1B-206ENST00000430293 BCL9O00512 1426 aa17.33■□□□□ 0.36
POLR1B-206ENST00000430293 CSB-PGBD3P0DP91 1061 aa17.32■□□□□ 0.36
POLR1B-206ENST00000430293 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
POLR1B-206ENST00000430293 DDB1Q16531 1140 aa17.31■□□□□ 0.36
POLR1B-206ENST00000430293 MARCH10Q8NA82 808 aaPredicted RBP17.31■□□□□ 0.36
POLR1B-206ENST00000430293 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 CHD4Q14839 1912 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 FYB1O15117 783 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 FBLN1P23142 703 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
POLR1B-206ENST00000430293 RGPD2P0DJD1 1756 aa17.3■□□□□ 0.36
POLR1B-206ENST00000430293 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
POLR1B-206ENST00000430293 COG3Q96JB2 828 aa17.29■□□□□ 0.36
POLR1B-206ENST00000430293 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
POLR1B-206ENST00000430293 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
POLR1B-206ENST00000430293 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
POLR1B-206ENST00000430293 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
POLR1B-206ENST00000430293 CCER1Q8TC90 406 aaPredicted RBP17.28■□□□□ 0.36
POLR1B-206ENST00000430293 IP6K1Q92551 441 aa17.28■□□□□ 0.36
POLR1B-206ENST00000430293 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
POLR1B-206ENST00000430293 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
POLR1B-206ENST00000430293 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
POLR1B-206ENST00000430293 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
POLR1B-206ENST00000430293 SHANK3Q9BYB0 1731 aa17.27■□□□□ 0.36
POLR1B-206ENST00000430293 ANKRD26Q9UPS8 1709 aa17.27■□□□□ 0.36
POLR1B-206ENST00000430293 HOXC9P31274 260 aa17.27■□□□□ 0.36
POLR1B-206ENST00000430293 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
POLR1B-206ENST00000430293 PLSCR1O15162 318 aa17.25■□□□□ 0.35
POLR1B-206ENST00000430293 ZNF784Q8NCA9 323 aaPredicted RBP17.25■□□□□ 0.35
POLR1B-206ENST00000430293 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
POLR1B-206ENST00000430293 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
POLR1B-206ENST00000430293 PTGER2P43116 358 aa17.24■□□□□ 0.35
POLR1B-206ENST00000430293 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
POLR1B-206ENST00000430293 IL2RBP14784 551 aa17.23■□□□□ 0.35
POLR1B-206ENST00000430293 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
POLR1B-206ENST00000430293 PROM2Q8N271 834 aa17.23■□□□□ 0.35
POLR1B-206ENST00000430293 MEGF6O75095 1541 aa17.22■□□□□ 0.35
POLR1B-206ENST00000430293 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
POLR1B-206ENST00000430293 EXOC5O00471 708 aa17.21■□□□□ 0.35
POLR1B-206ENST00000430293 LTV1Q96GA3 475 aaPredicted RBP17.21■□□□□ 0.35
POLR1B-206ENST00000430293 BTAF1O14981 1849 aa17.19■□□□□ 0.34
POLR1B-206ENST00000430293 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
POLR1B-206ENST00000430293 AMPHP49418 695 aa17.19■□□□□ 0.34
POLR1B-206ENST00000430293 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
POLR1B-206ENST00000430293 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
POLR1B-206ENST00000430293 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 252.9 ms