RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TESK2Q96S53 571 aa16.81■□□□□ 0.28
HDAC4-202ENST00000430200 SHANK3Q9BYB0 1731 aa16.81■□□□□ 0.28
HDAC4-202ENST00000430200 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
HDAC4-202ENST00000430200 SOX12O15370 315 aa16.8■□□□□ 0.28
HDAC4-202ENST00000430200 FAM208AQ9UK61 1670 aaKnown RBP16.8■□□□□ 0.28
HDAC4-202ENST00000430200 USP31Q70CQ4 1352 aa16.79■□□□□ 0.28
HDAC4-202ENST00000430200 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-202ENST00000430200 NME9Q86XW9 330 aa16.79■□□□□ 0.28
HDAC4-202ENST00000430200 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
HDAC4-202ENST00000430200 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
HDAC4-202ENST00000430200 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
HDAC4-202ENST00000430200 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
HDAC4-202ENST00000430200 NHSQ6T4R5 1651 aa16.78■□□□□ 0.28
HDAC4-202ENST00000430200 EVA1CP58658 441 aa16.77■□□□□ 0.28
HDAC4-202ENST00000430200 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
HDAC4-202ENST00000430200 PSDA5PKW4 1024 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-202ENST00000430200 TRIM37O94972 964 aa16.76■□□□□ 0.27
HDAC4-202ENST00000430200 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
HDAC4-202ENST00000430200 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■■■□ 21.2
HDAC4-202ENST00000430200 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
HDAC4-202ENST00000430200 BAG6P46379 1132 aa16.75■□□□□ 0.27
HDAC4-202ENST00000430200 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
HDAC4-202ENST00000430200 OVOS2A0A0G2JMS6 1433 aa16.75■□□□□ 0.27
HDAC4-202ENST00000430200 USP47Q96K76 1375 aa16.75■□□□□ 0.27
HDAC4-202ENST00000430200 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
HDAC4-202ENST00000430200 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
HDAC4-202ENST00000430200 BTAF1O14981 1849 aa16.73■□□□□ 0.27
HDAC4-202ENST00000430200 TNS2Q63HR2 1409 aa16.73■□□□□ 0.27
HDAC4-202ENST00000430200 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
HDAC4-202ENST00000430200 FAM196AQ6ZSG2 479 aa16.72■□□□□ 0.27
HDAC4-202ENST00000430200 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
HDAC4-202ENST00000430200 CAMKK2Q96RR4 588 aa16.72■□□□□ 0.27
HDAC4-202ENST00000430200 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
HDAC4-202ENST00000430200 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
HDAC4-202ENST00000430200 DOT1LQ8TEK3 1739 aa16.71■□□□□ 0.27
HDAC4-202ENST00000430200 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
HDAC4-202ENST00000430200 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
HDAC4-202ENST00000430200 ERBB3P21860 1342 aa16.7■□□□□ 0.26
HDAC4-202ENST00000430200 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
HDAC4-202ENST00000430200 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
HDAC4-202ENST00000430200 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
HDAC4-202ENST00000430200 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
HDAC4-202ENST00000430200 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-202ENST00000430200 ANKRD36BQ8N2N9 1353 aa16.67■□□□□ 0.26
HDAC4-202ENST00000430200 APBA3O96018 575 aa16.67■□□□□ 0.26
HDAC4-202ENST00000430200 TUBGCP6Q96RT7 1819 aa16.67■□□□□ 0.26
HDAC4-202ENST00000430200 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
HDAC4-202ENST00000430200 BCL9O00512 1426 aa16.66■□□□□ 0.26
HDAC4-202ENST00000430200 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-202ENST00000430200 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
HDAC4-202ENST00000430200 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
HDAC4-202ENST00000430200 FBLN1P23142 703 aa16.65■□□□□ 0.26
HDAC4-202ENST00000430200 DDB1Q16531 1140 aa16.65■□□□□ 0.26
HDAC4-202ENST00000430200 CCDC7Q96M83 1385 aa16.64■□□□□ 0.26
HDAC4-202ENST00000430200 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
HDAC4-202ENST00000430200 CSB-PGBD3P0DP91 1061 aa16.63■□□□□ 0.25
HDAC4-202ENST00000430200 TOGARAM1Q9Y4F4 1720 aa16.62■□□□□ 0.25
HDAC4-202ENST00000430200 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
HDAC4-202ENST00000430200 MEGF6O75095 1541 aa16.62■□□□□ 0.25
HDAC4-202ENST00000430200 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
HDAC4-202ENST00000430200 ANKRD24Q8TF21 1146 aa16.61■□□□□ 0.25
HDAC4-202ENST00000430200 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-202ENST00000430200 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
HDAC4-202ENST00000430200 LY75O60449 1722 aa16.61■□□□□ 0.25
HDAC4-202ENST00000430200 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
HDAC4-202ENST00000430200 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
HDAC4-202ENST00000430200 NLRP2Q9NX02 1062 aa16.58■□□□□ 0.24
HDAC4-202ENST00000430200 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
HDAC4-202ENST00000430200 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
HDAC4-202ENST00000430200 KCNQ2O43526 872 aa16.57■□□□□ 0.24
HDAC4-202ENST00000430200 PROM2Q8N271 834 aa16.57■□□□□ 0.24
HDAC4-202ENST00000430200 CDCA7Q9BWT1 371 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-202ENST00000430200 GGNBP2Q9H3C7 697 aa16.57■□□□□ 0.24
HDAC4-202ENST00000430200 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
HDAC4-202ENST00000430200 HOXC9P31274 260 aa16.56■□□□□ 0.24
HDAC4-202ENST00000430200 TMF1P82094 1093 aa16.56■□□□□ 0.24
HDAC4-202ENST00000430200 IP6K1Q92551 441 aa16.56■□□□□ 0.24
HDAC4-202ENST00000430200 ITGB4P16144 1822 aa16.56■□□□□ 0.24
HDAC4-202ENST00000430200 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
HDAC4-202ENST00000430200 FYB1O15117 783 aa16.55■□□□□ 0.24
HDAC4-202ENST00000430200 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
HDAC4-202ENST00000430200 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-202ENST00000430200 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
HDAC4-202ENST00000430200 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-202ENST00000430200 IL2RBP14784 551 aa16.54■□□□□ 0.24
HDAC4-202ENST00000430200 COG3Q96JB2 828 aa16.54■□□□□ 0.24
HDAC4-202ENST00000430200 PDGFDQ9GZP0 370 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-202ENST00000430200 PLSCR1O15162 318 aa16.53■□□□□ 0.24
HDAC4-202ENST00000430200 ACSBG1Q96GR2 724 aa16.53■□□□□ 0.24
HDAC4-202ENST00000430200 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
HDAC4-202ENST00000430200 NSD2O96028 1365 aa16.52■□□□□ 0.24
HDAC4-202ENST00000430200 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
HDAC4-202ENST00000430200 EXOC5O00471 708 aa16.52■□□□□ 0.24
HDAC4-202ENST00000430200 C5P01031 1676 aa16.5■□□□□ 0.23
HDAC4-202ENST00000430200 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-202ENST00000430200 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
HDAC4-202ENST00000430200 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
HDAC4-202ENST00000430200 UTRNP46939 3433 aa16.48■□□□□ 0.23
HDAC4-202ENST00000430200 TXNRD1Q16881 649 aa16.48■□□□□ 0.23
HDAC4-202ENST00000430200 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms