RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 CDK12Q9NYV4 1490 aaPredicted RBP26.19■■□□□ 1.78
PTCD1-203ENST00000430029 HOXC9P31274 260 aa26.19■■□□□ 1.78
PTCD1-203ENST00000430029 IP6K1Q92551 441 aa26.19■■□□□ 1.78
PTCD1-203ENST00000430029 KIF24Q5T7B8 1368 aa26.19■■□□□ 1.78
PTCD1-203ENST00000430029 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
PTCD1-203ENST00000430029 AXIN2Q9Y2T1 843 aa26.18■■□□□ 1.78
PTCD1-203ENST00000430029 RTL1A6NKG5 1358 aa26.18■■□□□ 1.78
PTCD1-203ENST00000430029 FLT4P35916 1363 aa26.18■■□□□ 1.78
PTCD1-203ENST00000430029 HSP90AB2PQ58FF8 381 aa26.17■■□□□ 1.78
PTCD1-203ENST00000430029 LMO7Q8WWI1 1683 aa26.16■■□□□ 1.78
PTCD1-203ENST00000430029 INSRP06213 1382 aa26.16■■□□□ 1.78
PTCD1-203ENST00000430029 COL3A1P02461 1466 aaPredicted RBP26.16■■□□□ 1.78
PTCD1-203ENST00000430029 RGPD5Q99666 1765 aa26.15■■□□□ 1.78
PTCD1-203ENST00000430029 ABCC6O95255 1503 aa26.14■■□□□ 1.78
PTCD1-203ENST00000430029 CAMTA1Q9Y6Y1 1673 aa26.14■■□□□ 1.78
PTCD1-203ENST00000430029 COL14A1Q05707 1796 aaKnown RBP26.14■■□□□ 1.78
PTCD1-203ENST00000430029 CCER2I3L3R5 266 aa26.12■■□□□ 1.77
PTCD1-203ENST00000430029 BLMP54132 1417 aaPredicted RBP26.12■■□□□ 1.77
PTCD1-203ENST00000430029 CFAP53Q96M91 514 aa26.1■■□□□ 1.77
PTCD1-203ENST00000430029 PLCH1Q4KWH8 1693 aa26.09■■□□□ 1.77
PTCD1-203ENST00000430029 EIF4A2Q14240 407 aaKnown RBP26.09■■□□□ 1.77
PTCD1-203ENST00000430029 C8orf37Q96NL8 207 aa26.09■■□□□ 1.77
PTCD1-203ENST00000430029 MRS2Q9HD23 443 aa26.09■■□□□ 1.77
PTCD1-203ENST00000430029 IL13P35225 146 aa26.08■■□□□ 1.77
PTCD1-203ENST00000430029 LTV1Q96GA3 475 aaPredicted RBP26.08■■□□□ 1.77
PTCD1-203ENST00000430029 BTG4Q9NY30 223 aa26.08■■□□□ 1.77
PTCD1-203ENST00000430029 COL5A2P05997 1499 aaPredicted RBP26.07■■□□□ 1.76
PTCD1-203ENST00000430029 ANKRD24Q8TF21 1146 aa26.07■■□□□ 1.76
PTCD1-203ENST00000430029 SLIT2O94813 1529 aa26.07■■□□□ 1.76
PTCD1-203ENST00000430029 DIAPH1O60610 1272 aaKnown RBP26.06■■□□□ 1.76
PTCD1-203ENST00000430029 MEX3CQ5U5Q3 659 aaKnown RBP26.06■■□□□ 1.76
PTCD1-203ENST00000430029 ERBB3P21860 1342 aa26.06■■□□□ 1.76
PTCD1-203ENST00000430029 NGLY1Q96IV0 654 aa26.05■■□□□ 1.76
PTCD1-203ENST00000430029 NRAPQ86VF7 1730 aa26.04■■□□□ 1.76
PTCD1-203ENST00000430029 NWD2Q9ULI1 1742 aa26.03■■□□□ 1.76
PTCD1-203ENST00000430029 FNBP4Q8N3X1 1017 aaPredicted RBP26.03■■□□□ 1.76
PTCD1-203ENST00000430029 STRN4Q9NRL3 753 aa26.02■■□□□ 1.76
PTCD1-203ENST00000430029 RGPD2P0DJD1 1756 aa26.01■■□□□ 1.75
PTCD1-203ENST00000430029 RGPD1P0DJD0 1748 aa26■■□□□ 1.75
PTCD1-203ENST00000430029 BCL9LQ86UU0 1499 aa26■■□□□ 1.75
PTCD1-203ENST00000430029 WDR17Q8IZU2 1322 aa26■■□□□ 1.75
PTCD1-203ENST00000430029 PNISRQ8TF01 805 aaKnown RBP26■■□□□ 1.75
PTCD1-203ENST00000430029 EYA1Q99502 592 aa26■■□□□ 1.75
PTCD1-203ENST00000430029 EVA1CP58658 441 aa25.99■■□□□ 1.75
PTCD1-203ENST00000430029 LARP1Q6PKG0 1096 aaKnown RBP25.99■■□□□ 1.75
PTCD1-203ENST00000430029 AFF2P51816 1311 aa25.98■■□□□ 1.75
PTCD1-203ENST00000430029 U2SURPO15042 1029 aaKnown RBP25.98■■□□□ 1.75
PTCD1-203ENST00000430029 CSB-PGBD3P0DP91 1061 aa25.98■■□□□ 1.75
PTCD1-203ENST00000430029 NBPF6Q5VWK0 638 aa25.98■■□□□ 1.75
PTCD1-203ENST00000430029 NBPF4Q96M43 638 aa25.98■■□□□ 1.75
PTCD1-203ENST00000430029 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
PTCD1-203ENST00000430029 NUDCQ9Y266 331 aa25.97■■□□□ 1.75
PTCD1-203ENST00000430029 IGSF1Q8N6C5 1336 aa25.96■■□□□ 1.75
PTCD1-203ENST00000430029 FAM208AQ9UK61 1670 aaKnown RBP25.96■■□□□ 1.75
PTCD1-203ENST00000430029 USHBP1Q8N6Y0 703 aa25.95■■□□□ 1.74
PTCD1-203ENST00000430029 NLRP2Q9NX02 1062 aa25.95■■□□□ 1.74
PTCD1-203ENST00000430029 USP21Q9UK80 565 aa25.95■■□□□ 1.74
PTCD1-203ENST00000430029 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.94■■□□□ 1.74
PTCD1-203ENST00000430029 U2AF1L5P0DN76 240 aaPredicted RBP25.94■■□□□ 1.74
PTCD1-203ENST00000430029 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.74
PTCD1-203ENST00000430029 TOM1L2Q6ZVM7 507 aa25.94■■□□□ 1.74
PTCD1-203ENST00000430029 NCAPD2Q15021 1401 aa25.94■■□□□ 1.74
PTCD1-203ENST00000430029 AEBP1Q8IUX7 1158 aa25.93■■□□□ 1.74
PTCD1-203ENST00000430029 ADAMTS8Q9UP79 889 aa25.93■■□□□ 1.74
PTCD1-203ENST00000430029 CRB1P82279 1406 aa25.93■■□□□ 1.74
PTCD1-203ENST00000430029 WDR43Q15061 677 aaKnown RBP eCLIP25.92■■□□□ 1.74
PTCD1-203ENST00000430029 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
PTCD1-203ENST00000430029 HMOX1P09601 288 aa25.91■■□□□ 1.74
PTCD1-203ENST00000430029 SULT6B1Q6IMI4 303 aa25.91■■□□□ 1.74
PTCD1-203ENST00000430029 FAM9BQ8IZU0 186 aa25.91■■□□□ 1.74
PTCD1-203ENST00000430029 VPS72Q15906 364 aa25.9■■□□□ 1.74
PTCD1-203ENST00000430029 KDRP35968 1356 aa25.89■■□□□ 1.74
PTCD1-203ENST00000430029 RSPH6AQ9H0K4 717 aa25.88■■□□□ 1.73
PTCD1-203ENST00000430029 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
PTCD1-203ENST00000430029 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
PTCD1-203ENST00000430029 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
PTCD1-203ENST00000430029 ATRNO75882 1429 aa25.87■■□□□ 1.73
PTCD1-203ENST00000430029 USP35Q9P2H5 1018 aa25.86■■□□□ 1.73
PTCD1-203ENST00000430029 FCHSD2O94868 740 aa25.85■■□□□ 1.73
PTCD1-203ENST00000430029 RGS17Q9UGC6 210 aaPredicted RBP25.85■■□□□ 1.73
PTCD1-203ENST00000430029 TRPC5Q9UL62 973 aaPredicted RBP25.84■■□□□ 1.73
PTCD1-203ENST00000430029 CCDC9Q9Y3X0 531 aaKnown RBP25.84■■□□□ 1.73
PTCD1-203ENST00000430029 PRKAR2BP31323 418 aa25.83■■□□□ 1.73
PTCD1-203ENST00000430029 PLEKHF1Q96S99 279 aa25.83■■□□□ 1.73
PTCD1-203ENST00000430029 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
PTCD1-203ENST00000430029 TCP11L2Q8N4U5 519 aa25.82■■□□□ 1.72
PTCD1-203ENST00000430029 QTRT2Q9H974 415 aaKnown RBP25.82■■□□□ 1.72
PTCD1-203ENST00000430029 MEGF6O75095 1541 aa25.82■■□□□ 1.72
PTCD1-203ENST00000430029 ZNF772Q68DY9 489 aaPredicted RBP25.81■■□□□ 1.72
PTCD1-203ENST00000430029 GLI3P10071 1580 aa25.81■■□□□ 1.72
PTCD1-203ENST00000430029 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
PTCD1-203ENST00000430029 DISP2A7MBM2 1401 aa25.8■■□□□ 1.72
PTCD1-203ENST00000430029 PHACTR3Q96KR7 559 aa25.79■■□□□ 1.72
PTCD1-203ENST00000430029 THRAP3Q9Y2W1 955 aaKnown RBP25.79■■□□□ 1.72
PTCD1-203ENST00000430029 WNK3Q9BYP7 1800 aa25.79■■□□□ 1.72
PTCD1-203ENST00000430029 IL2RBP14784 551 aa25.77■■□□□ 1.72
PTCD1-203ENST00000430029 BARGINQ6ZT62 677 aa25.77■■□□□ 1.72
PTCD1-203ENST00000430029 RAPGEF4Q8WZA2 1011 aa25.77■■□□□ 1.72
PTCD1-203ENST00000430029 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
PTCD1-203ENST00000430029 TATP17735 454 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms