RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 ZNF316A6NFI3 1004 aaPredicted RBP17.68■□□□□ 0.42
BX088651.4-202ENST00000428895 CHRNA2Q15822 529 aa17.68■□□□□ 0.42
BX088651.4-202ENST00000428895 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
BX088651.4-202ENST00000428895 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
BX088651.4-202ENST00000428895 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
BX088651.4-202ENST00000428895 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
BX088651.4-202ENST00000428895 FBLN1P23142 703 aa17.64■□□□□ 0.41
BX088651.4-202ENST00000428895 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
BX088651.4-202ENST00000428895 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
BX088651.4-202ENST00000428895 CAMTA1Q9Y6Y1 1673 aa17.64■□□□□ 0.41
BX088651.4-202ENST00000428895 COL18A1P39060 1754 aa17.64■□□□□ 0.41
BX088651.4-202ENST00000428895 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 EP400Q96L91 3159 aa17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 NSD2O96028 1365 aa17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
BX088651.4-202ENST00000428895 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
BX088651.4-202ENST00000428895 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
BX088651.4-202ENST00000428895 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
BX088651.4-202ENST00000428895 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
BX088651.4-202ENST00000428895 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
BX088651.4-202ENST00000428895 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
BX088651.4-202ENST00000428895 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.41
BX088651.4-202ENST00000428895 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.41
BX088651.4-202ENST00000428895 AXIN2Q9Y2T1 843 aa17.58■□□□□ 0.41
BX088651.4-202ENST00000428895 COL5A2P05997 1499 aaPredicted RBP17.58■□□□□ 0.41
BX088651.4-202ENST00000428895 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
BX088651.4-202ENST00000428895 PEAK1Q9H792 1746 aa17.57■□□□□ 0.4
BX088651.4-202ENST00000428895 AMPHP49418 695 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 EVA1CP58658 441 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 ABCC6O95255 1503 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 KRT27Q7Z3Y8 459 aa17.56■□□□□ 0.4
BX088651.4-202ENST00000428895 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
BX088651.4-202ENST00000428895 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
BX088651.4-202ENST00000428895 BLMP54132 1417 aaPredicted RBP17.54■□□□□ 0.4
BX088651.4-202ENST00000428895 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
BX088651.4-202ENST00000428895 IP6K1Q92551 441 aa17.54■□□□□ 0.4
BX088651.4-202ENST00000428895 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
BX088651.4-202ENST00000428895 A0A0G2JS52 829 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 HOXC9P31274 260 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 MYT1Q01538 1121 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 BARGINQ6ZT62 677 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 RGPD2P0DJD1 1756 aa17.53■□□□□ 0.4
BX088651.4-202ENST00000428895 RTL1A6NKG5 1358 aa17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 CSB-PGBD3P0DP91 1061 aa17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 LTV1Q96GA3 475 aaPredicted RBP17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 CRB1P82279 1406 aa17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 FLT4P35916 1363 aa17.51■□□□□ 0.39
BX088651.4-202ENST00000428895 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
BX088651.4-202ENST00000428895 ERBB3P21860 1342 aa17.49■□□□□ 0.39
BX088651.4-202ENST00000428895 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
BX088651.4-202ENST00000428895 TOM1L2Q6ZVM7 507 aa17.49■□□□□ 0.39
BX088651.4-202ENST00000428895 INSRP06213 1382 aa17.47■□□□□ 0.39
BX088651.4-202ENST00000428895 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
BX088651.4-202ENST00000428895 MTHFSP49914 203 aa17.46■□□□□ 0.39
BX088651.4-202ENST00000428895 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
BX088651.4-202ENST00000428895 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
BX088651.4-202ENST00000428895 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
BX088651.4-202ENST00000428895 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
BX088651.4-202ENST00000428895 LRRC37A3O60309 1634 aa17.44■□□□□ 0.38
BX088651.4-202ENST00000428895 FAM182BQ5T319 152 aa17.44■□□□□ 0.38
BX088651.4-202ENST00000428895 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
BX088651.4-202ENST00000428895 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
BX088651.4-202ENST00000428895 DISP2A7MBM2 1401 aa17.42■□□□□ 0.38
BX088651.4-202ENST00000428895 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
BX088651.4-202ENST00000428895 RALBP1Q15311 655 aa17.41■□□□□ 0.38
BX088651.4-202ENST00000428895 DEFB132Q7Z7B7 95 aa17.41■□□□□ 0.38
BX088651.4-202ENST00000428895 NBPF6Q5VWK0 638 aa17.4■□□□□ 0.38
BX088651.4-202ENST00000428895 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
BX088651.4-202ENST00000428895 NBPF4Q96M43 638 aa17.4■□□□□ 0.38
BX088651.4-202ENST00000428895 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
BX088651.4-202ENST00000428895 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
BX088651.4-202ENST00000428895 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
BX088651.4-202ENST00000428895 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
BX088651.4-202ENST00000428895 BAG6P46379 1132 aa17.37■□□□□ 0.37
BX088651.4-202ENST00000428895 SBF2Q86WG5 1849 aa17.37■□□□□ 0.37
BX088651.4-202ENST00000428895 EYA1Q99502 592 aa17.37■□□□□ 0.37
BX088651.4-202ENST00000428895 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
BX088651.4-202ENST00000428895 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
BX088651.4-202ENST00000428895 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
BX088651.4-202ENST00000428895 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
BX088651.4-202ENST00000428895 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
BX088651.4-202ENST00000428895 IL13P35225 146 aa17.35■□□□□ 0.37
BX088651.4-202ENST00000428895 DDB1Q16531 1140 aa17.35■□□□□ 0.37
BX088651.4-202ENST00000428895 BCL9O00512 1426 aa17.35■□□□□ 0.37
BX088651.4-202ENST00000428895 RGPD3A6NKT7 1758 aaPredicted RBP17.34■□□□□ 0.37
BX088651.4-202ENST00000428895 RGPD4Q7Z3J3 1758 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms