RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 RRS1Q15050 365 aaKnown RBP30.49■■■□□ 2.47
PTPN18-205ENST00000428843 TRPC5Q9UL62 973 aaPredicted RBP30.49■■■□□ 2.47
PTPN18-205ENST00000428843 AXIN2Q9Y2T1 843 aa30.49■■■□□ 2.47
PTPN18-205ENST00000428843 CC2D1BQ5T0F9 858 aaKnown RBP30.48■■■□□ 2.47
PTPN18-205ENST00000428843 MORC1Q86VD1 984 aa30.48■■■□□ 2.47
PTPN18-205ENST00000428843 NPC1L1Q9UHC9 1359 aa30.48■■■□□ 2.47
PTPN18-205ENST00000428843 TNNT2P45379 298 aaPredicted RBP30.47■■■□□ 2.47
PTPN18-205ENST00000428843 MAP2P11137 1827 aaKnown RBP30.47■■■□□ 2.47
PTPN18-205ENST00000428843 COL5A2P05997 1499 aaPredicted RBP30.46■■■□□ 2.47
PTPN18-205ENST00000428843 STRN4Q9NRL3 753 aa30.46■■■□□ 2.47
PTPN18-205ENST00000428843 EVA1CP58658 441 aa30.45■■■□□ 2.47
PTPN18-205ENST00000428843 VPS72Q15906 364 aa30.45■■■□□ 2.47
PTPN18-205ENST00000428843 CNGB1Q14028 1251 aaPredicted RBP30.44■■■□□ 2.46
PTPN18-205ENST00000428843 AMPHP49418 695 aa30.43■■■□□ 2.46
PTPN18-205ENST00000428843 IP6K1Q92551 441 aa30.43■■■□□ 2.46
PTPN18-205ENST00000428843 PEAK1Q9H792 1746 aa30.43■■■□□ 2.46
PTPN18-205ENST00000428843 HOXC9P31274 260 aa30.41■■■□□ 2.46
PTPN18-205ENST00000428843 CCDC9Q9Y3X0 531 aaKnown RBP30.41■■■□□ 2.46
PTPN18-205ENST00000428843 EMILIN1Q9Y6C2 1016 aa30.41■■■□□ 2.46
PTPN18-205ENST00000428843 RTL1A6NKG5 1358 aa30.41■■■□□ 2.46
PTPN18-205ENST00000428843 GJD4Q96KN9 370 aaPredicted RBP30.4■■■□□ 2.46
PTPN18-205ENST00000428843 BLMP54132 1417 aaPredicted RBP30.39■■■□□ 2.46
PTPN18-205ENST00000428843 RXRBP28702 533 aa30.39■■■□□ 2.46
PTPN18-205ENST00000428843 RBM6P78332 1123 aaKnown RBP30.39■■■□□ 2.46
PTPN18-205ENST00000428843 LARP1Q6PKG0 1096 aaKnown RBP30.39■■■□□ 2.46
PTPN18-205ENST00000428843 POLKQ9UBT6 870 aa30.39■■■□□ 2.46
PTPN18-205ENST00000428843 GLI3P10071 1580 aa30.39■■■□□ 2.46
PTPN18-205ENST00000428843 SPATA31A5Q5VU36 1347 aa30.37■■■□□ 2.45
PTPN18-205ENST00000428843 SPATA31A7Q8IWB4 1347 aa30.37■■■□□ 2.45
PTPN18-205ENST00000428843 KIF24Q5T7B8 1368 aa30.37■■■□□ 2.45
PTPN18-205ENST00000428843 PPM1GO15355 546 aaPredicted RBP30.36■■■□□ 2.45
PTPN18-205ENST00000428843 FLT4P35916 1363 aa30.36■■■□□ 2.45
PTPN18-205ENST00000428843 ANKRD24Q8TF21 1146 aa30.35■■■□□ 2.45
PTPN18-205ENST00000428843 WDR17Q8IZU2 1322 aa30.35■■■□□ 2.45
PTPN18-205ENST00000428843 ERBB3P21860 1342 aa30.34■■■□□ 2.45
PTPN18-205ENST00000428843 CSB-PGBD3P0DP91 1061 aa30.34■■■□□ 2.45
PTPN18-205ENST00000428843 CRB1P82279 1406 aa30.33■■■□□ 2.45
PTPN18-205ENST00000428843 SPATA31A1Q5TZJ5 1347 aa30.33■■■□□ 2.45
PTPN18-205ENST00000428843 SMG6Q86US8 1419 aaKnown RBP30.32■■■□□ 2.44
PTPN18-205ENST00000428843 HSP90AB2PQ58FF8 381 aa30.32■■■□□ 2.44
PTPN18-205ENST00000428843 TOM1L2Q6ZVM7 507 aa30.32■■■□□ 2.44
PTPN18-205ENST00000428843 LTV1Q96GA3 475 aaPredicted RBP30.32■■■□□ 2.44
PTPN18-205ENST00000428843 INSRP06213 1382 aa30.31■■■□□ 2.44
PTPN18-205ENST00000428843 USP35Q9P2H5 1018 aa30.3■■■□□ 2.44
PTPN18-205ENST00000428843 FAM208AQ9UK61 1670 aaKnown RBP30.29■■■□□ 2.44
PTPN18-205ENST00000428843 CDK12Q9NYV4 1490 aaPredicted RBP30.28■■■□□ 2.44
PTPN18-205ENST00000428843 ILDR2Q71H61 639 aa30.27■■■□□ 2.44
PTPN18-205ENST00000428843 RGPD2P0DJD1 1756 aa30.27■■■□□ 2.44
PTPN18-205ENST00000428843 RGS12O14924 1447 aa30.26■■■□□ 2.43
PTPN18-205ENST00000428843 CARD10Q9BWT7 1032 aa30.26■■■□□ 2.43
PTPN18-205ENST00000428843 FAM98CQ17RN3 349 aaKnown RBP30.25■■■□□ 2.43
PTPN18-205ENST00000428843 TCP11L2Q8N4U5 519 aa30.25■■■□□ 2.43
PTPN18-205ENST00000428843 NLRP2Q9NX02 1062 aa30.25■■■□□ 2.43
PTPN18-205ENST00000428843 MTHFSP49914 203 aa30.24■■■□□ 2.43
PTPN18-205ENST00000428843 PARD3Q8TEW0 1356 aa30.24■■■□□ 2.43
PTPN18-205ENST00000428843 THRAP3Q9Y2W1 955 aaKnown RBP30.23■■■□□ 2.43
PTPN18-205ENST00000428843 ONECUT3O60422 494 aaPredicted RBP30.22■■■□□ 2.43
PTPN18-205ENST00000428843 BARGINQ6ZT62 677 aa30.21■■■□□ 2.43
PTPN18-205ENST00000428843 WNK3Q9BYP7 1800 aa30.21■■■□□ 2.43
PTPN18-205ENST00000428843 THSD7AQ9UPZ6 1657 aa30.2■■■□□ 2.43
PTPN18-205ENST00000428843 PPP2R1AP30153 589 aa30.19■■■□□ 2.42
PTPN18-205ENST00000428843 SEPT12Q8IYM1 358 aa30.19■■■□□ 2.42
PTPN18-205ENST00000428843 EIF4A2Q14240 407 aaKnown RBP30.18■■■□□ 2.42
PTPN18-205ENST00000428843 A0A0G2JS52 829 aa30.17■■■□□ 2.42
PTPN18-205ENST00000428843 MYT1Q01538 1121 aa30.17■■■□□ 2.42
PTPN18-205ENST00000428843 NBPF6Q5VWK0 638 aa30.17■■■□□ 2.42
PTPN18-205ENST00000428843 NBPF4Q96M43 638 aa30.17■■■□□ 2.42
PTPN18-205ENST00000428843 BRWD3Q6RI45 1802 aa30.17■■■□□ 2.42
PTPN18-205ENST00000428843 RALBP1Q15311 655 aa30.16■■■□□ 2.42
PTPN18-205ENST00000428843 DISP2A7MBM2 1401 aa30.13■■■□□ 2.41
PTPN18-205ENST00000428843 USHBP1Q8N6Y0 703 aa30.13■■■□□ 2.41
PTPN18-205ENST00000428843 PARP4Q9UKK3 1724 aaKnown RBP30.13■■■□□ 2.41
PTPN18-205ENST00000428843 EYA1Q99502 592 aa30.12■■■□□ 2.41
PTPN18-205ENST00000428843 IL13P35225 146 aa30.1■■■□□ 2.41
PTPN18-205ENST00000428843 CDCA7Q9BWT1 371 aaPredicted RBP30.1■■■□□ 2.41
PTPN18-205ENST00000428843 COL3A1P02461 1466 aaPredicted RBP30.1■■■□□ 2.41
PTPN18-205ENST00000428843 NCAPD2Q15021 1401 aa30.09■■■□□ 2.41
PTPN18-205ENST00000428843 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
PTPN18-205ENST00000428843 LRRC37A3O60309 1634 aa30.08■■■□□ 2.41
PTPN18-205ENST00000428843 IL2RBP14784 551 aa30.08■■■□□ 2.41
PTPN18-205ENST00000428843 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
PTPN18-205ENST00000428843 RGPD1P0DJD0 1748 aa30.07■■■□□ 2.4
PTPN18-205ENST00000428843 DIAPH1O60610 1272 aaKnown RBP30.06■■■□□ 2.4
PTPN18-205ENST00000428843 IGSF1Q8N6C5 1336 aa30.05■■■□□ 2.4
PTPN18-205ENST00000428843 MYBBP1AQ9BQG0 1328 aaKnown RBP30.05■■■□□ 2.4
PTPN18-205ENST00000428843 KRT27Q7Z3Y8 459 aa30.05■■■□□ 2.4
PTPN18-205ENST00000428843 MEGF6O75095 1541 aa30.04■■■□□ 2.4
PTPN18-205ENST00000428843 DDB1Q16531 1140 aa30.03■■■□□ 2.4
PTPN18-205ENST00000428843 RAPGEF4Q8WZA2 1011 aa30.01■■■□□ 2.39
PTPN18-205ENST00000428843 TNS2Q63HR2 1409 aa30■■■□□ 2.39
PTPN18-205ENST00000428843 EXOC5O00471 708 aa30■■■□□ 2.39
PTPN18-205ENST00000428843 PDE3BQ13370 1112 aa30■■■□□ 2.39
PTPN18-205ENST00000428843 TATP17735 454 aaPredicted RBP29.99■■■□□ 2.39
PTPN18-205ENST00000428843 OVOS2A0A0G2JMS6 1433 aa29.98■■■□□ 2.39
PTPN18-205ENST00000428843 ANP32CO43423 234 aa29.97■■■□□ 2.39
PTPN18-205ENST00000428843 FAM182BQ5T319 152 aa29.96■■■□□ 2.39
PTPN18-205ENST00000428843 SULT6B1Q6IMI4 303 aa29.96■■■□□ 2.39
PTPN18-205ENST00000428843 AEBP1Q8IUX7 1158 aa29.96■■■□□ 2.39
PTPN18-205ENST00000428843 U2SURPO15042 1029 aaKnown RBP29.95■■■□□ 2.39
PTPN18-205ENST00000428843 SHANK3Q9BYB0 1731 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms