RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 NFAT5O94916 1531 aa14.98□□□□□ -0.01
CECR3-201ENST00000428828 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
CECR3-201ENST00000428828 RRS1Q15050 365 aaKnown RBP14.98□□□□□ -0.01
CECR3-201ENST00000428828 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
CECR3-201ENST00000428828 HSPA1LP34931 641 aa14.98□□□□□ -0.01
CECR3-201ENST00000428828 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
CECR3-201ENST00000428828 PNPLA6Q8IY17 1366 aa14.97□□□□□ -0.01
CECR3-201ENST00000428828 USP19O94966 1318 aa14.97□□□□□ -0.01
CECR3-201ENST00000428828 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
CECR3-201ENST00000428828 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.02
CECR3-201ENST00000428828 GCP02774 474 aa14.95□□□□□ -0.02
CECR3-201ENST00000428828 ZC3H6P61129 1189 aaKnown RBP14.94□□□□□ -0.02
CECR3-201ENST00000428828 CCDC184Q52MB2 194 aa14.94□□□□□ -0.02
CECR3-201ENST00000428828 KCNH5Q8NCM2 988 aa14.94□□□□□ -0.02
CECR3-201ENST00000428828 AATKQ6ZMQ8 1374 aa14.94□□□□□ -0.02
CECR3-201ENST00000428828 MTHFSP49914 203 aa14.94□□□□□ -0.02
CECR3-201ENST00000428828 GLIPR1L2Q4G1C9 344 aa14.94□□□□□ -0.02
CECR3-201ENST00000428828 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
CECR3-201ENST00000428828 POLKQ9UBT6 870 aa14.93□□□□□ -0.02
CECR3-201ENST00000428828 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
CECR3-201ENST00000428828 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
CECR3-201ENST00000428828 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
CECR3-201ENST00000428828 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
CECR3-201ENST00000428828 MRS2Q9HD23 443 aa14.92□□□□□ -0.02
CECR3-201ENST00000428828 JCADQ9P266 1359 aa14.92□□□□□ -0.02
CECR3-201ENST00000428828 IRX6P78412 446 aaPredicted RBP14.92□□□□□ -0.02
CECR3-201ENST00000428828 RGPD2P0DJD1 1756 aa14.92□□□□□ -0.02
CECR3-201ENST00000428828 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
CECR3-201ENST00000428828 AMPHP49418 695 aa14.91□□□□□ -0.02
CECR3-201ENST00000428828 CDK12Q9NYV4 1490 aaPredicted RBP14.91□□□□□ -0.02
CECR3-201ENST00000428828 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
CECR3-201ENST00000428828 COL18A1P39060 1754 aa14.91□□□□□ -0.02
CECR3-201ENST00000428828 PLCH1Q4KWH8 1693 aa14.9□□□□□ -0.02
CECR3-201ENST00000428828 B4GALNT3Q6L9W6 998 aa14.9□□□□□ -0.02
CECR3-201ENST00000428828 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
CECR3-201ENST00000428828 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
CECR3-201ENST00000428828 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
CECR3-201ENST00000428828 ADAMTS2O95450 1211 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 COL14A1Q05707 1796 aaKnown RBP14.88□□□□□ -0.03
CECR3-201ENST00000428828 FLT4P35916 1363 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
CECR3-201ENST00000428828 ARHGEF25Q86VW2 580 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 PRDM11Q9NQV5 511 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
CECR3-201ENST00000428828 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
CECR3-201ENST00000428828 HOXC9P31274 260 aa14.87□□□□□ -0.03
CECR3-201ENST00000428828 HSP90AB2PQ58FF8 381 aa14.87□□□□□ -0.03
CECR3-201ENST00000428828 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
CECR3-201ENST00000428828 LRP6O75581 1613 aa14.86□□□□□ -0.03
CECR3-201ENST00000428828 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
CECR3-201ENST00000428828 LTV1Q96GA3 475 aaPredicted RBP14.86□□□□□ -0.03
CECR3-201ENST00000428828 CPDO75976 1380 aa14.86□□□□□ -0.03
CECR3-201ENST00000428828 NEFMP07197 916 aa14.86□□□□□ -0.03
CECR3-201ENST00000428828 IP6K1Q92551 441 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 GSE1Q14687 1217 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 FAM9BQ8IZU0 186 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 ABCC6O95255 1503 aa14.84□□□□□ -0.03
CECR3-201ENST00000428828 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.03
CECR3-201ENST00000428828 CAMTA1Q9Y6Y1 1673 aa14.83□□□□□ -0.03
CECR3-201ENST00000428828 KIF24Q5T7B8 1368 aa14.83□□□□□ -0.04
CECR3-201ENST00000428828 U2SURPO15042 1029 aaKnown RBP14.83□□□□□ -0.04
CECR3-201ENST00000428828 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
CECR3-201ENST00000428828 RGPD1P0DJD0 1748 aa14.83□□□□□ -0.04
CECR3-201ENST00000428828 BLMP54132 1417 aaPredicted RBP14.83□□□□□ -0.04
CECR3-201ENST00000428828 INSRP06213 1382 aa14.83□□□□□ -0.04
CECR3-201ENST00000428828 NRAPQ86VF7 1730 aa14.82□□□□□ -0.04
CECR3-201ENST00000428828 FAM83GA6ND36 823 aa14.82□□□□□ -0.04
CECR3-201ENST00000428828 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
CECR3-201ENST00000428828 NWD2Q9ULI1 1742 aa14.82□□□□□ -0.04
CECR3-201ENST00000428828 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
CECR3-201ENST00000428828 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
CECR3-201ENST00000428828 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
CECR3-201ENST00000428828 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
CECR3-201ENST00000428828 STRN4Q9NRL3 753 aa14.8□□□□□ -0.04
CECR3-201ENST00000428828 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
CECR3-201ENST00000428828 PNISRQ8TF01 805 aaKnown RBP14.8□□□□□ -0.04
CECR3-201ENST00000428828 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
CECR3-201ENST00000428828 COL5A2P05997 1499 aaPredicted RBP14.79□□□□□ -0.04
CECR3-201ENST00000428828 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
CECR3-201ENST00000428828 IL13P35225 146 aa14.79□□□□□ -0.04
CECR3-201ENST00000428828 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
CECR3-201ENST00000428828 DAXXQ9UER7 740 aaPredicted RBP14.79□□□□□ -0.04
CECR3-201ENST00000428828 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
CECR3-201ENST00000428828 ERBB3P21860 1342 aa14.79□□□□□ -0.04
CECR3-201ENST00000428828 HMOX1P09601 288 aa14.78□□□□□ -0.04
CECR3-201ENST00000428828 USHBP1Q8N6Y0 703 aa14.78□□□□□ -0.04
CECR3-201ENST00000428828 BRPF3Q9ULD4 1205 aa14.78□□□□□ -0.04
CECR3-201ENST00000428828 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.04
CECR3-201ENST00000428828 NGLY1Q96IV0 654 aa14.77□□□□□ -0.04
CECR3-201ENST00000428828 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.04
CECR3-201ENST00000428828 SENP3-EIF4A1A0A087X0R7 540 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 MS4A1P11836 297 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 EVA1CP58658 441 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 EYA1Q99502 592 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 NLRP2Q9NX02 1062 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
CECR3-201ENST00000428828 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms