RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
DDX39B-208ENST00000428098 BCL9O00512 1426 aa17.77■□□□□ 0.44
DDX39B-208ENST00000428098 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
DDX39B-208ENST00000428098 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
DDX39B-208ENST00000428098 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
DDX39B-208ENST00000428098 CDK19Q9BWU1 502 aa17.76■□□□□ 0.43
DDX39B-208ENST00000428098 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
DDX39B-208ENST00000428098 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
DDX39B-208ENST00000428098 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
DDX39B-208ENST00000428098 NLRP13Q86W25 1043 aa17.74■□□□□ 0.43
DDX39B-208ENST00000428098 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
DDX39B-208ENST00000428098 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
DDX39B-208ENST00000428098 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
DDX39B-208ENST00000428098 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
DDX39B-208ENST00000428098 AATKQ6ZMQ8 1374 aa17.72■□□□□ 0.43
DDX39B-208ENST00000428098 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.431e-8■□□□□ 8.9
DDX39B-208ENST00000428098 HSPA6P17066 643 aa17.72■□□□□ 0.43
DDX39B-208ENST00000428098 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
DDX39B-208ENST00000428098 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
DDX39B-208ENST00000428098 EXOC5O00471 708 aa17.68■□□□□ 0.42
DDX39B-208ENST00000428098 ITSN1Q15811 1721 aa17.68■□□□□ 0.42
DDX39B-208ENST00000428098 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
DDX39B-208ENST00000428098 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
DDX39B-208ENST00000428098 WDR17Q8IZU2 1322 aa17.68■□□□□ 0.42
DDX39B-208ENST00000428098 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
DDX39B-208ENST00000428098 ACSBG1Q96GR2 724 aa17.67■□□□□ 0.42
DDX39B-208ENST00000428098 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
DDX39B-208ENST00000428098 GRIN3BO60391 1043 aa17.65■□□□□ 0.42
DDX39B-208ENST00000428098 NLRP6P59044 892 aa17.65■□□□□ 0.42
DDX39B-208ENST00000428098 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
DDX39B-208ENST00000428098 COL18A1P39060 1754 aa17.65■□□□□ 0.42
DDX39B-208ENST00000428098 SLC16A10Q8TF71 515 aa17.64■□□□□ 0.41
DDX39B-208ENST00000428098 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
DDX39B-208ENST00000428098 GPBP1L1Q9HC44 474 aaPredicted RBP17.64■□□□□ 0.41
DDX39B-208ENST00000428098 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
DDX39B-208ENST00000428098 POLD1P28340 1107 aa17.63■□□□□ 0.41
DDX39B-208ENST00000428098 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
DDX39B-208ENST00000428098 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
DDX39B-208ENST00000428098 ZNF526Q8TF50 670 aaPredicted RBP17.61■□□□□ 0.41
DDX39B-208ENST00000428098 PNPLA7Q6ZV29 1317 aa17.61■□□□□ 0.41
DDX39B-208ENST00000428098 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
DDX39B-208ENST00000428098 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
DDX39B-208ENST00000428098 COL24A1Q17RW2 1714 aa17.59■□□□□ 0.41
DDX39B-208ENST00000428098 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
DDX39B-208ENST00000428098 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.41
DDX39B-208ENST00000428098 SLIT3O75094 1523 aa17.58■□□□□ 0.41
DDX39B-208ENST00000428098 USP6P35125 1406 aa17.58■□□□□ 0.41
DDX39B-208ENST00000428098 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
DDX39B-208ENST00000428098 KCNQ4P56696 695 aa17.58■□□□□ 0.4
DDX39B-208ENST00000428098 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
DDX39B-208ENST00000428098 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
DDX39B-208ENST00000428098 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
DDX39B-208ENST00000428098 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
DDX39B-208ENST00000428098 ADCY9O60503 1353 aa17.55■□□□□ 0.4
DDX39B-208ENST00000428098 TFCP2L1Q9NZI6 479 aa17.55■□□□□ 0.4
DDX39B-208ENST00000428098 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
DDX39B-208ENST00000428098 KIF3CO14782 793 aa17.54■□□□□ 0.4
DDX39B-208ENST00000428098 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
DDX39B-208ENST00000428098 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
DDX39B-208ENST00000428098 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
DDX39B-208ENST00000428098 BTAF1O14981 1849 aa17.54■□□□□ 0.4
DDX39B-208ENST00000428098 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
DDX39B-208ENST00000428098 SOX12O15370 315 aa17.53■□□□□ 0.4
DDX39B-208ENST00000428098 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
DDX39B-208ENST00000428098 CAPN15O75808 1086 aa17.52■□□□□ 0.4
DDX39B-208ENST00000428098 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
DDX39B-208ENST00000428098 CCDC7Q96M83 1385 aa17.52■□□□□ 0.39
DDX39B-208ENST00000428098 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
DDX39B-208ENST00000428098 APLP1P51693 650 aa17.49■□□□□ 0.39
DDX39B-208ENST00000428098 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
DDX39B-208ENST00000428098 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
DDX39B-208ENST00000428098 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
DDX39B-208ENST00000428098 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
DDX39B-208ENST00000428098 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
DDX39B-208ENST00000428098 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
DDX39B-208ENST00000428098 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
DDX39B-208ENST00000428098 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
DDX39B-208ENST00000428098 KCNH5Q8NCM2 988 aa17.47■□□□□ 0.39
DDX39B-208ENST00000428098 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
DDX39B-208ENST00000428098 IL2RBP14784 551 aa17.46■□□□□ 0.39
DDX39B-208ENST00000428098 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
DDX39B-208ENST00000428098 ABCC6O95255 1503 aa17.46■□□□□ 0.39
DDX39B-208ENST00000428098 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
DDX39B-208ENST00000428098 MSH5O43196 834 aa17.45■□□□□ 0.38
DDX39B-208ENST00000428098 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
DDX39B-208ENST00000428098 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
DDX39B-208ENST00000428098 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
DDX39B-208ENST00000428098 PRELPP51888 382 aa17.41■□□□□ 0.38
DDX39B-208ENST00000428098 HTRA3P83110 453 aa17.41■□□□□ 0.38
DDX39B-208ENST00000428098 ERBB3P21860 1342 aa17.41■□□□□ 0.38
DDX39B-208ENST00000428098 NFAT5O94916 1531 aa17.41■□□□□ 0.38
DDX39B-208ENST00000428098 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
DDX39B-208ENST00000428098 TOMM70O94826 608 aa17.39■□□□□ 0.37
DDX39B-208ENST00000428098 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
DDX39B-208ENST00000428098 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
DDX39B-208ENST00000428098 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
DDX39B-208ENST00000428098 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
DDX39B-208ENST00000428098 NSD2O96028 1365 aa17.38■□□□□ 0.37
DDX39B-208ENST00000428098 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
DDX39B-208ENST00000428098 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms