RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 EP400Q96L91 3159 aa23.2■■□□□ 1.3
VRK2-204ENST00000428021 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
VRK2-204ENST00000428021 FYB1O15117 783 aa23.19■■□□□ 1.3
VRK2-204ENST00000428021 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
VRK2-204ENST00000428021 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
VRK2-204ENST00000428021 COG3Q96JB2 828 aa23.17■■□□□ 1.3
VRK2-204ENST00000428021 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
VRK2-204ENST00000428021 ABCC6O95255 1503 aa23.16■■□□□ 1.3
VRK2-204ENST00000428021 LTN1O94822 1766 aa23.16■■□□□ 1.3
VRK2-204ENST00000428021 GGNBP2Q9H3C7 697 aa23.15■■□□□ 1.3
VRK2-204ENST00000428021 CRB1P82279 1406 aa23.15■■□□□ 1.3
VRK2-204ENST00000428021 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
VRK2-204ENST00000428021 BARGINQ6ZT62 677 aa23.14■■□□□ 1.29
VRK2-204ENST00000428021 TCP11L2Q8N4U5 519 aa23.14■■□□□ 1.29
VRK2-204ENST00000428021 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 KIF20BQ96Q89 1820 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 A0A0G2JS52 829 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 FBLN1P23142 703 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 MYT1Q01538 1121 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 KRT27Q7Z3Y8 459 aa23.13■■□□□ 1.29
VRK2-204ENST00000428021 THRAP3Q9Y2W1 955 aaKnown RBP23.11■■□□□ 1.29
VRK2-204ENST00000428021 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
VRK2-204ENST00000428021 PANK3Q9H999 370 aa23.09■■□□□ 1.29
VRK2-204ENST00000428021 MAP3K19Q56UN5 1328 aa23.08■■□□□ 1.29
VRK2-204ENST00000428021 IP6K1Q92551 441 aa23.08■■□□□ 1.29
VRK2-204ENST00000428021 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
VRK2-204ENST00000428021 CARD10Q9BWT7 1032 aa23.07■■□□□ 1.28
VRK2-204ENST00000428021 ERBB3P21860 1342 aa23.07■■□□□ 1.28
VRK2-204ENST00000428021 CSB-PGBD3P0DP91 1061 aa23.06■■□□□ 1.28
VRK2-204ENST00000428021 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
VRK2-204ENST00000428021 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
VRK2-204ENST00000428021 FAM182BQ5T319 152 aa23.04■■□□□ 1.28
VRK2-204ENST00000428021 ANKRD24Q8TF21 1146 aa23.04■■□□□ 1.28
VRK2-204ENST00000428021 BLMP54132 1417 aaPredicted RBP23.04■■□□□ 1.28
VRK2-204ENST00000428021 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
VRK2-204ENST00000428021 HOXC9P31274 260 aa23.03■■□□□ 1.28
VRK2-204ENST00000428021 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
VRK2-204ENST00000428021 CCDC125Q86Z20 511 aa23.02■■□□□ 1.28
VRK2-204ENST00000428021 AMPHP49418 695 aa23.01■■□□□ 1.27
VRK2-204ENST00000428021 DISP2A7MBM2 1401 aa23■■□□□ 1.27
VRK2-204ENST00000428021 CCDC7Q96M83 1385 aa23■■□□□ 1.27
VRK2-204ENST00000428021 NLRP2Q9NX02 1062 aa22.99■■□□□ 1.27
VRK2-204ENST00000428021 RTL1A6NKG5 1358 aa22.99■■□□□ 1.27
VRK2-204ENST00000428021 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
VRK2-204ENST00000428021 LRRC37A3O60309 1634 aa22.98■■□□□ 1.27
VRK2-204ENST00000428021 PDE3BQ13370 1112 aa22.98■■□□□ 1.27
VRK2-204ENST00000428021 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
VRK2-204ENST00000428021 ANKRD26Q9UPS8 1709 aa22.98■■□□□ 1.27
VRK2-204ENST00000428021 CDCA7Q9BWT1 371 aaPredicted RBP22.97■■□□□ 1.27
VRK2-204ENST00000428021 WASHC2AQ641Q2 1341 aa22.97■■□□□ 1.27
VRK2-204ENST00000428021 DDB1Q16531 1140 aa22.95■■□□□ 1.26
VRK2-204ENST00000428021 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.26
VRK2-204ENST00000428021 FAM196AQ6ZSG2 479 aa22.95■■□□□ 1.26
VRK2-204ENST00000428021 FAM208AQ9UK61 1670 aaKnown RBP22.95■■□□□ 1.26
VRK2-204ENST00000428021 EMILIN1Q9Y6C2 1016 aa22.95■■□□□ 1.26
VRK2-204ENST00000428021 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
VRK2-204ENST00000428021 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
VRK2-204ENST00000428021 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
VRK2-204ENST00000428021 NSD2O96028 1365 aa22.93■■□□□ 1.26
VRK2-204ENST00000428021 FLT4P35916 1363 aa22.93■■□□□ 1.26
VRK2-204ENST00000428021 INSRP06213 1382 aa22.92■■□□□ 1.26
VRK2-204ENST00000428021 PER1O15534 1290 aaPredicted RBP22.92■■□□□ 1.26
VRK2-204ENST00000428021 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
VRK2-204ENST00000428021 AMER1Q5JTC6 1135 aaPredicted RBP22.91■■□□□ 1.26
VRK2-204ENST00000428021 DEFB132Q7Z7B7 95 aa22.91■■□□□ 1.26
VRK2-204ENST00000428021 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
VRK2-204ENST00000428021 IL2RBP14784 551 aa22.9■■□□□ 1.26
VRK2-204ENST00000428021 TNNT2P45379 298 aaPredicted RBP22.9■■□□□ 1.26
VRK2-204ENST00000428021 MARCH10Q8NA82 808 aaPredicted RBP22.9■■□□□ 1.26
VRK2-204ENST00000428021 RGPD1P0DJD0 1748 aa22.9■■□□□ 1.26
VRK2-204ENST00000428021 EXOC5O00471 708 aa22.89■■□□□ 1.25
VRK2-204ENST00000428021 TRIM37O94972 964 aa22.89■■□□□ 1.25
VRK2-204ENST00000428021 SF3B2Q13435 895 aaKnown RBP22.89■■□□□ 1.25
VRK2-204ENST00000428021 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
VRK2-204ENST00000428021 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
VRK2-204ENST00000428021 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
VRK2-204ENST00000428021 TNS2Q63HR2 1409 aa22.88■■□□□ 1.25
VRK2-204ENST00000428021 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
VRK2-204ENST00000428021 OVOS2A0A0G2JMS6 1433 aa22.87■■□□□ 1.25
VRK2-204ENST00000428021 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
VRK2-204ENST00000428021 SBF2Q86WG5 1849 aa22.85■■□□□ 1.25
VRK2-204ENST00000428021 SMG6Q86US8 1419 aaKnown RBP22.85■■□□□ 1.25
VRK2-204ENST00000428021 BCL9O00512 1426 aa22.84■■□□□ 1.25
VRK2-204ENST00000428021 BAG6P46379 1132 aa22.83■■□□□ 1.25
VRK2-204ENST00000428021 USHBP1Q8N6Y0 703 aa22.83■■□□□ 1.25
VRK2-204ENST00000428021 MEGF6O75095 1541 aa22.82■■□□□ 1.24
VRK2-204ENST00000428021 EN1Q05925 392 aaPredicted RBP22.81■■□□□ 1.24
VRK2-204ENST00000428021 APBA3O96018 575 aa22.79■■□□□ 1.24
VRK2-204ENST00000428021 PTF1AQ7RTS3 328 aa22.79■■□□□ 1.24
VRK2-204ENST00000428021 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
VRK2-204ENST00000428021 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
VRK2-204ENST00000428021 CC2D1BQ5T0F9 858 aaKnown RBP22.78■■□□□ 1.24
VRK2-204ENST00000428021 CAMKK2Q96RR4 588 aa22.78■■□□□ 1.24
VRK2-204ENST00000428021 EYA1Q99502 592 aa22.78■■□□□ 1.24
VRK2-204ENST00000428021 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.24
VRK2-204ENST00000428021 EIF4A2Q14240 407 aaKnown RBP22.77■■□□□ 1.24
VRK2-204ENST00000428021 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
VRK2-204ENST00000428021 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
VRK2-204ENST00000428021 BCL11BQ9C0K0 894 aaPredicted RBP22.76■■□□□ 1.23
VRK2-204ENST00000428021 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms