RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 RREB1Q92766 1687 aa29.82■■■□□ 2.36
PCGF3-204ENST00000427463 ABCC6O95255 1503 aa29.81■■■□□ 2.36
PCGF3-204ENST00000427463 WDR17Q8IZU2 1322 aa29.81■■■□□ 2.36
PCGF3-204ENST00000427463 SBF2Q86WG5 1849 aa29.81■■■□□ 2.36
PCGF3-204ENST00000427463 SOX12O15370 315 aa29.81■■■□□ 2.36
PCGF3-204ENST00000427463 LTN1O94822 1766 aa29.8■■■□□ 2.36
PCGF3-204ENST00000427463 USP31Q70CQ4 1352 aa29.79■■■□□ 2.36
PCGF3-204ENST00000427463 PSDA5PKW4 1024 aaPredicted RBP29.79■■■□□ 2.36
PCGF3-204ENST00000427463 EZH2Q15910 746 aaKnown RBP29.79■■■□□ 2.36
PCGF3-204ENST00000427463 TOM1L2Q6ZVM7 507 aa29.79■■■□□ 2.36
PCGF3-204ENST00000427463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.78■■■□□ 2.36
PCGF3-204ENST00000427463 TMC1Q8TDI8 760 aa29.78■■■□□ 2.36
PCGF3-204ENST00000427463 CAMKK2Q96RR4 588 aa29.78■■■□□ 2.36
PCGF3-204ENST00000427463 NUP188Q5SRE5 1749 aa29.77■■■□□ 2.36
PCGF3-204ENST00000427463 SLC12A5Q9H2X9 1139 aa29.77■■■□□ 2.36
PCGF3-204ENST00000427463 PARD3Q8TEW0 1356 aa29.77■■■□□ 2.36
PCGF3-204ENST00000427463 APBA3O96018 575 aa29.76■■■□□ 2.35
PCGF3-204ENST00000427463 EDC4Q6P2E9 1401 aaKnown RBP29.76■■■□□ 2.35
PCGF3-204ENST00000427463 OVOS2A0A0G2JMS6 1433 aa29.75■■■□□ 2.35
PCGF3-204ENST00000427463 OVOS2A0A0J9YW53 1432 aa29.75■■■□□ 2.35
PCGF3-204ENST00000427463 OVOS2Q6IE36 1432 aa29.75■■■□□ 2.35
PCGF3-204ENST00000427463 PUS7Q96PZ0 661 aaKnown RBP29.75■■■□□ 2.35
PCGF3-204ENST00000427463 A0A1W2PP64 1363 aa29.75■■■□□ 2.35
PCGF3-204ENST00000427463 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
PCGF3-204ENST00000427463 NME9Q86XW9 330 aa29.74■■■□□ 2.35
PCGF3-204ENST00000427463 TESK2Q96S53 571 aa29.74■■■□□ 2.35
PCGF3-204ENST00000427463 ST20-MTHFSA0A0A6YYL1 179 aa29.71■■■□□ 2.35
PCGF3-204ENST00000427463 DDB1Q16531 1140 aa29.71■■■□□ 2.35
PCGF3-204ENST00000427463 RGPD3A6NKT7 1758 aaPredicted RBP29.71■■■□□ 2.35
PCGF3-204ENST00000427463 RGPD4Q7Z3J3 1758 aa29.71■■■□□ 2.35
PCGF3-204ENST00000427463 C11orf95C9JLR9 678 aaPredicted RBP29.7■■■□□ 2.35
PCGF3-204ENST00000427463 CARD10Q9BWT7 1032 aa29.7■■■□□ 2.35
PCGF3-204ENST00000427463 TERF2IPQ9NYB0 399 aa29.7■■■□□ 2.35
PCGF3-204ENST00000427463 CSB-PGBD3P0DP91 1061 aa29.69■■■□□ 2.34
PCGF3-204ENST00000427463 R3HDM1Q15032 1099 aaKnown RBP29.69■■■□□ 2.34
PCGF3-204ENST00000427463 NINLQ9Y2I6 1382 aa29.68■■■□□ 2.34
PCGF3-204ENST00000427463 CDCA7Q9BWT1 371 aaPredicted RBP29.68■■■□□ 2.34
PCGF3-204ENST00000427463 CCDC7Q96M83 1385 aa29.64■■■□□ 2.34
PCGF3-204ENST00000427463 ERBB3P21860 1342 aa29.64■■■□□ 2.34
PCGF3-204ENST00000427463 BCL9O00512 1426 aa29.62■■■□□ 2.33
PCGF3-204ENST00000427463 MARCH10Q8NA82 808 aaPredicted RBP29.62■■■□□ 2.33
PCGF3-204ENST00000427463 SLC24A1O60721 1099 aa29.61■■■□□ 2.33
PCGF3-204ENST00000427463 USP47Q96K76 1375 aa29.61■■■□□ 2.33
PCGF3-204ENST00000427463 TNS2Q63HR2 1409 aa29.6■■■□□ 2.33
PCGF3-204ENST00000427463 FAM208AQ9UK61 1670 aaKnown RBP29.57■■■□□ 2.32
PCGF3-204ENST00000427463 PTF1AQ7RTS3 328 aa29.57■■■□□ 2.32
PCGF3-204ENST00000427463 BCL11BQ9C0K0 894 aaPredicted RBP29.56■■■□□ 2.32
PCGF3-204ENST00000427463 ANKRD36BQ8N2N9 1353 aa29.55■■■□□ 2.32
PCGF3-204ENST00000427463 EXOC5O00471 708 aa29.54■■■□□ 2.32
PCGF3-204ENST00000427463 ANKRD24Q8TF21 1146 aa29.54■■■□□ 2.32
PCGF3-204ENST00000427463 NLRP2Q9NX02 1062 aa29.54■■■□□ 2.32
PCGF3-204ENST00000427463 PLSCR1O15162 318 aa29.53■■■□□ 2.32
PCGF3-204ENST00000427463 NBPF14Q5TI25 921 aa29.53■■■□□ 2.32
PCGF3-204ENST00000427463 NHSQ6T4R5 1651 aa29.53■■■□□ 2.32
PCGF3-204ENST00000427463 TMF1P82094 1093 aa29.51■■■□□ 2.31
PCGF3-204ENST00000427463 IP6K1Q92551 441 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 COG3Q96JB2 828 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 KIF20BQ96Q89 1820 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 MYOM1P52179 1685 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 KAT6BQ8WYB5 2073 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 RGPD2P0DJD1 1756 aa29.49■■■□□ 2.31
PCGF3-204ENST00000427463 IL2RBP14784 551 aa29.48■■■□□ 2.31
PCGF3-204ENST00000427463 MAP3K19Q56UN5 1328 aa29.45■■■□□ 2.31
PCGF3-204ENST00000427463 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.3
PCGF3-204ENST00000427463 TIMELESSQ9UNS1 1208 aa29.44■■■□□ 2.3
PCGF3-204ENST00000427463 CASZ1Q86V15 1759 aa29.44■■■□□ 2.3
PCGF3-204ENST00000427463 BTAF1O14981 1849 aa29.43■■■□□ 2.3
PCGF3-204ENST00000427463 PROM2Q8N271 834 aa29.43■■■□□ 2.3
PCGF3-204ENST00000427463 ANO8Q9HCE9 1232 aaPredicted RBP29.43■■■□□ 2.3
PCGF3-204ENST00000427463 FBLN1P23142 703 aa29.42■■■□□ 2.3
PCGF3-204ENST00000427463 KCNQ2O43526 872 aa29.41■■■□□ 2.3
PCGF3-204ENST00000427463 HOXC9P31274 260 aa29.41■■■□□ 2.3
PCGF3-204ENST00000427463 FYB1O15117 783 aa29.4■■■□□ 2.3
PCGF3-204ENST00000427463 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
PCGF3-204ENST00000427463 LTV1Q96GA3 475 aaPredicted RBP29.4■■■□□ 2.3
PCGF3-204ENST00000427463 PCGF6Q9BYE7 350 aa29.39■■■□□ 2.3
PCGF3-204ENST00000427463 SHANK3Q9BYB0 1731 aa29.39■■■□□ 2.3
PCGF3-204ENST00000427463 RTL1A6NKG5 1358 aa29.39■■■□□ 2.29
PCGF3-204ENST00000427463 AMPHP49418 695 aa29.38■■■□□ 2.29
PCGF3-204ENST00000427463 GGNBP2Q9H3C7 697 aa29.38■■■□□ 2.29
PCGF3-204ENST00000427463 ACSBG1Q96GR2 724 aa29.37■■■□□ 2.29
PCGF3-204ENST00000427463 TXNRD1Q16881 649 aa29.36■■■□□ 2.29
PCGF3-204ENST00000427463 RRS1Q15050 365 aaKnown RBP29.34■■■□□ 2.29
PCGF3-204ENST00000427463 SPON1Q9HCB6 807 aa29.33■■■□□ 2.29
PCGF3-204ENST00000427463 PAPPAQ13219 1627 aa29.33■■■□□ 2.29
PCGF3-204ENST00000427463 DOT1LQ8TEK3 1739 aa29.32■■■□□ 2.28
PCGF3-204ENST00000427463 MEGF6O75095 1541 aa29.3■■■□□ 2.28
PCGF3-204ENST00000427463 NSD3Q9BZ95 1437 aa29.29■■■□□ 2.28
PCGF3-204ENST00000427463 CARD14Q9BXL6 1004 aa29.29■■■□□ 2.28
PCGF3-204ENST00000427463 DDX54Q8TDD1 881 aaKnown RBP29.28■■■□□ 2.28
PCGF3-204ENST00000427463 PDGFDQ9GZP0 370 aaPredicted RBP29.28■■■□□ 2.28
PCGF3-204ENST00000427463 ANKRD26Q9UPS8 1709 aa29.26■■■□□ 2.27
PCGF3-204ENST00000427463 STK32BQ9NY57 414 aa29.26■■■□□ 2.27
PCGF3-204ENST00000427463 SMG6Q86US8 1419 aaKnown RBP29.26■■■□□ 2.27
PCGF3-204ENST00000427463 SLC15A2Q16348 729 aa29.24■■■□□ 2.27
PCGF3-204ENST00000427463 NBPF6Q5VWK0 638 aa29.24■■■□□ 2.27
PCGF3-204ENST00000427463 NBPF4Q96M43 638 aa29.24■■■□□ 2.27
PCGF3-204ENST00000427463 INSRP06213 1382 aa29.24■■■□□ 2.27
PCGF3-204ENST00000427463 FLT4P35916 1363 aa29.24■■■□□ 2.27
PCGF3-204ENST00000427463 KIF24Q5T7B8 1368 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms