RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
LSG1-202ENST00000427461 AKAP12Q02952 1782 aa13.84□□□□□ -0.19
LSG1-202ENST00000427461 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
LSG1-202ENST00000427461 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
LSG1-202ENST00000427461 CPDO75976 1380 aa13.83□□□□□ -0.19
LSG1-202ENST00000427461 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
LSG1-202ENST00000427461 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
LSG1-202ENST00000427461 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
LSG1-202ENST00000427461 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
LSG1-202ENST00000427461 WNK3Q9BYP7 1800 aa13.81□□□□□ -0.2
LSG1-202ENST00000427461 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
LSG1-202ENST00000427461 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
LSG1-202ENST00000427461 TOPAZ1Q8N9V7 1692 aa13.81□□□□□ -0.2
LSG1-202ENST00000427461 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
LSG1-202ENST00000427461 BCL9O00512 1426 aa13.81□□□□□ -0.2
LSG1-202ENST00000427461 TOM1L2Q6ZVM7 507 aa13.8□□□□□ -0.2
LSG1-202ENST00000427461 PPARGC1BQ86YN6 1023 aaKnown RBP13.8□□□□□ -0.2
LSG1-202ENST00000427461 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
LSG1-202ENST00000427461 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
LSG1-202ENST00000427461 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
LSG1-202ENST00000427461 GCP02774 474 aa13.79□□□□□ -0.2
LSG1-202ENST00000427461 USP19O94966 1318 aa13.79□□□□□ -0.2
LSG1-202ENST00000427461 POLD1P28340 1107 aa13.78□□□□□ -0.2
LSG1-202ENST00000427461 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
LSG1-202ENST00000427461 ACEP12821 1306 aa13.78□□□□□ -0.2
LSG1-202ENST00000427461 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
LSG1-202ENST00000427461 ADGRB1O14514 1584 aa13.77□□□□□ -0.21
LSG1-202ENST00000427461 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
LSG1-202ENST00000427461 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
LSG1-202ENST00000427461 POLR3AO14802 1390 aaPredicted RBP13.75□□□□□ -0.21
LSG1-202ENST00000427461 ADCY9O60503 1353 aa13.75□□□□□ -0.21
LSG1-202ENST00000427461 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
LSG1-202ENST00000427461 KIF3CO14782 793 aa13.74□□□□□ -0.21
LSG1-202ENST00000427461 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
LSG1-202ENST00000427461 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 APLP1P51693 650 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 PRELPP51888 382 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 TUBGCP6Q96RT7 1819 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 COL18A1P39060 1754 aa13.73□□□□□ -0.21
LSG1-202ENST00000427461 WDR17Q8IZU2 1322 aa13.72□□□□□ -0.21
LSG1-202ENST00000427461 BTAF1O14981 1849 aa13.72□□□□□ -0.21
LSG1-202ENST00000427461 EXOC5O00471 708 aa13.72□□□□□ -0.21
LSG1-202ENST00000427461 QSER1Q2KHR3 1735 aa13.72□□□□□ -0.21
LSG1-202ENST00000427461 RGPD5Q99666 1765 aa13.71□□□□□ -0.21
LSG1-202ENST00000427461 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
LSG1-202ENST00000427461 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
LSG1-202ENST00000427461 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
LSG1-202ENST00000427461 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
LSG1-202ENST00000427461 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
LSG1-202ENST00000427461 KCNQ4P56696 695 aa13.69□□□□□ -0.22
LSG1-202ENST00000427461 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
LSG1-202ENST00000427461 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
LSG1-202ENST00000427461 USP6P35125 1406 aa13.69□□□□□ -0.22
LSG1-202ENST00000427461 BRD4O60885 1362 aaPredicted RBP13.69□□□□□ -0.22
LSG1-202ENST00000427461 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
LSG1-202ENST00000427461 SLC34A2O95436 690 aa13.68□□□□□ -0.22
LSG1-202ENST00000427461 HTRA3P83110 453 aa13.68□□□□□ -0.22
LSG1-202ENST00000427461 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
LSG1-202ENST00000427461 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
LSG1-202ENST00000427461 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
LSG1-202ENST00000427461 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
LSG1-202ENST00000427461 SLIT3O75094 1523 aa13.66□□□□□ -0.22
LSG1-202ENST00000427461 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
LSG1-202ENST00000427461 NLRP6P59044 892 aa13.66□□□□□ -0.22
LSG1-202ENST00000427461 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
LSG1-202ENST00000427461 PCNTO95613 3336 aa13.65□□□□□ -0.22
LSG1-202ENST00000427461 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
LSG1-202ENST00000427461 MSH5O43196 834 aa13.63□□□□□ -0.23
LSG1-202ENST00000427461 KCNA4P22459 653 aa13.63□□□□□ -0.23
LSG1-202ENST00000427461 KLRG1Q96E93 195 aa13.63□□□□□ -0.23
LSG1-202ENST00000427461 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
LSG1-202ENST00000427461 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
LSG1-202ENST00000427461 SOX12O15370 315 aa13.62□□□□□ -0.23
LSG1-202ENST00000427461 TOMM70O94826 608 aa13.62□□□□□ -0.23
LSG1-202ENST00000427461 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
LSG1-202ENST00000427461 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
LSG1-202ENST00000427461 CPSF1Q10570 1443 aaKnown RBP13.62□□□□□ -0.23
LSG1-202ENST00000427461 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
LSG1-202ENST00000427461 ABCC6O95255 1503 aa13.61□□□□□ -0.23
LSG1-202ENST00000427461 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
LSG1-202ENST00000427461 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
LSG1-202ENST00000427461 CCDC7Q96M83 1385 aa13.6□□□□□ -0.23
LSG1-202ENST00000427461 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
LSG1-202ENST00000427461 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
LSG1-202ENST00000427461 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
LSG1-202ENST00000427461 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
LSG1-202ENST00000427461 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
LSG1-202ENST00000427461 LY75O60449 1722 aa13.56□□□□□ -0.24
LSG1-202ENST00000427461 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
LSG1-202ENST00000427461 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
LSG1-202ENST00000427461 IL2RBP14784 551 aa13.55□□□□□ -0.24
LSG1-202ENST00000427461 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
LSG1-202ENST00000427461 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
LSG1-202ENST00000427461 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
LSG1-202ENST00000427461 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
LSG1-202ENST00000427461 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
LSG1-202ENST00000427461 HSPA1AP0DMV8 641 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms