RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 CRB1P82279 1406 aa15.04■□□□□ -0
LINC01238-202ENST00000426962 PDE3BQ13370 1112 aa15.04■□□□□ -0
LINC01238-202ENST00000426962 FAM182BQ5T319 152 aa15.04■□□□□ -0
LINC01238-202ENST00000426962 MON2Q7Z3U7 1717 aa15.03■□□□□ -0
LINC01238-202ENST00000426962 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
LINC01238-202ENST00000426962 WDR17Q8IZU2 1322 aa15.02■□□□□ -0
LINC01238-202ENST00000426962 DEFB132Q7Z7B7 95 aa15.02■□□□□ -0
LINC01238-202ENST00000426962 THSD7AQ9UPZ6 1657 aa15.02□□□□□ -0.01
LINC01238-202ENST00000426962 ANKRD36BQ8N2N9 1353 aa15.01□□□□□ -0.01
LINC01238-202ENST00000426962 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
LINC01238-202ENST00000426962 COG3Q96JB2 828 aa15.01□□□□□ -0.01
LINC01238-202ENST00000426962 COL18A1P39060 1754 aa15.01□□□□□ -0.01
LINC01238-202ENST00000426962 BAG6P46379 1132 aa15□□□□□ -0.01
LINC01238-202ENST00000426962 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
LINC01238-202ENST00000426962 NFAT5O94916 1531 aa15□□□□□ -0.01
LINC01238-202ENST00000426962 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
LINC01238-202ENST00000426962 CDCA7Q9BWT1 371 aaPredicted RBP14.99□□□□□ -0.01
LINC01238-202ENST00000426962 C11orf95C9JLR9 678 aaPredicted RBP14.98□□□□□ -0.01
LINC01238-202ENST00000426962 FYB1O15117 783 aa14.98□□□□□ -0.01
LINC01238-202ENST00000426962 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
LINC01238-202ENST00000426962 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
LINC01238-202ENST00000426962 TRIM37O94972 964 aa14.97□□□□□ -0.01
LINC01238-202ENST00000426962 DDB1Q16531 1140 aa14.97□□□□□ -0.01
LINC01238-202ENST00000426962 IP6K1Q92551 441 aa14.97□□□□□ -0.01
LINC01238-202ENST00000426962 USP54Q70EL1 1684 aa14.96□□□□□ -0.01
LINC01238-202ENST00000426962 HSPA5P11021 654 aaKnown RBP14.95□□□□□ -0.02
LINC01238-202ENST00000426962 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
LINC01238-202ENST00000426962 ANKRD24Q8TF21 1146 aa14.95□□□□□ -0.02
LINC01238-202ENST00000426962 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
LINC01238-202ENST00000426962 ABCC6O95255 1503 aa14.95□□□□□ -0.02
LINC01238-202ENST00000426962 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
LINC01238-202ENST00000426962 ERBB3P21860 1342 aa14.94□□□□□ -0.02
LINC01238-202ENST00000426962 EXOC5O00471 708 aa14.94□□□□□ -0.02
LINC01238-202ENST00000426962 FBLN1P23142 703 aa14.94□□□□□ -0.02
LINC01238-202ENST00000426962 CARD14Q9BXL6 1004 aa14.94□□□□□ -0.02
LINC01238-202ENST00000426962 NLRP2Q9NX02 1062 aa14.94□□□□□ -0.02
LINC01238-202ENST00000426962 APBA3O96018 575 aa14.93□□□□□ -0.02
LINC01238-202ENST00000426962 AMPHP49418 695 aa14.93□□□□□ -0.02
LINC01238-202ENST00000426962 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
LINC01238-202ENST00000426962 POLR3GLQ9BT43 218 aa14.92□□□□□ -0.02
LINC01238-202ENST00000426962 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
LINC01238-202ENST00000426962 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
LINC01238-202ENST00000426962 HOXC9P31274 260 aa14.91□□□□□ -0.02
LINC01238-202ENST00000426962 EZH2Q15910 746 aaKnown RBP14.91□□□□□ -0.02
LINC01238-202ENST00000426962 MARCH10Q8NA82 808 aaPredicted RBP14.91□□□□□ -0.02
LINC01238-202ENST00000426962 CAMKK2Q96RR4 588 aa14.91□□□□□ -0.02
LINC01238-202ENST00000426962 DISP2A7MBM2 1401 aa14.91□□□□□ -0.02
LINC01238-202ENST00000426962 IL2RBP14784 551 aa14.9□□□□□ -0.02
LINC01238-202ENST00000426962 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
LINC01238-202ENST00000426962 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
LINC01238-202ENST00000426962 RRS1Q15050 365 aaKnown RBP14.89□□□□□ -0.03
LINC01238-202ENST00000426962 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
LINC01238-202ENST00000426962 LTN1O94822 1766 aa14.88□□□□□ -0.03
LINC01238-202ENST00000426962 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
LINC01238-202ENST00000426962 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
LINC01238-202ENST00000426962 CGNL1Q0VF96 1302 aa14.87□□□□□ -0.03
LINC01238-202ENST00000426962 PARD3Q8TEW0 1356 aa14.86□□□□□ -0.03
LINC01238-202ENST00000426962 BCL9O00512 1426 aa14.86□□□□□ -0.03
LINC01238-202ENST00000426962 PLSCR1O15162 318 aa14.85□□□□□ -0.03
LINC01238-202ENST00000426962 PANK3Q9H999 370 aa14.85□□□□□ -0.03
LINC01238-202ENST00000426962 RTL1A6NKG5 1358 aa14.85□□□□□ -0.03
LINC01238-202ENST00000426962 LRRC37A3O60309 1634 aa14.84□□□□□ -0.03
LINC01238-202ENST00000426962 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
LINC01238-202ENST00000426962 KIF24Q5T7B8 1368 aa14.84□□□□□ -0.03
LINC01238-202ENST00000426962 MYOM1P52179 1685 aa14.84□□□□□ -0.03
LINC01238-202ENST00000426962 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.03
LINC01238-202ENST00000426962 PSDA5PKW4 1024 aaPredicted RBP14.83□□□□□ -0.04
LINC01238-202ENST00000426962 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
LINC01238-202ENST00000426962 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
LINC01238-202ENST00000426962 PEAK1Q9H792 1746 aa14.83□□□□□ -0.04
LINC01238-202ENST00000426962 TNS2Q63HR2 1409 aa14.83□□□□□ -0.04
LINC01238-202ENST00000426962 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
LINC01238-202ENST00000426962 PTF1AQ7RTS3 328 aa14.82□□□□□ -0.04
LINC01238-202ENST00000426962 INSRP06213 1382 aa14.82□□□□□ -0.04
LINC01238-202ENST00000426962 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
LINC01238-202ENST00000426962 R3HDM1Q15032 1099 aaKnown RBP14.81□□□□□ -0.04
LINC01238-202ENST00000426962 EMILIN1Q9Y6C2 1016 aa14.81□□□□□ -0.04
LINC01238-202ENST00000426962 FLT4P35916 1363 aa14.81□□□□□ -0.04
LINC01238-202ENST00000426962 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
LINC01238-202ENST00000426962 KCNQ2O43526 872 aa14.8□□□□□ -0.04
LINC01238-202ENST00000426962 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
LINC01238-202ENST00000426962 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
LINC01238-202ENST00000426962 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
LINC01238-202ENST00000426962 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
LINC01238-202ENST00000426962 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
LINC01238-202ENST00000426962 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
LINC01238-202ENST00000426962 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
LINC01238-202ENST00000426962 PROM2Q8N271 834 aa14.78□□□□□ -0.04
LINC01238-202ENST00000426962 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
LINC01238-202ENST00000426962 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
LINC01238-202ENST00000426962 FAM208AQ9UK61 1670 aaKnown RBP14.77□□□□□ -0.04
LINC01238-202ENST00000426962 SRCAPQ6ZRS2 3230 aa14.77□□□□□ -0.04
LINC01238-202ENST00000426962 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.05
LINC01238-202ENST00000426962 TNNT2P45379 298 aaPredicted RBP14.77□□□□□ -0.05
LINC01238-202ENST00000426962 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.05
LINC01238-202ENST00000426962 KNSTRNQ9Y448 316 aa14.77□□□□□ -0.05
LINC01238-202ENST00000426962 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
LINC01238-202ENST00000426962 TXNRD1Q16881 649 aa14.75□□□□□ -0.05
LINC01238-202ENST00000426962 NSD2O96028 1365 aa14.74□□□□□ -0.05
LINC01238-202ENST00000426962 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms