RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 AMPHP49418 695 aa17.17■□□□□ 0.34
SMIM12-203ENST00000426886 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
SMIM12-203ENST00000426886 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
SMIM12-203ENST00000426886 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
SMIM12-203ENST00000426886 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
SMIM12-203ENST00000426886 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
SMIM12-203ENST00000426886 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
SMIM12-203ENST00000426886 NFAT5O94916 1531 aa17.15■□□□□ 0.34
SMIM12-203ENST00000426886 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
SMIM12-203ENST00000426886 TOM1L2Q6ZVM7 507 aa17.15■□□□□ 0.34
SMIM12-203ENST00000426886 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
SMIM12-203ENST00000426886 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
SMIM12-203ENST00000426886 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
SMIM12-203ENST00000426886 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
SMIM12-203ENST00000426886 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
SMIM12-203ENST00000426886 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
SMIM12-203ENST00000426886 IP6K1Q92551 441 aa17.12■□□□□ 0.33
SMIM12-203ENST00000426886 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
SMIM12-203ENST00000426886 HOXC9P31274 260 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 EP400Q96L91 3159 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
SMIM12-203ENST00000426886 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
SMIM12-203ENST00000426886 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
SMIM12-203ENST00000426886 RGS12O14924 1447 aa17.1■□□□□ 0.33
SMIM12-203ENST00000426886 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
SMIM12-203ENST00000426886 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
SMIM12-203ENST00000426886 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
SMIM12-203ENST00000426886 LMO7Q8WWI1 1683 aa17.08■□□□□ 0.33
SMIM12-203ENST00000426886 GLI3P10071 1580 aa17.08■□□□□ 0.33
SMIM12-203ENST00000426886 ERBB3P21860 1342 aa17.08■□□□□ 0.33
SMIM12-203ENST00000426886 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.33
SMIM12-203ENST00000426886 NRAPQ86VF7 1730 aa17.08■□□□□ 0.32
SMIM12-203ENST00000426886 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
SMIM12-203ENST00000426886 COL18A1P39060 1754 aa17.06■□□□□ 0.32
SMIM12-203ENST00000426886 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.06■□□□□ 0.32
SMIM12-203ENST00000426886 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
SMIM12-203ENST00000426886 CRB1P82279 1406 aa17.06■□□□□ 0.32
SMIM12-203ENST00000426886 LTN1O94822 1766 aa17.06■□□□□ 0.32
SMIM12-203ENST00000426886 NSD2O96028 1365 aa17.06■□□□□ 0.32
SMIM12-203ENST00000426886 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
SMIM12-203ENST00000426886 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
SMIM12-203ENST00000426886 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
SMIM12-203ENST00000426886 CARD10Q9BWT7 1032 aa17.04■□□□□ 0.32
SMIM12-203ENST00000426886 FLT4P35916 1363 aa17.03■□□□□ 0.32
SMIM12-203ENST00000426886 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
SMIM12-203ENST00000426886 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.32
SMIM12-203ENST00000426886 SOCS7O14512 581 aa17.02■□□□□ 0.32
SMIM12-203ENST00000426886 CDK12Q9NYV4 1490 aaPredicted RBP17.02■□□□□ 0.31
SMIM12-203ENST00000426886 NBPF6Q5VWK0 638 aa17.01■□□□□ 0.31
SMIM12-203ENST00000426886 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
SMIM12-203ENST00000426886 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
SMIM12-203ENST00000426886 NBPF4Q96M43 638 aa17.01■□□□□ 0.31
SMIM12-203ENST00000426886 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
SMIM12-203ENST00000426886 MTHFSP49914 203 aa17.01■□□□□ 0.31
SMIM12-203ENST00000426886 RTL1A6NKG5 1358 aa17■□□□□ 0.31
SMIM12-203ENST00000426886 INSRP06213 1382 aa17■□□□□ 0.31
SMIM12-203ENST00000426886 PDE3BQ13370 1112 aa17■□□□□ 0.31
SMIM12-203ENST00000426886 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
SMIM12-203ENST00000426886 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
SMIM12-203ENST00000426886 DDB1Q16531 1140 aa16.98■□□□□ 0.31
SMIM12-203ENST00000426886 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
SMIM12-203ENST00000426886 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
SMIM12-203ENST00000426886 ABCC6O95255 1503 aa16.97■□□□□ 0.31
SMIM12-203ENST00000426886 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
SMIM12-203ENST00000426886 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.31
SMIM12-203ENST00000426886 IL2RBP14784 551 aa16.96■□□□□ 0.31
SMIM12-203ENST00000426886 EYA1Q99502 592 aa16.96■□□□□ 0.31
SMIM12-203ENST00000426886 EXOC5O00471 708 aa16.96■□□□□ 0.3
SMIM12-203ENST00000426886 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
SMIM12-203ENST00000426886 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMIM12-203ENST00000426886 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
SMIM12-203ENST00000426886 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
SMIM12-203ENST00000426886 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
SMIM12-203ENST00000426886 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
SMIM12-203ENST00000426886 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
SMIM12-203ENST00000426886 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
SMIM12-203ENST00000426886 RGPD2P0DJD1 1756 aa16.9■□□□□ 0.3
SMIM12-203ENST00000426886 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
SMIM12-203ENST00000426886 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
SMIM12-203ENST00000426886 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
SMIM12-203ENST00000426886 IL13P35225 146 aa16.89■□□□□ 0.29
SMIM12-203ENST00000426886 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
SMIM12-203ENST00000426886 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
SMIM12-203ENST00000426886 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
SMIM12-203ENST00000426886 TRIM37O94972 964 aa16.89■□□□□ 0.29
SMIM12-203ENST00000426886 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
SMIM12-203ENST00000426886 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
SMIM12-203ENST00000426886 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
SMIM12-203ENST00000426886 HMOX1P09601 288 aa16.88■□□□□ 0.29
SMIM12-203ENST00000426886 MEGF6O75095 1541 aa16.87■□□□□ 0.29
SMIM12-203ENST00000426886 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
SMIM12-203ENST00000426886 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
SMIM12-203ENST00000426886 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
SMIM12-203ENST00000426886 IGSF1Q8N6C5 1336 aa16.85■□□□□ 0.29
SMIM12-203ENST00000426886 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
SMIM12-203ENST00000426886 RALBP1Q15311 655 aa16.84■□□□□ 0.29
SMIM12-203ENST00000426886 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms