RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 COG3Q96JB2 828 aa23.9■■□□□ 1.42
LMCD1-204ENST00000426878 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
LMCD1-204ENST00000426878 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.42
LMCD1-204ENST00000426878 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
LMCD1-204ENST00000426878 THRAP3Q9Y2W1 955 aaKnown RBP23.88■■□□□ 1.41
LMCD1-204ENST00000426878 CRB1P82279 1406 aa23.87■■□□□ 1.41
LMCD1-204ENST00000426878 THSD7AQ9UPZ6 1657 aa23.87■■□□□ 1.41
LMCD1-204ENST00000426878 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
LMCD1-204ENST00000426878 TCP11L2Q8N4U5 519 aa23.86■■□□□ 1.41
LMCD1-204ENST00000426878 WDR17Q8IZU2 1322 aa23.86■■□□□ 1.41
LMCD1-204ENST00000426878 KRT27Q7Z3Y8 459 aa23.85■■□□□ 1.41
LMCD1-204ENST00000426878 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
LMCD1-204ENST00000426878 POLR3GLQ9BT43 218 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 LTN1O94822 1766 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 RGPD5Q99666 1765 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 GGNBP2Q9H3C7 697 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 A0A0G2JS52 829 aa23.83■■□□□ 1.4
LMCD1-204ENST00000426878 MYT1Q01538 1121 aa23.83■■□□□ 1.4
LMCD1-204ENST00000426878 KIF20BQ96Q89 1820 aa23.82■■□□□ 1.4
LMCD1-204ENST00000426878 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
LMCD1-204ENST00000426878 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 IP6K1Q92551 441 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 CARD10Q9BWT7 1032 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 BLMP54132 1417 aaPredicted RBP23.79■■□□□ 1.4
LMCD1-204ENST00000426878 ERBB3P21860 1342 aa23.79■■□□□ 1.4
LMCD1-204ENST00000426878 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
LMCD1-204ENST00000426878 CSB-PGBD3P0DP91 1061 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 PANK3Q9H999 370 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 FBLN1P23142 703 aa23.76■■□□□ 1.39
LMCD1-204ENST00000426878 PARP4Q9UKK3 1724 aaKnown RBP23.75■■□□□ 1.39
LMCD1-204ENST00000426878 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
LMCD1-204ENST00000426878 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
LMCD1-204ENST00000426878 ANKRD24Q8TF21 1146 aa23.74■■□□□ 1.39
LMCD1-204ENST00000426878 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
LMCD1-204ENST00000426878 HOXC9P31274 260 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 AMPHP49418 695 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 KIF24Q5T7B8 1368 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
LMCD1-204ENST00000426878 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
LMCD1-204ENST00000426878 DISP2A7MBM2 1401 aa23.7■■□□□ 1.39
LMCD1-204ENST00000426878 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.39
LMCD1-204ENST00000426878 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
LMCD1-204ENST00000426878 NSD2O96028 1365 aa23.69■■□□□ 1.38
LMCD1-204ENST00000426878 FAM196AQ6ZSG2 479 aa23.68■■□□□ 1.38
LMCD1-204ENST00000426878 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
LMCD1-204ENST00000426878 FAM208AQ9UK61 1670 aaKnown RBP23.68■■□□□ 1.38
LMCD1-204ENST00000426878 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 DDB1Q16531 1140 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 LRRC37A3O60309 1634 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 FLT4P35916 1363 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 INSRP06213 1382 aa23.65■■□□□ 1.38
LMCD1-204ENST00000426878 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
LMCD1-204ENST00000426878 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.37
LMCD1-204ENST00000426878 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
LMCD1-204ENST00000426878 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
LMCD1-204ENST00000426878 IL2RBP14784 551 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 EMILIN1Q9Y6C2 1016 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 MAP2P11137 1827 aaKnown RBP23.62■■□□□ 1.37
LMCD1-204ENST00000426878 EXOC5O00471 708 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
LMCD1-204ENST00000426878 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 OVOS2A0A0G2JMS6 1433 aa23.6■■□□□ 1.37
LMCD1-204ENST00000426878 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
LMCD1-204ENST00000426878 BCL9O00512 1426 aa23.59■■□□□ 1.37
LMCD1-204ENST00000426878 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
LMCD1-204ENST00000426878 MARCH10Q8NA82 808 aaPredicted RBP23.59■■□□□ 1.37
LMCD1-204ENST00000426878 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 NBPF6Q5VWK0 638 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 DEFB132Q7Z7B7 95 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 MORC1Q86VD1 984 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 NBPF4Q96M43 638 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 TRIM37O94972 964 aa23.56■■□□□ 1.36
LMCD1-204ENST00000426878 BAG6P46379 1132 aa23.56■■□□□ 1.36
LMCD1-204ENST00000426878 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
LMCD1-204ENST00000426878 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
LMCD1-204ENST00000426878 TNNT2P45379 298 aaPredicted RBP23.55■■□□□ 1.36
LMCD1-204ENST00000426878 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
LMCD1-204ENST00000426878 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
LMCD1-204ENST00000426878 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
LMCD1-204ENST00000426878 MEGF6O75095 1541 aa23.49■■□□□ 1.35
LMCD1-204ENST00000426878 APBA3O96018 575 aa23.49■■□□□ 1.35
LMCD1-204ENST00000426878 EN1Q05925 392 aaPredicted RBP23.49■■□□□ 1.35
LMCD1-204ENST00000426878 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
LMCD1-204ENST00000426878 RAPGEF4Q8WZA2 1011 aa23.48■■□□□ 1.35
LMCD1-204ENST00000426878 BCL11BQ9C0K0 894 aaPredicted RBP23.48■■□□□ 1.35
LMCD1-204ENST00000426878 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
LMCD1-204ENST00000426878 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
LMCD1-204ENST00000426878 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
LMCD1-204ENST00000426878 EIF4A2Q14240 407 aaKnown RBP23.46■■□□□ 1.35
LMCD1-204ENST00000426878 EYA1Q99502 592 aa23.46■■□□□ 1.35
LMCD1-204ENST00000426878 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
LMCD1-204ENST00000426878 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
LMCD1-204ENST00000426878 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms