RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
GACAT3-201ENST00000426539 LRP5O75197 1615 aa14.37□□□□□ -0.11
GACAT3-201ENST00000426539 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
GACAT3-201ENST00000426539 COL18A1P39060 1754 aa14.36□□□□□ -0.11
GACAT3-201ENST00000426539 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
GACAT3-201ENST00000426539 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
GACAT3-201ENST00000426539 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
GACAT3-201ENST00000426539 CD163L1Q9NR16 1453 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 PARP4Q9UKK3 1724 aaKnown RBP14.33□□□□□ -0.12
GACAT3-201ENST00000426539 AKAP12Q02952 1782 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 SOX12O15370 315 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 TOM1L2Q6ZVM7 507 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
GACAT3-201ENST00000426539 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
GACAT3-201ENST00000426539 NFAT5O94916 1531 aa14.32□□□□□ -0.12
GACAT3-201ENST00000426539 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
GACAT3-201ENST00000426539 RNF39Q9H2S5 420 aa14.32□□□□□ -0.12
GACAT3-201ENST00000426539 LRRC37A3O60309 1634 aa14.31□□□□□ -0.12
GACAT3-201ENST00000426539 PTF1AQ7RTS3 328 aa14.31□□□□□ -0.12
GACAT3-201ENST00000426539 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
GACAT3-201ENST00000426539 PEAK1Q9H792 1746 aa14.31□□□□□ -0.12
GACAT3-201ENST00000426539 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
GACAT3-201ENST00000426539 DDB1Q16531 1140 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 NME9Q86XW9 330 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
GACAT3-201ENST00000426539 OVOS2A0A0G2JMS6 1433 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 OVOS2A0A0J9YW53 1432 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 OVOS2Q6IE36 1432 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 RREB1Q92766 1687 aa14.3□□□□□ -0.12
GACAT3-201ENST00000426539 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
GACAT3-201ENST00000426539 CARD10Q9BWT7 1032 aa14.29□□□□□ -0.12
GACAT3-201ENST00000426539 SLC12A5Q9H2X9 1139 aa14.29□□□□□ -0.12
GACAT3-201ENST00000426539 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
GACAT3-201ENST00000426539 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
GACAT3-201ENST00000426539 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
GACAT3-201ENST00000426539 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.13
GACAT3-201ENST00000426539 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.13
GACAT3-201ENST00000426539 TMC1Q8TDI8 760 aa14.27□□□□□ -0.13
GACAT3-201ENST00000426539 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.13
GACAT3-201ENST00000426539 BCL9O00512 1426 aa14.26□□□□□ -0.13
GACAT3-201ENST00000426539 TESK2Q96S53 571 aa14.26□□□□□ -0.13
GACAT3-201ENST00000426539 ABCC6O95255 1503 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 RGPD5Q99666 1765 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 PLSCR1O15162 318 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 NBPF14Q5TI25 921 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
GACAT3-201ENST00000426539 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
GACAT3-201ENST00000426539 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
GACAT3-201ENST00000426539 CCDC7Q96M83 1385 aa14.24□□□□□ -0.13
GACAT3-201ENST00000426539 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
GACAT3-201ENST00000426539 PROM2Q8N271 834 aa14.24□□□□□ -0.13
GACAT3-201ENST00000426539 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
GACAT3-201ENST00000426539 ERBB3P21860 1342 aa14.23□□□□□ -0.13
GACAT3-201ENST00000426539 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
GACAT3-201ENST00000426539 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
GACAT3-201ENST00000426539 ST20-MTHFSA0A0A6YYL1 179 aa14.22□□□□□ -0.13
GACAT3-201ENST00000426539 EXOC5O00471 708 aa14.22□□□□□ -0.13
GACAT3-201ENST00000426539 TERF2IPQ9NYB0 399 aa14.21□□□□□ -0.13
GACAT3-201ENST00000426539 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
GACAT3-201ENST00000426539 KCNQ2O43526 872 aa14.2□□□□□ -0.14
GACAT3-201ENST00000426539 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
GACAT3-201ENST00000426539 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
GACAT3-201ENST00000426539 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
GACAT3-201ENST00000426539 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
GACAT3-201ENST00000426539 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
GACAT3-201ENST00000426539 PDGFDQ9GZP0 370 aaPredicted RBP14.19□□□□□ -0.14
GACAT3-201ENST00000426539 IL2RBP14784 551 aa14.18□□□□□ -0.14
GACAT3-201ENST00000426539 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
GACAT3-201ENST00000426539 FBLN1P23142 703 aa14.17□□□□□ -0.14
GACAT3-201ENST00000426539 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
GACAT3-201ENST00000426539 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
GACAT3-201ENST00000426539 IP6K1Q92551 441 aa14.17□□□□□ -0.14
GACAT3-201ENST00000426539 SPON1Q9HCB6 807 aa14.17□□□□□ -0.14
GACAT3-201ENST00000426539 NINLQ9Y2I6 1382 aa14.17□□□□□ -0.14
GACAT3-201ENST00000426539 ACSBG1Q96GR2 724 aa14.16□□□□□ -0.14
GACAT3-201ENST00000426539 LTN1O94822 1766 aa14.16□□□□□ -0.14
GACAT3-201ENST00000426539 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.14
GACAT3-201ENST00000426539 ANKRD36BQ8N2N9 1353 aa14.14□□□□□ -0.15
GACAT3-201ENST00000426539 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
GACAT3-201ENST00000426539 COG3Q96JB2 828 aa14.14□□□□□ -0.15
GACAT3-201ENST00000426539 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
GACAT3-201ENST00000426539 USP47Q96K76 1375 aa14.13□□□□□ -0.15
GACAT3-201ENST00000426539 HOXC9P31274 260 aa14.13□□□□□ -0.15
GACAT3-201ENST00000426539 NHSQ6T4R5 1651 aa14.13□□□□□ -0.15
GACAT3-201ENST00000426539 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
GACAT3-201ENST00000426539 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
GACAT3-201ENST00000426539 FYB1O15117 783 aa14.11□□□□□ -0.15
GACAT3-201ENST00000426539 ZBTB7AO95365 584 aa14.11□□□□□ -0.15
GACAT3-201ENST00000426539 PTGER2P43116 358 aa14.11□□□□□ -0.15
GACAT3-201ENST00000426539 TMF1P82094 1093 aa14.11□□□□□ -0.15
GACAT3-201ENST00000426539 STK32BQ9NY57 414 aa14.11□□□□□ -0.15
GACAT3-201ENST00000426539 PPP1R1BQ9UD71 204 aaPredicted RBP14.11□□□□□ -0.15
GACAT3-201ENST00000426539 GGNBP2Q9H3C7 697 aa14.1□□□□□ -0.15
GACAT3-201ENST00000426539 AMPHP49418 695 aa14.09□□□□□ -0.15
GACAT3-201ENST00000426539 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
GACAT3-201ENST00000426539 DDX54Q8TDD1 881 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms