RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 L3MBTL2Q969R5 705 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 TRIM52Q96A61 297 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 CDK11AQ9UQ88 783 aaPredicted RBP3.85□□□□□ -1.79
LINC00407-201ENST00000426509 TRAPPC8Q9Y2L5 1435 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 ATP10AO60312 1499 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 ARHGEF5Q12774 1597 aa3.85□□□□□ -1.79
LINC00407-201ENST00000426509 SETD1AO15047 1707 aaKnown RBP3.84□□□□□ -1.79
LINC00407-201ENST00000426509 ACTN4O43707 911 aaKnown RBP3.84□□□□□ -1.79
LINC00407-201ENST00000426509 TOM1O60784 492 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 HSPA5P11021 654 aaKnown RBP3.84□□□□□ -1.79
LINC00407-201ENST00000426509 NBPF8Q3BBV2 869 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 IL21Q9HBE4 155 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 CFDP1Q9UEE9 299 aaPredicted RBP3.84□□□□□ -1.79
LINC00407-201ENST00000426509 DAXXQ9UER7 740 aaPredicted RBP3.84□□□□□ -1.79
LINC00407-201ENST00000426509 WASHC2AQ641Q2 1341 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 C9orf84Q5VXU9 1444 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 SPATA31E1Q6ZUB1 1445 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 KIAA1107Q9UPP5 1409 aa3.84□□□□□ -1.79
LINC00407-201ENST00000426509 SAMD9LQ8IVG5 1584 aa3.84□□□□□ -1.8
LINC00407-201ENST00000426509 PREX2Q70Z35 1606 aa3.84□□□□□ -1.8
LINC00407-201ENST00000426509 COPS2P61201 443 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 MAP2K5Q13163 448 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 BLOC1S3Q6QNY0 202 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 AFAP1Q8N556 730 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 SUPT16HQ9Y5B9 1047 aaKnown RBP3.83□□□□□ -1.8
LINC00407-201ENST00000426509 MINK1Q8N4C8 1332 aaPredicted RBP3.83□□□□□ -1.8
LINC00407-201ENST00000426509 ANKRD30AQ9BXX3 1397 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 SCAPERQ9BY12 1400 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 CNTLNQ9NXG0 1405 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 ANKRD50Q9ULJ7 1429 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 CDC42BPBQ9Y5S2 1711 aa3.83□□□□□ -1.8
LINC00407-201ENST00000426509 POLR1AO95602 1720 aaPredicted RBP3.82□□□□□ -1.8
LINC00407-201ENST00000426509 MAST1Q9Y2H9 1570 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 MAGI2Q86UL8 1455 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 CCDC7Q96M83 1385 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 PLEKHD1A6NEE1 506 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 C11orf95C9JLR9 678 aaPredicted RBP3.82□□□□□ -1.8
LINC00407-201ENST00000426509 ANP32CO43423 234 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 ZPR1O75312 459 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 CFHP08603 1231 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 NECTIN2Q92692 538 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 CCDC102AQ96A19 550 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 TMUB1Q9BVT8 246 aa3.82□□□□□ -1.8
LINC00407-201ENST00000426509 C3P01024 1663 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 UNC13BO14795 1591 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC00407-201ENST00000426509 CCDC141Q6ZP82 1450 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 KIF15Q9NS87 1388 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 GCGRP47871 477 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 EIF4G2P78344 907 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC00407-201ENST00000426509 PPP1R18Q6NYC8 613 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 REPIN1Q9BWE0 567 aaKnown RBP3.81□□□□□ -1.8
LINC00407-201ENST00000426509 ZNF777Q9ULD5 760 aaPredicted RBP3.81□□□□□ -1.8
LINC00407-201ENST00000426509 PCDHB3Q9Y5E6 796 aa3.81□□□□□ -1.8
LINC00407-201ENST00000426509 KDM5CP41229 1560 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 SYCP2Q9BX26 1530 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 RALGAPBQ86X10 1494 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 ZMYM3Q14202 1370 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 KIF7Q2M1P5 1343 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 DDX11L8A8MPP1 907 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 CD46P15529 392 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 BRPF1P55201 1214 aaPredicted RBP3.8□□□□□ -1.8
LINC00407-201ENST00000426509 PUS10Q3MIT2 529 aaKnown RBP3.8□□□□□ -1.8
LINC00407-201ENST00000426509 KMT5BQ4FZB7 885 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 SCUBE3Q8IX30 993 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 KRI1Q8N9T8 703 aaKnown RBP3.8□□□□□ -1.8
LINC00407-201ENST00000426509 PLXNC1O60486 1568 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 FAM135AQ9P2D6 1515 aa3.8□□□□□ -1.8
LINC00407-201ENST00000426509 PLA2R1Q13018 1463 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 NUP155O75694 1391 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 TRIM66O15016 1216 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 TLL1O43897 1013 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 SLC4A3P48751 1232 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 HNRNPMP52272 730 aaKnown RBP eCLIP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 MDM2Q00987 491 aaPredicted RBP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 LAPTM4AQ15012 233 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 MORN1Q5T089 497 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 Q6ZNB5 142 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 EMID1Q96A84 441 aaPredicted RBP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 AK7Q96M32 723 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 PRR14Q9BWN1 585 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 GPBP1L1Q9HC44 474 aaPredicted RBP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.79□□□□□ -1.8
LINC00407-201ENST00000426509 VWDEQ8N2E2 1590 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 NEURL4Q96JN8 1562 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 ARHGAP5Q13017 1502 aa3.79□□□□□ -1.8
LINC00407-201ENST00000426509 PLCH2O75038 1416 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 MYO5CQ9NQX4 1742 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 USP47Q96K76 1375 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 IQGAP3Q86VI3 1631 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 DIP2CQ9Y2E4 1556 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 SETBP1Q9Y6X0 1596 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 FUT2Q10981 343 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 CCDC184Q52MB2 194 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 RDH13Q8NBN7 331 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 THAP11Q96EK4 314 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 SRCAPQ6ZRS2 3230 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 CPS1P31327 1500 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 ABCC1P33527 1531 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms