RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 WIPF1O43516 503 aa10.55□□□□□ -0.72
LINC00993-202ENST00000426471 PTK2Q05397 1052 aa10.55□□□□□ -0.72
LINC00993-202ENST00000426471 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
LINC00993-202ENST00000426471 PCMTD1Q96MG8 357 aaPredicted RBP10.55□□□□□ -0.72
LINC00993-202ENST00000426471 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
LINC00993-202ENST00000426471 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
LINC00993-202ENST00000426471 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
LINC00993-202ENST00000426471 IRF7Q92985 503 aa10.54□□□□□ -0.72
LINC00993-202ENST00000426471 MEIOBQ8N635 442 aa10.53□□□□□ -0.72
LINC00993-202ENST00000426471 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
LINC00993-202ENST00000426471 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
LINC00993-202ENST00000426471 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
LINC00993-202ENST00000426471 KCTD15Q96SI1 283 aaPredicted RBP10.51□□□□□ -0.73
LINC00993-202ENST00000426471 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
LINC00993-202ENST00000426471 H3BM21 787 aa10.5□□□□□ -0.73
LINC00993-202ENST00000426471 RFC5P40937 340 aa10.5□□□□□ -0.73
LINC00993-202ENST00000426471 PPP1R26Q5T8A7 1209 aaPredicted RBP10.5□□□□□ -0.73
LINC00993-202ENST00000426471 DHX9Q08211 1270 aaKnown RBP10.49□□□□□ -0.73
LINC00993-202ENST00000426471 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
LINC00993-202ENST00000426471 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
LINC00993-202ENST00000426471 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
LINC00993-202ENST00000426471 GMPRP36959 345 aa10.48□□□□□ -0.73
LINC00993-202ENST00000426471 ADAM32Q8TC27 787 aa10.48□□□□□ -0.73
LINC00993-202ENST00000426471 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
LINC00993-202ENST00000426471 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
LINC00993-202ENST00000426471 GPSM3Q9Y4H4 160 aa10.48□□□□□ -0.73
LINC00993-202ENST00000426471 RAB15P59190 212 aa10.47□□□□□ -0.73
LINC00993-202ENST00000426471 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
LINC00993-202ENST00000426471 CBLBQ13191 982 aa10.46□□□□□ -0.73
LINC00993-202ENST00000426471 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
LINC00993-202ENST00000426471 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
LINC00993-202ENST00000426471 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
LINC00993-202ENST00000426471 INTS6LQ5JSJ4 861 aaKnown RBP10.44□□□□□ -0.74
LINC00993-202ENST00000426471 SOS2Q07890 1332 aaPredicted RBP10.43□□□□□ -0.74
LINC00993-202ENST00000426471 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
LINC00993-202ENST00000426471 TTLL8A6PVC2 850 aa10.43□□□□□ -0.74
LINC00993-202ENST00000426471 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
LINC00993-202ENST00000426471 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
LINC00993-202ENST00000426471 DNMT3LQ9UJW3 386 aa10.42□□□□□ -0.74
LINC00993-202ENST00000426471 FIGNL2A6NMB9 653 aa10.41□□□□□ -0.74
LINC00993-202ENST00000426471 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.41□□□□□ -0.74
LINC00993-202ENST00000426471 RELBQ01201 579 aa10.4□□□□□ -0.74
LINC00993-202ENST00000426471 Q6ZVU0 165 aa10.4□□□□□ -0.74
LINC00993-202ENST00000426471 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
LINC00993-202ENST00000426471 ZSCAN1Q8NBB4 408 aa10.39□□□□□ -0.75
LINC00993-202ENST00000426471 AGBL1Q96MI9 1066 aa10.39□□□□□ -0.75
LINC00993-202ENST00000426471 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
LINC00993-202ENST00000426471 SPINT1O43278 529 aa10.37□□□□□ -0.75
LINC00993-202ENST00000426471 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
LINC00993-202ENST00000426471 POLMQ9NP87 494 aaPredicted RBP10.37□□□□□ -0.75
LINC00993-202ENST00000426471 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
LINC00993-202ENST00000426471 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
LINC00993-202ENST00000426471 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
LINC00993-202ENST00000426471 TRIM52Q96A61 297 aa10.36□□□□□ -0.75
LINC00993-202ENST00000426471 ZNF395Q9H8N7 513 aaPredicted RBP10.35□□□□□ -0.75
LINC00993-202ENST00000426471 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
LINC00993-202ENST00000426471 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
LINC00993-202ENST00000426471 PTSQ03393 145 aa10.34□□□□□ -0.75
LINC00993-202ENST00000426471 INSM2Q96T92 566 aaPredicted RBP10.34□□□□□ -0.75
LINC00993-202ENST00000426471 VSIG8P0DPA2 414 aa10.33□□□□□ -0.76
LINC00993-202ENST00000426471 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
LINC00993-202ENST00000426471 ADH1AP07327 375 aa10.32□□□□□ -0.76
LINC00993-202ENST00000426471 CTSOP43234 321 aaPredicted RBP10.32□□□□□ -0.76
LINC00993-202ENST00000426471 SEPT12Q8IYM1 358 aa10.31□□□□□ -0.76
LINC00993-202ENST00000426471 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
LINC00993-202ENST00000426471 ESPNB1AK53 854 aa10.3□□□□□ -0.76
LINC00993-202ENST00000426471 FBXO45P0C2W1 286 aa10.3□□□□□ -0.76
LINC00993-202ENST00000426471 CCDC155Q8N6L0 562 aa10.3□□□□□ -0.76
LINC00993-202ENST00000426471 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
LINC00993-202ENST00000426471 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
LINC00993-202ENST00000426471 APBB1O00213 710 aa10.28□□□□□ -0.76
LINC00993-202ENST00000426471 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
LINC00993-202ENST00000426471 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
LINC00993-202ENST00000426471 PTGIRP43119 386 aa10.28□□□□□ -0.76
LINC00993-202ENST00000426471 BANK1Q8NDB2 785 aa10.28□□□□□ -0.76
LINC00993-202ENST00000426471 LILRA1O75019 489 aa10.27□□□□□ -0.77
LINC00993-202ENST00000426471 CDC14CA4D256 554 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 NR1H3Q13133 447 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
LINC00993-202ENST00000426471 NDUFB9Q9Y6M9 179 aa10.26□□□□□ -0.77
LINC00993-202ENST00000426471 SLC35F4A4IF30 521 aa10.24□□□□□ -0.77
LINC00993-202ENST00000426471 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
LINC00993-202ENST00000426471 MCCD1P59942 119 aaPredicted RBP10.24□□□□□ -0.77
LINC00993-202ENST00000426471 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
LINC00993-202ENST00000426471 CNTNAP3Q9BZ76 1288 aa10.24□□□□□ -0.77
LINC00993-202ENST00000426471 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
LINC00993-202ENST00000426471 MEN1O00255 615 aa10.23□□□□□ -0.77
LINC00993-202ENST00000426471 LYSMD3Q7Z3D4 306 aa10.23□□□□□ -0.77
LINC00993-202ENST00000426471 CCDC125Q86Z20 511 aa10.23□□□□□ -0.77
LINC00993-202ENST00000426471 ITGA6P23229 1130 aa10.22□□□□□ -0.77
LINC00993-202ENST00000426471 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
LINC00993-202ENST00000426471 VWA5B2Q8N398 1253 aa10.22□□□□□ -0.77
LINC00993-202ENST00000426471 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
LINC00993-202ENST00000426471 MTMR14Q8NCE2 650 aa10.22□□□□□ -0.77
LINC00993-202ENST00000426471 FOXD4L5Q5VV16 416 aaPredicted RBP10.21□□□□□ -0.77
LINC00993-202ENST00000426471 CC2D2BQ6DHV5 1058 aa10.21□□□□□ -0.77
LINC00993-202ENST00000426471 PRICKLE2Q7Z3G6 844 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms