RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 AXIN2Q9Y2T1 843 aa21.17■□□□□ 0.98
PDAP1-202ENST00000426447 WDR17Q8IZU2 1322 aa21.17■□□□□ 0.98
PDAP1-202ENST00000426447 USP6P35125 1406 aa21.16■□□□□ 0.98
PDAP1-202ENST00000426447 EXOC5O00471 708 aa21.15■□□□□ 0.98
PDAP1-202ENST00000426447 SOX12O15370 315 aa21.15■□□□□ 0.98
PDAP1-202ENST00000426447 TXNRD1Q16881 649 aa21.14■□□□□ 0.97
PDAP1-202ENST00000426447 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
PDAP1-202ENST00000426447 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
PDAP1-202ENST00000426447 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
PDAP1-202ENST00000426447 ARHGEF25Q86VW2 580 aa21.12■□□□□ 0.97
PDAP1-202ENST00000426447 ZNF692Q9BU19 519 aaPredicted RBP21.12■□□□□ 0.97
PDAP1-202ENST00000426447 CARD10Q9BWT7 1032 aa21.12■□□□□ 0.97
PDAP1-202ENST00000426447 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
PDAP1-202ENST00000426447 PTGER2P43116 358 aa21.11■□□□□ 0.97
PDAP1-202ENST00000426447 SLC15A2Q16348 729 aa21.11■□□□□ 0.97
PDAP1-202ENST00000426447 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
PDAP1-202ENST00000426447 SLIT3O75094 1523 aa21.1■□□□□ 0.97
PDAP1-202ENST00000426447 TTC21BQ7Z4L5 1316 aa21.08■□□□□ 0.97
PDAP1-202ENST00000426447 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.97
PDAP1-202ENST00000426447 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.97
PDAP1-202ENST00000426447 BCL9O00512 1426 aa21.08■□□□□ 0.97
PDAP1-202ENST00000426447 CPSF1Q10570 1443 aaKnown RBP21.08■□□□□ 0.97
PDAP1-202ENST00000426447 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
PDAP1-202ENST00000426447 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
PDAP1-202ENST00000426447 SBF2Q86WG5 1849 aa21.07■□□□□ 0.96
PDAP1-202ENST00000426447 ZNF784Q8NCA9 323 aaPredicted RBP21.07■□□□□ 0.96
PDAP1-202ENST00000426447 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
PDAP1-202ENST00000426447 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
PDAP1-202ENST00000426447 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
PDAP1-202ENST00000426447 ACSBG1Q96GR2 724 aa21.04■□□□□ 0.96
PDAP1-202ENST00000426447 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
PDAP1-202ENST00000426447 COL18A1P39060 1754 aa21.03■□□□□ 0.96
PDAP1-202ENST00000426447 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
PDAP1-202ENST00000426447 PIK3C2AO00443 1686 aa21.02■□□□□ 0.95
PDAP1-202ENST00000426447 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
PDAP1-202ENST00000426447 ARXQ96QS3 562 aa21.01■□□□□ 0.95
PDAP1-202ENST00000426447 NLRP2Q9NX02 1062 aa21.01■□□□□ 0.95
PDAP1-202ENST00000426447 MYOM1P52179 1685 aa21■□□□□ 0.95
PDAP1-202ENST00000426447 AKAP12Q02952 1782 aa21■□□□□ 0.95
PDAP1-202ENST00000426447 KTN1Q86UP2 1357 aaKnown RBP20.99■□□□□ 0.95
PDAP1-202ENST00000426447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.98■□□□□ 0.955e-6■■□□□ 11.8
PDAP1-202ENST00000426447 SGIP1Q9BQI5 828 aa20.98■□□□□ 0.95
PDAP1-202ENST00000426447 IL2RBP14784 551 aa20.97■□□□□ 0.95
PDAP1-202ENST00000426447 TNS2Q63HR2 1409 aa20.96■□□□□ 0.95
PDAP1-202ENST00000426447 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
PDAP1-202ENST00000426447 GPR162Q16538 588 aa20.96■□□□□ 0.95
PDAP1-202ENST00000426447 WNK3Q9BYP7 1800 aa20.96■□□□□ 0.95
PDAP1-202ENST00000426447 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
PDAP1-202ENST00000426447 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
PDAP1-202ENST00000426447 KLHL34Q8N239 644 aa20.94■□□□□ 0.94
PDAP1-202ENST00000426447 TRPM1Q7Z4N2 1603 aa20.93■□□□□ 0.94
PDAP1-202ENST00000426447 C1QTNF8P60827 252 aa20.93■□□□□ 0.94
PDAP1-202ENST00000426447 ANKRD24Q8TF21 1146 aa20.92■□□□□ 0.94
PDAP1-202ENST00000426447 ERBB3P21860 1342 aa20.92■□□□□ 0.94
PDAP1-202ENST00000426447 NFAT5O94916 1531 aa20.91■□□□□ 0.94
PDAP1-202ENST00000426447 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
PDAP1-202ENST00000426447 ZNF827Q17R98 1081 aa20.91■□□□□ 0.94
PDAP1-202ENST00000426447 NME9Q86XW9 330 aa20.91■□□□□ 0.94
PDAP1-202ENST00000426447 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
PDAP1-202ENST00000426447 POLD1P28340 1107 aa20.9■□□□□ 0.94
PDAP1-202ENST00000426447 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
PDAP1-202ENST00000426447 LRRC4BQ9NT99 713 aa20.9■□□□□ 0.94
PDAP1-202ENST00000426447 DDX54Q8TDD1 881 aaKnown RBP20.89■□□□□ 0.93
PDAP1-202ENST00000426447 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
PDAP1-202ENST00000426447 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
PDAP1-202ENST00000426447 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
PDAP1-202ENST00000426447 SLC16A10Q8TF71 515 aa20.88■□□□□ 0.93
PDAP1-202ENST00000426447 NHSQ6T4R5 1651 aa20.88■□□□□ 0.93
PDAP1-202ENST00000426447 ABCC6O95255 1503 aa20.88■□□□□ 0.93
PDAP1-202ENST00000426447 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
PDAP1-202ENST00000426447 TFCP2L1Q9NZI6 479 aa20.87■□□□□ 0.93
PDAP1-202ENST00000426447 SLC27A3Q5K4L6 730 aa20.86■□□□□ 0.93
PDAP1-202ENST00000426447 UTRNP46939 3433 aa20.85■□□□□ 0.93
PDAP1-202ENST00000426447 AKT1S1Q96B36 256 aa20.85■□□□□ 0.93
PDAP1-202ENST00000426447 SYTL4Q96C24 671 aaPredicted RBP20.85■□□□□ 0.93
PDAP1-202ENST00000426447 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
PDAP1-202ENST00000426447 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.93
PDAP1-202ENST00000426447 SLC12A5Q9H2X9 1139 aa20.83■□□□□ 0.93
PDAP1-202ENST00000426447 TERF2IPQ9NYB0 399 aa20.82■□□□□ 0.92
PDAP1-202ENST00000426447 CHD4Q14839 1912 aa20.81■□□□□ 0.92
PDAP1-202ENST00000426447 PRIM1P49642 420 aaKnown RBP20.81■□□□□ 0.92
PDAP1-202ENST00000426447 KCNQ4P56696 695 aa20.81■□□□□ 0.92
PDAP1-202ENST00000426447 PAPPAQ13219 1627 aa20.81■□□□□ 0.92
PDAP1-202ENST00000426447 SBNO2Q9Y2G9 1366 aa20.81■□□□□ 0.92
PDAP1-202ENST00000426447 PNPLA7Q6ZV29 1317 aa20.8■□□□□ 0.92
PDAP1-202ENST00000426447 MSH5O43196 834 aa20.8■□□□□ 0.92
PDAP1-202ENST00000426447 IP6K1Q92551 441 aa20.8■□□□□ 0.92
PDAP1-202ENST00000426447 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
PDAP1-202ENST00000426447 BTAF1O14981 1849 aa20.8■□□□□ 0.92
PDAP1-202ENST00000426447 KAT6BQ8WYB5 2073 aa20.79■□□□□ 0.92
PDAP1-202ENST00000426447 NLGN2Q8NFZ4 835 aa20.77■□□□□ 0.92
PDAP1-202ENST00000426447 MON2Q7Z3U7 1717 aa20.77■□□□□ 0.92
PDAP1-202ENST00000426447 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
PDAP1-202ENST00000426447 CD163L1Q9NR16 1453 aa20.76■□□□□ 0.91
PDAP1-202ENST00000426447 LTN1O94822 1766 aa20.75■□□□□ 0.91
PDAP1-202ENST00000426447 GRIN3BO60391 1043 aa20.75■□□□□ 0.91
PDAP1-202ENST00000426447 AMPHP49418 695 aa20.75■□□□□ 0.91
PDAP1-202ENST00000426447 ZCRB1Q8TBF4 217 aaKnown RBP20.75■□□□□ 0.91
PDAP1-202ENST00000426447 CCNL1Q9UK58 526 aaPredicted RBP20.75■□□□□ 0.91
PDAP1-202ENST00000426447 ANKRD36BQ8N2N9 1353 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms