RNA–Protein interactions for RNA: ENST00000426304.5

NHEJ1-204, Transcript of non-homologous end joining factor 1, human

TSL 3

Gene NHEJ1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NHEJ1-204	ENST00000426304	R3HDM1	Q15032	1099 aa	Known RBP	11.54	□□□□□ -0.56
NHEJ1-204	ENST00000426304	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.54	□□□□□ -0.56
NHEJ1-204	ENST00000426304	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
NHEJ1-204	ENST00000426304	KIAA0232	Q92628	1395 aa		11.54	□□□□□ -0.56
NHEJ1-204	ENST00000426304	C11orf95	C9JLR9	678 aa	Predicted RBP	11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	PAK3	O75914	559 aa	Predicted RBP	11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	BARGIN	Q6ZT62	677 aa		11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	CAMKK2	Q96RR4	588 aa		11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	NRK	Q7Z2Y5	1582 aa		11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	POLR3A	O14802	1390 aa	Predicted RBP	11.53	□□□□□ -0.56
NHEJ1-204	ENST00000426304	SSH2	Q76I76	1423 aa		11.52	□□□□□ -0.56
NHEJ1-204	ENST00000426304	NUP188	Q5SRE5	1749 aa		11.52	□□□□□ -0.56
NHEJ1-204	ENST00000426304	EZH2	Q15910	746 aa	Known RBP	11.52	□□□□□ -0.57
NHEJ1-204	ENST00000426304	LMO7	Q8WWI1	1683 aa		11.52	□□□□□ -0.57
NHEJ1-204	ENST00000426304	CPD	O75976	1380 aa		11.52	□□□□□ -0.57
NHEJ1-204	ENST00000426304	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.51	□□□□□ -0.57
NHEJ1-204	ENST00000426304	RGPD4	Q7Z3J3	1758 aa		11.51	□□□□□ -0.57
NHEJ1-204	ENST00000426304	PARP4	Q9UKK3	1724 aa	Known RBP	11.51	□□□□□ -0.57
NHEJ1-204	ENST00000426304	KIAA1210	Q9ULL0	1709 aa		11.51	□□□□□ -0.57
NHEJ1-204	ENST00000426304	TRIM37	O94972	964 aa		11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	NBPF8	Q3BBV2	869 aa		11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	FAM182B	Q5T319	152 aa		11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	NBPF14	Q5TI25	921 aa		11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	NUDT16	Q96DE0	195 aa	Known RBP	11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	RYDEN	Q9NUL5	291 aa	Known RBP	11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	THRAP3	Q9Y2W1	955 aa	Known RBP	11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	BRD4	O60885	1362 aa	Predicted RBP	11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	RAB3GAP2	Q9H2M9	1393 aa		11.5	□□□□□ -0.57
NHEJ1-204	ENST00000426304	APBA3	O96018	575 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	PDE3B	Q13370	1112 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	DCAF11	Q8TEB1	546 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	FAM212A	Q96EL1	285 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	ARX	Q96QS3	562 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	SGIP1	Q9BQI5	828 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	STRN4	Q9NRL3	753 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	USP19	O94966	1318 aa		11.49	□□□□□ -0.57
NHEJ1-204	ENST00000426304	PLEKHG3	A1L390	1219 aa		11.48	□□□□□ -0.57
NHEJ1-204	ENST00000426304	CHRM1	P11229	460 aa	Predicted RBP	11.48	□□□□□ -0.57
NHEJ1-204	ENST00000426304	TCP11L2	Q8N4U5	519 aa		11.48	□□□□□ -0.57
NHEJ1-204	ENST00000426304	CCDC61	Q9Y6R9	512 aa		11.48	□□□□□ -0.57
NHEJ1-204	ENST00000426304	CAMTA1	Q9Y6Y1	1673 aa		11.47	□□□□□ -0.57
NHEJ1-204	ENST00000426304	NINL	Q9Y2I6	1382 aa		11.47	□□□□□ -0.57
NHEJ1-204	ENST00000426304	EVA1C	P58658	441 aa		11.47	□□□□□ -0.57
NHEJ1-204	ENST00000426304	CHRNA2	Q15822	529 aa		11.47	□□□□□ -0.57
NHEJ1-204	ENST00000426304	ACE	P12821	1306 aa		11.46	□□□□□ -0.57
NHEJ1-204	ENST00000426304	ZC3H6	P61129	1189 aa	Known RBP	11.46	□□□□□ -0.57
NHEJ1-204	ENST00000426304	STK24	Q9Y6E0	443 aa		11.46	□□□□□ -0.57
NHEJ1-204	ENST00000426304	COL5A2	P05997	1499 aa	Predicted RBP	11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	OVOS2	A0A0G2JMS6	1433 aa		11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	OVOS2	A0A0J9YW53	1432 aa		11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	OVOS2	Q6IE36	1432 aa		11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	CDK19	Q9BWU1	502 aa		11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	PEAK1	Q9H792	1746 aa		11.45	□□□□□ -0.58
NHEJ1-204	ENST00000426304	CRB1	P82279	1406 aa		11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	LARP1	Q6PKG0	1096 aa	Known RBP	11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	NLRP13	Q86W25	1043 aa		11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	ABTB2	Q8N961	1025 aa		11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	SPON1	Q9HCB6	807 aa		11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	USP35	Q9P2H5	1018 aa		11.44	□□□□□ -0.58
NHEJ1-204	ENST00000426304	LRRC37A3	O60309	1634 aa		11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	YY1	P25490	414 aa		11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	ZFP91	Q96JP5	570 aa	Predicted RBP	11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	WNK3	Q9BYP7	1800 aa		11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	SLIT3	O75094	1523 aa		11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	BCL9	O00512	1426 aa		11.43	□□□□□ -0.58
NHEJ1-204	ENST00000426304	SBF2	Q86WG5	1849 aa		11.42	□□□□□ -0.58
NHEJ1-204	ENST00000426304	PLSCR1	O15162	318 aa		11.42	□□□□□ -0.58
NHEJ1-204	ENST00000426304	KCNQ2	O43526	872 aa		11.42	□□□□□ -0.58
NHEJ1-204	ENST00000426304	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.42	□□□□□ -0.58
NHEJ1-204	ENST00000426304	PPIP5K1	Q6PFW1	1433 aa		11.42	□□□□□ -0.58
NHEJ1-204	ENST00000426304	AATK	Q6ZMQ8	1374 aa		11.41	□□□□□ -0.58
NHEJ1-204	ENST00000426304	CASZ1	Q86V15	1759 aa		11.41	□□□□□ -0.58
NHEJ1-204	ENST00000426304	GC	P02774	474 aa		11.41	□□□□□ -0.58
NHEJ1-204	ENST00000426304	NUTM2G	Q5VZR2	741 aa		11.41	□□□□□ -0.58
NHEJ1-204	ENST00000426304	QRICH2	Q9H0J4	1663 aa		11.4	□□□□□ -0.58
NHEJ1-204	ENST00000426304	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.4	□□□□□ -0.58
NHEJ1-204	ENST00000426304	AKAP12	Q02952	1782 aa		11.4	□□□□□ -0.58
NHEJ1-204	ENST00000426304	USP6	P35125	1406 aa		11.4	□□□□□ -0.58
NHEJ1-204	ENST00000426304	ABCC6	O95255	1503 aa		11.39	□□□□□ -0.59
NHEJ1-204	ENST00000426304	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	MNX1	P50219	401 aa	Predicted RBP	11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	SRPK2	P78362	688 aa	Known RBP	11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	DDB1	Q16531	1140 aa		11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	CREBZF	Q9NS37	354 aa		11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	COL18A1	P39060	1754 aa		11.38	□□□□□ -0.59
NHEJ1-204	ENST00000426304	PIK3C2A	O00443	1686 aa		11.37	□□□□□ -0.59
NHEJ1-204	ENST00000426304	RASEF	Q8IZ41	740 aa		11.37	□□□□□ -0.59
NHEJ1-204	ENST00000426304	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.37	□□□□□ -0.59
NHEJ1-204	ENST00000426304	WDR17	Q8IZU2	1322 aa		11.36	□□□□□ -0.59
NHEJ1-204	ENST00000426304	CPSF1	Q10570	1443 aa	Known RBP	11.36	□□□□□ -0.59
NHEJ1-204	ENST00000426304	TRPM1	Q7Z4N2	1603 aa		11.35	□□□□□ -0.59
NHEJ1-204	ENST00000426304	NLRP6	P59044	892 aa		11.35	□□□□□ -0.59
NHEJ1-204	ENST00000426304	TOM1L2	Q6ZVM7	507 aa		11.35	□□□□□ -0.59
NHEJ1-204	ENST00000426304	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
NHEJ1-204	ENST00000426304	KCNH5	Q8NCM2	988 aa		11.34	□□□□□ -0.59
NHEJ1-204	ENST00000426304	KCNV2	Q8TDN2	545 aa		11.34	□□□□□ -0.59
NHEJ1-204	ENST00000426304	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.34	□□□□□ -0.59
NHEJ1-204	ENST00000426304	MYOM1	P52179	1685 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms