RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 RRS1Q15050 365 aaKnown RBP32.57■■■□□ 2.8
APOE-202ENST00000425718 FNBP4Q8N3X1 1017 aaPredicted RBP32.57■■■□□ 2.8
APOE-202ENST00000425718 POLKQ9UBT6 870 aa32.56■■■□□ 2.8
APOE-202ENST00000425718 CHRNA2Q15822 529 aa32.55■■■□□ 2.8
APOE-202ENST00000425718 FAM208AQ9UK61 1670 aaKnown RBP32.55■■■□□ 2.8
APOE-202ENST00000425718 NRAPQ86VF7 1730 aa32.54■■■□□ 2.8
APOE-202ENST00000425718 CDK12Q9NYV4 1490 aaPredicted RBP32.54■■■□□ 2.8
APOE-202ENST00000425718 HOXC9P31274 260 aa32.53■■■□□ 2.8
APOE-202ENST00000425718 PRKRIP1Q9H875 184 aaPredicted RBP32.53■■■□□ 2.8
APOE-202ENST00000425718 BTG4Q9NY30 223 aa32.53■■■□□ 2.8
APOE-202ENST00000425718 ZNF772Q68DY9 489 aaPredicted RBP32.52■■■□□ 2.8
APOE-202ENST00000425718 AFF2P51816 1311 aa32.51■■■□□ 2.8
APOE-202ENST00000425718 PEAK1Q9H792 1746 aa32.51■■■□□ 2.8
APOE-202ENST00000425718 CAMTA1Q9Y6Y1 1673 aa32.51■■■□□ 2.79
APOE-202ENST00000425718 INSRP06213 1382 aa32.51■■■□□ 2.79
APOE-202ENST00000425718 PHF23Q9BUL5 403 aaPredicted RBP32.51■■■□□ 2.79
APOE-202ENST00000425718 EMILIN1Q9Y6C2 1016 aa32.51■■■□□ 2.79
APOE-202ENST00000425718 PPM1GO15355 546 aaPredicted RBP32.5■■■□□ 2.79
APOE-202ENST00000425718 FBLN1P23142 703 aa32.5■■■□□ 2.79
APOE-202ENST00000425718 EVA1CP58658 441 aa32.5■■■□□ 2.79
APOE-202ENST00000425718 UNC5CLQ8IV45 518 aa32.5■■■□□ 2.79
APOE-202ENST00000425718 USP21Q9UK80 565 aa32.5■■■□□ 2.79
APOE-202ENST00000425718 MYBBP1AQ9BQG0 1328 aaKnown RBP32.5■■■□□ 2.79
APOE-202ENST00000425718 PPP2R1AP30153 589 aa32.49■■■□□ 2.79
APOE-202ENST00000425718 COL5A2P05997 1499 aaPredicted RBP32.48■■■□□ 2.79
APOE-202ENST00000425718 CFAP53Q96M91 514 aa32.48■■■□□ 2.79
APOE-202ENST00000425718 MTHFSP49914 203 aa32.47■■■□□ 2.79
APOE-202ENST00000425718 BCL9LQ86UU0 1499 aa32.45■■■□□ 2.79
APOE-202ENST00000425718 TRPC5Q9UL62 973 aaPredicted RBP32.44■■■□□ 2.78
APOE-202ENST00000425718 AXIN2Q9Y2T1 843 aa32.44■■■□□ 2.78
APOE-202ENST00000425718 ERBB3P21860 1342 aa32.44■■■□□ 2.78
APOE-202ENST00000425718 DIEXFQ68CQ4 756 aaKnown RBP32.43■■■□□ 2.78
APOE-202ENST00000425718 WDR17Q8IZU2 1322 aa32.43■■■□□ 2.78
APOE-202ENST00000425718 CSB-PGBD3P0DP91 1061 aa32.42■■■□□ 2.78
APOE-202ENST00000425718 ANKRD24Q8TF21 1146 aa32.42■■■□□ 2.78
APOE-202ENST00000425718 STRN4Q9NRL3 753 aa32.41■■■□□ 2.78
APOE-202ENST00000425718 VPS72Q15906 364 aa32.4■■■□□ 2.78
APOE-202ENST00000425718 HSP90AB2PQ58FF8 381 aa32.4■■■□□ 2.78
APOE-202ENST00000425718 CRB1P82279 1406 aa32.39■■■□□ 2.78
APOE-202ENST00000425718 ATRNO75882 1429 aa32.38■■■□□ 2.77
APOE-202ENST00000425718 TOM1L2Q6ZVM7 507 aa32.36■■■□□ 2.77
APOE-202ENST00000425718 DIAPH1O60610 1272 aaKnown RBP32.34■■■□□ 2.77
APOE-202ENST00000425718 LTV1Q96GA3 475 aaPredicted RBP32.34■■■□□ 2.77
APOE-202ENST00000425718 QTRT2Q9H974 415 aaKnown RBP32.34■■■□□ 2.77
APOE-202ENST00000425718 THRAP3Q9Y2W1 955 aaKnown RBP32.34■■■□□ 2.77
APOE-202ENST00000425718 CCDC9Q9Y3X0 531 aaKnown RBP32.34■■■□□ 2.77
APOE-202ENST00000425718 CARD10Q9BWT7 1032 aa32.33■■■□□ 2.77
APOE-202ENST00000425718 NUDCQ9Y266 331 aa32.33■■■□□ 2.77
APOE-202ENST00000425718 LARP1Q6PKG0 1096 aaKnown RBP32.32■■■□□ 2.76
APOE-202ENST00000425718 RGPD2P0DJD1 1756 aa32.32■■■□□ 2.76
APOE-202ENST00000425718 SPATA31A5Q5VU36 1347 aa32.31■■■□□ 2.76
APOE-202ENST00000425718 SPATA31A7Q8IWB4 1347 aa32.31■■■□□ 2.76
APOE-202ENST00000425718 EIF4A2Q14240 407 aaKnown RBP32.31■■■□□ 2.76
APOE-202ENST00000425718 NLRP2Q9NX02 1062 aa32.31■■■□□ 2.76
APOE-202ENST00000425718 COL3A1P02461 1466 aaPredicted RBP32.3■■■□□ 2.76
APOE-202ENST00000425718 SPATA31A1Q5TZJ5 1347 aa32.29■■■□□ 2.76
APOE-202ENST00000425718 GJD4Q96KN9 370 aaPredicted RBP32.29■■■□□ 2.76
APOE-202ENST00000425718 TCP11L2Q8N4U5 519 aa32.28■■■□□ 2.76
APOE-202ENST00000425718 IL13P35225 146 aa32.27■■■□□ 2.76
APOE-202ENST00000425718 RBM6P78332 1123 aaKnown RBP32.27■■■□□ 2.76
APOE-202ENST00000425718 CDCA7Q9BWT1 371 aaPredicted RBP32.27■■■□□ 2.76
APOE-202ENST00000425718 WNK3Q9BYP7 1800 aa32.26■■■□□ 2.76
APOE-202ENST00000425718 RGPD1P0DJD0 1748 aa32.25■■■□□ 2.75
APOE-202ENST00000425718 BARGINQ6ZT62 677 aa32.24■■■□□ 2.75
APOE-202ENST00000425718 RGS17Q9UGC6 210 aaPredicted RBP32.24■■■□□ 2.75
APOE-202ENST00000425718 GLI3P10071 1580 aa32.23■■■□□ 2.75
APOE-202ENST00000425718 IGSF1Q8N6C5 1336 aa32.23■■■□□ 2.75
APOE-202ENST00000425718 PLEKHG2Q9H7P9 1386 aa32.22■■■□□ 2.75
APOE-202ENST00000425718 RXRBP28702 533 aa32.22■■■□□ 2.75
APOE-202ENST00000425718 NCAPD2Q15021 1401 aa32.22■■■□□ 2.75
APOE-202ENST00000425718 NBPF6Q5VWK0 638 aa32.21■■■□□ 2.75
APOE-202ENST00000425718 NBPF4Q96M43 638 aa32.21■■■□□ 2.75
APOE-202ENST00000425718 EYA1Q99502 592 aa32.21■■■□□ 2.75
APOE-202ENST00000425718 PARP4Q9UKK3 1724 aaKnown RBP32.2■■■□□ 2.75
APOE-202ENST00000425718 USP35Q9P2H5 1018 aa32.2■■■□□ 2.75
APOE-202ENST00000425718 U2SURPO15042 1029 aaKnown RBP32.17■■■□□ 2.74
APOE-202ENST00000425718 RAPGEF4Q8WZA2 1011 aa32.17■■■□□ 2.74
APOE-202ENST00000425718 CCER2I3L3R5 266 aa32.15■■■□□ 2.74
APOE-202ENST00000425718 IL2RBP14784 551 aa32.15■■■□□ 2.74
APOE-202ENST00000425718 POTEAQ6S8J7 498 aa32.15■■■□□ 2.74
APOE-202ENST00000425718 PNNQ9H307 717 aaKnown RBP32.15■■■□□ 2.74
APOE-202ENST00000425718 KDRP35968 1356 aa32.15■■■□□ 2.74
APOE-202ENST00000425718 ONECUT3O60422 494 aaPredicted RBP32.14■■■□□ 2.74
APOE-202ENST00000425718 WDR43Q15061 677 aaKnown RBP eCLIP32.14■■■□□ 2.74
APOE-202ENST00000425718 MRS2Q9HD23 443 aa32.14■■■□□ 2.74
APOE-202ENST00000425718 THSD7AQ9UPZ6 1657 aa32.13■■■□□ 2.73
APOE-202ENST00000425718 TATP17735 454 aaPredicted RBP32.12■■■□□ 2.73
APOE-202ENST00000425718 FAM98CQ17RN3 349 aaKnown RBP32.12■■■□□ 2.73
APOE-202ENST00000425718 DISP2A7MBM2 1401 aa32.11■■■□□ 2.73
APOE-202ENST00000425718 U2AF1L5P0DN76 240 aaPredicted RBP32.11■■■□□ 2.73
APOE-202ENST00000425718 U2AF1Q01081 240 aaKnown RBP eCLIP32.11■■■□□ 2.73
APOE-202ENST00000425718 SULT6B1Q6IMI4 303 aa32.11■■■□□ 2.73
APOE-202ENST00000425718 USHBP1Q8N6Y0 703 aa32.1■■■□□ 2.73
APOE-202ENST00000425718 FCHSD2O94868 740 aa32.09■■■□□ 2.73
APOE-202ENST00000425718 A0A0G2JS52 829 aa32.08■■■□□ 2.73
APOE-202ENST00000425718 NEFMP07197 916 aa32.08■■■□□ 2.73
APOE-202ENST00000425718 MYT1Q01538 1121 aa32.08■■■□□ 2.73
APOE-202ENST00000425718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.06■■■□□ 2.72
APOE-202ENST00000425718 OVOS2A0A0G2JMS6 1433 aa32.06■■■□□ 2.72
APOE-202ENST00000425718 EXOC5O00471 708 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms