RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 DDB1Q16531 1140 aa21.82■■□□□ 1.08
HDAC11-210ENST00000425430 AKAP12Q02952 1782 aa21.82■■□□□ 1.08
HDAC11-210ENST00000425430 KCNQ2O43526 872 aa21.81■■□□□ 1.08
HDAC11-210ENST00000425430 COL18A1P39060 1754 aa21.81■■□□□ 1.08
HDAC11-210ENST00000425430 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
HDAC11-210ENST00000425430 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
HDAC11-210ENST00000425430 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
HDAC11-210ENST00000425430 SOX12O15370 315 aa21.78■■□□□ 1.08
HDAC11-210ENST00000425430 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
HDAC11-210ENST00000425430 WDR17Q8IZU2 1322 aa21.78■■□□□ 1.08
HDAC11-210ENST00000425430 CASZ1Q86V15 1759 aa21.77■■□□□ 1.08
HDAC11-210ENST00000425430 RGPD5Q99666 1765 aa21.77■■□□□ 1.08
HDAC11-210ENST00000425430 EVC2Q86UK5 1308 aa21.77■■□□□ 1.07
HDAC11-210ENST00000425430 TONSLQ96HA7 1378 aa21.76■■□□□ 1.07
HDAC11-210ENST00000425430 DCAF8L1A6NGE4 600 aa21.76■■□□□ 1.07
HDAC11-210ENST00000425430 PTF1AQ7RTS3 328 aa21.76■■□□□ 1.07
HDAC11-210ENST00000425430 ROCK2O75116 1388 aaKnown RBP21.75■■□□□ 1.07
HDAC11-210ENST00000425430 PLSCR1O15162 318 aa21.75■■□□□ 1.07
HDAC11-210ENST00000425430 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
HDAC11-210ENST00000425430 BCL11BQ9C0K0 894 aaPredicted RBP21.75■■□□□ 1.07
HDAC11-210ENST00000425430 AXIN2Q9Y2T1 843 aa21.75■■□□□ 1.07
HDAC11-210ENST00000425430 MARCH10Q8NA82 808 aaPredicted RBP21.73■■□□□ 1.07
HDAC11-210ENST00000425430 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-210ENST00000425430 TTC21BQ7Z4L5 1316 aa21.72■■□□□ 1.07
HDAC11-210ENST00000425430 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
HDAC11-210ENST00000425430 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
HDAC11-210ENST00000425430 MYOM1P52179 1685 aa21.71■■□□□ 1.07
HDAC11-210ENST00000425430 PDGFDQ9GZP0 370 aaPredicted RBP21.7■■□□□ 1.06
HDAC11-210ENST00000425430 NFAT5O94916 1531 aa21.7■■□□□ 1.06
HDAC11-210ENST00000425430 ZBTB7AO95365 584 aa21.69■■□□□ 1.06
HDAC11-210ENST00000425430 CARD10Q9BWT7 1032 aa21.69■■□□□ 1.06
HDAC11-210ENST00000425430 BCL9O00512 1426 aa21.69■■□□□ 1.06
HDAC11-210ENST00000425430 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
HDAC11-210ENST00000425430 TTC21AQ8NDW8 1320 aa21.68■■□□□ 1.06
HDAC11-210ENST00000425430 TNS2Q63HR2 1409 aa21.67■■□□□ 1.06
HDAC11-210ENST00000425430 PROM2Q8N271 834 aa21.67■■□□□ 1.06
HDAC11-210ENST00000425430 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
HDAC11-210ENST00000425430 KTN1Q86UP2 1357 aaKnown RBP21.66■■□□□ 1.06
HDAC11-210ENST00000425430 STK32BQ9NY57 414 aa21.66■■□□□ 1.06
HDAC11-210ENST00000425430 ABCC6O95255 1503 aa21.65■■□□□ 1.06
HDAC11-210ENST00000425430 CCDC7Q96M83 1385 aa21.65■■□□□ 1.06
HDAC11-210ENST00000425430 EXOC5O00471 708 aa21.65■■□□□ 1.06
HDAC11-210ENST00000425430 TXNRD1Q16881 649 aa21.65■■□□□ 1.06
HDAC11-210ENST00000425430 NHSQ6T4R5 1651 aa21.65■■□□□ 1.06
HDAC11-210ENST00000425430 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.05
HDAC11-210ENST00000425430 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
HDAC11-210ENST00000425430 PTGER2P43116 358 aa21.61■■□□□ 1.05
HDAC11-210ENST00000425430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
HDAC11-210ENST00000425430 LTN1O94822 1766 aa21.61■■□□□ 1.05
HDAC11-210ENST00000425430 SLC15A2Q16348 729 aa21.6■■□□□ 1.05
HDAC11-210ENST00000425430 ACSBG1Q96GR2 724 aa21.6■■□□□ 1.05
HDAC11-210ENST00000425430 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
HDAC11-210ENST00000425430 NLRP2Q9NX02 1062 aa21.58■■□□□ 1.05
HDAC11-210ENST00000425430 ERBB3P21860 1342 aa21.57■■□□□ 1.04
HDAC11-210ENST00000425430 BTAF1O14981 1849 aa21.57■■□□□ 1.04
HDAC11-210ENST00000425430 FHDC1Q9C0D6 1143 aaPredicted RBP21.56■■□□□ 1.04
HDAC11-210ENST00000425430 MTFR1LQ9H019 292 aa21.56■■□□□ 1.04
HDAC11-210ENST00000425430 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
HDAC11-210ENST00000425430 NME9Q86XW9 330 aa21.55■■□□□ 1.04
HDAC11-210ENST00000425430 USP31Q70CQ4 1352 aa21.55■■□□□ 1.04
HDAC11-210ENST00000425430 SBNO2Q9Y2G9 1366 aa21.54■■□□□ 1.04
HDAC11-210ENST00000425430 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
HDAC11-210ENST00000425430 KAT6BQ8WYB5 2073 aa21.53■■□□□ 1.04
HDAC11-210ENST00000425430 IL2RBP14784 551 aa21.53■■□□□ 1.04
HDAC11-210ENST00000425430 TMC1Q8TDI8 760 aa21.53■■□□□ 1.04
HDAC11-210ENST00000425430 SYT17Q9BSW7 474 aa21.53■■□□□ 1.04
HDAC11-210ENST00000425430 UTRNP46939 3433 aa21.53■■□□□ 1.04
HDAC11-210ENST00000425430 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.04
HDAC11-210ENST00000425430 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
HDAC11-210ENST00000425430 HDGFL2Q7Z4V5 671 aaPredicted RBP21.5■■□□□ 1.03
HDAC11-210ENST00000425430 ZNF784Q8NCA9 323 aaPredicted RBP21.5■■□□□ 1.03
HDAC11-210ENST00000425430 TESK2Q96S53 571 aa21.49■■□□□ 1.03
HDAC11-210ENST00000425430 SGIP1Q9BQI5 828 aa21.49■■□□□ 1.03
HDAC11-210ENST00000425430 EDC4Q6P2E9 1401 aaKnown RBP21.48■■□□□ 1.03
HDAC11-210ENST00000425430 ST20-MTHFSA0A0A6YYL1 179 aa21.48■■□□□ 1.03
HDAC11-210ENST00000425430 ZNF827Q17R98 1081 aa21.48■■□□□ 1.03
HDAC11-210ENST00000425430 CCER1Q8TC90 406 aaPredicted RBP21.48■■□□□ 1.03
HDAC11-210ENST00000425430 ARXQ96QS3 562 aa21.48■■□□□ 1.03
HDAC11-210ENST00000425430 CHD4Q14839 1912 aa21.48■■□□□ 1.03
HDAC11-210ENST00000425430 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
HDAC11-210ENST00000425430 SLC12A5Q9H2X9 1139 aa21.46■■□□□ 1.03
HDAC11-210ENST00000425430 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
HDAC11-210ENST00000425430 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
HDAC11-210ENST00000425430 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
HDAC11-210ENST00000425430 LRRC4BQ9NT99 713 aa21.44■■□□□ 1.02
HDAC11-210ENST00000425430 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
HDAC11-210ENST00000425430 USP47Q96K76 1375 aa21.44■■□□□ 1.02
HDAC11-210ENST00000425430 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
HDAC11-210ENST00000425430 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
HDAC11-210ENST00000425430 DOT1LQ8TEK3 1739 aa21.43■■□□□ 1.02
HDAC11-210ENST00000425430 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
HDAC11-210ENST00000425430 MAP3K5Q99683 1374 aa21.42■■□□□ 1.02
HDAC11-210ENST00000425430 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
HDAC11-210ENST00000425430 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
HDAC11-210ENST00000425430 GPR162Q16538 588 aa21.39■■□□□ 1.01
HDAC11-210ENST00000425430 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
HDAC11-210ENST00000425430 IP6K1Q92551 441 aa21.39■■□□□ 1.01
HDAC11-210ENST00000425430 AKT1S1Q96B36 256 aa21.39■■□□□ 1.01
HDAC11-210ENST00000425430 POLD1P28340 1107 aa21.37■■□□□ 1.01
HDAC11-210ENST00000425430 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms