RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DTNBO60941 627 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 TET3O43151 1660 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 KANK1Q14678 1352 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 U2SURPO15042 1029 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 NUCB1Q02818 461 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 CLTCL1P53675 1640 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 EIF2AK4Q9P2K8 1649 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 ATF7IPQ6VMQ6 1270 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 SLC12A5Q9H2X9 1139 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 KIF20AO95235 890 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 DDX19BQ9UMR2 479 aa13.88□□□□□ -0.19
SEC61A1-202ENST00000424880 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
SEC61A1-202ENST00000424880 GGT6Q6P531 493 aa13.87□□□□□ -0.19
SEC61A1-202ENST00000424880 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
SEC61A1-202ENST00000424880 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 C16orf71Q8IYS4 520 aaPredicted RBP13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 LAMC1P11047 1609 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
SEC61A1-202ENST00000424880 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 LRSAM1Q6UWE0 723 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 HECW2Q9P2P5 1572 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 ABCA6Q8N139 1617 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
SEC61A1-202ENST00000424880 ARHGAP31Q2M1Z3 1444 aa13.84□□□□□ -0.19
SEC61A1-202ENST00000424880 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
SEC61A1-202ENST00000424880 EFCAB6Q5THR3 1501 aa13.83□□□□□ -0.2
SEC61A1-202ENST00000424880 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.21e-8■□□□□ 8.2
SEC61A1-202ENST00000424880 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
SEC61A1-202ENST00000424880 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
SEC61A1-202ENST00000424880 CEP152O94986 1710 aa13.83□□□□□ -0.2
SEC61A1-202ENST00000424880 MCM5P33992 734 aa13.83□□□□□ -0.2
SEC61A1-202ENST00000424880 ZNF771Q7L3S4 317 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 GSPT1P15170 499 aaKnown RBP13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 IPO4Q8TEX9 1081 aaKnown RBP13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 YEATS2Q9ULM3 1422 aa13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
SEC61A1-202ENST00000424880 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 KIF3AQ9Y496 699 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 NPATQ14207 1427 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 GADD45BO75293 160 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 LMTK2Q8IWU2 1503 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 SMARCA5O60264 1052 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 NUCB2P80303 420 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 NAA30Q147X3 362 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 PDCL2Q8N4E4 241 aa13.81□□□□□ -0.2
SEC61A1-202ENST00000424880 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-202ENST00000424880 CLEC17AQ6ZS10 378 aa13.8□□□□□ -0.2
SEC61A1-202ENST00000424880 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
SEC61A1-202ENST00000424880 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 TRERF1Q96PN7 1200 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
SEC61A1-202ENST00000424880 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-202ENST00000424880 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEC61A1-202ENST00000424880 TSPY26PQ9H489 355 aa13.78□□□□□ -0.2
SEC61A1-202ENST00000424880 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
SEC61A1-202ENST00000424880 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.2
SEC61A1-202ENST00000424880 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.2
SEC61A1-202ENST00000424880 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 ADCY5O95622 1261 aa13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 CDC45O75419 566 aa13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 SYNMO15061 1565 aa13.77□□□□□ -0.21
SEC61A1-202ENST00000424880 NSD3Q9BZ95 1437 aa13.76□□□□□ -0.21
SEC61A1-202ENST00000424880 ABCC3O15438 1527 aa13.76□□□□□ -0.21
SEC61A1-202ENST00000424880 FBLN1P23142 703 aa13.76□□□□□ -0.21
SEC61A1-202ENST00000424880 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
SEC61A1-202ENST00000424880 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 RABEP1Q15276 862 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 TSHZ3Q63HK5 1081 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 USP26Q9BXU7 913 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 POLR3AO14802 1390 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 NEK4P51957 841 aa13.75□□□□□ -0.21
SEC61A1-202ENST00000424880 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms