RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PDE3BQ13370 1112 aa26.02■■□□□ 1.76
NUP50-207ENST00000424634 FAM196AQ6ZSG2 479 aa26.02■■□□□ 1.76
NUP50-207ENST00000424634 TERF2IPQ9NYB0 399 aa26.02■■□□□ 1.76
NUP50-207ENST00000424634 USP54Q70EL1 1684 aa26.01■■□□□ 1.75
NUP50-207ENST00000424634 EDC4Q6P2E9 1401 aaKnown RBP26■■□□□ 1.75
NUP50-207ENST00000424634 WDR17Q8IZU2 1322 aa26■■□□□ 1.75
NUP50-207ENST00000424634 EN1Q05925 392 aaPredicted RBP26■■□□□ 1.75
NUP50-207ENST00000424634 TOM1L2Q6ZVM7 507 aa26■■□□□ 1.75
NUP50-207ENST00000424634 TNS1Q9HBL0 1735 aaKnown RBP26■■□□□ 1.75
NUP50-207ENST00000424634 PARP4Q9UKK3 1724 aaKnown RBP26■■□□□ 1.75
NUP50-207ENST00000424634 USP47Q96K76 1375 aa25.99■■□□□ 1.75
NUP50-207ENST00000424634 TRIM37O94972 964 aa25.99■■□□□ 1.75
NUP50-207ENST00000424634 SLC24A1O60721 1099 aa25.98■■□□□ 1.75
NUP50-207ENST00000424634 CLSPNQ9HAW4 1339 aa25.97■■□□□ 1.75
NUP50-207ENST00000424634 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
NUP50-207ENST00000424634 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.74
NUP50-207ENST00000424634 DISP2A7MBM2 1401 aa25.94■■□□□ 1.74
NUP50-207ENST00000424634 CARD10Q9BWT7 1032 aa25.93■■□□□ 1.74
NUP50-207ENST00000424634 LTN1O94822 1766 aa25.92■■□□□ 1.74
NUP50-207ENST00000424634 CSB-PGBD3P0DP91 1061 aa25.92■■□□□ 1.74
NUP50-207ENST00000424634 TMF1P82094 1093 aa25.92■■□□□ 1.74
NUP50-207ENST00000424634 EZH2Q15910 746 aaKnown RBP25.92■■□□□ 1.74
NUP50-207ENST00000424634 WNK3Q9BYP7 1800 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 OVOS2A0A0J9YW53 1432 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 OVOS2Q6IE36 1432 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 CAMKK2Q96RR4 588 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 ABCC6O95255 1503 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 LRRC37A3O60309 1634 aa25.91■■□□□ 1.74
NUP50-207ENST00000424634 APBA3O96018 575 aa25.9■■□□□ 1.74
NUP50-207ENST00000424634 DDB1Q16531 1140 aa25.9■■□□□ 1.74
NUP50-207ENST00000424634 PEAK1Q9H792 1746 aa25.89■■□□□ 1.74
NUP50-207ENST00000424634 ANKRD36BQ8N2N9 1353 aa25.87■■□□□ 1.73
NUP50-207ENST00000424634 PSDA5PKW4 1024 aaPredicted RBP25.86■■□□□ 1.73
NUP50-207ENST00000424634 CDCA7Q9BWT1 371 aaPredicted RBP25.86■■□□□ 1.73
NUP50-207ENST00000424634 ERBB3P21860 1342 aa25.86■■□□□ 1.73
NUP50-207ENST00000424634 FBLN1P23142 703 aa25.85■■□□□ 1.73
NUP50-207ENST00000424634 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
NUP50-207ENST00000424634 SBF2Q86WG5 1849 aa25.85■■□□□ 1.73
NUP50-207ENST00000424634 OVOS2A0A0G2JMS6 1433 aa25.84■■□□□ 1.73
NUP50-207ENST00000424634 CCDC7Q96M83 1385 aa25.83■■□□□ 1.73
NUP50-207ENST00000424634 ANKRD24Q8TF21 1146 aa25.83■■□□□ 1.73
NUP50-207ENST00000424634 COG3Q96JB2 828 aa25.83■■□□□ 1.73
NUP50-207ENST00000424634 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
NUP50-207ENST00000424634 NLRP2Q9NX02 1062 aa25.82■■□□□ 1.72
NUP50-207ENST00000424634 FYB1O15117 783 aa25.81■■□□□ 1.72
NUP50-207ENST00000424634 PTF1AQ7RTS3 328 aa25.81■■□□□ 1.72
NUP50-207ENST00000424634 IP6K1Q92551 441 aa25.81■■□□□ 1.72
NUP50-207ENST00000424634 EXOC5O00471 708 aa25.8■■□□□ 1.72
NUP50-207ENST00000424634 CDCA8Q53HL2 280 aa25.8■■□□□ 1.72
NUP50-207ENST00000424634 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
NUP50-207ENST00000424634 R3HDM1Q15032 1099 aaKnown RBP25.79■■□□□ 1.72
NUP50-207ENST00000424634 PARD3Q8TEW0 1356 aa25.79■■□□□ 1.72
NUP50-207ENST00000424634 MAP3K19Q56UN5 1328 aa25.78■■□□□ 1.72
NUP50-207ENST00000424634 RREB1Q92766 1687 aa25.77■■□□□ 1.72
NUP50-207ENST00000424634 GGNBP2Q9H3C7 697 aa25.77■■□□□ 1.72
NUP50-207ENST00000424634 CARD14Q9BXL6 1004 aa25.76■■□□□ 1.71
NUP50-207ENST00000424634 BCL9O00512 1426 aa25.76■■□□□ 1.71
NUP50-207ENST00000424634 MYOM1P52179 1685 aa25.76■■□□□ 1.71
NUP50-207ENST00000424634 LTV1Q96GA3 475 aaPredicted RBP25.75■■□□□ 1.71
NUP50-207ENST00000424634 BCL11BQ9C0K0 894 aaPredicted RBP25.75■■□□□ 1.71
NUP50-207ENST00000424634 NUP188Q5SRE5 1749 aa25.74■■□□□ 1.71
NUP50-207ENST00000424634 HOXC9P31274 260 aa25.74■■□□□ 1.71
NUP50-207ENST00000424634 IL2RBP14784 551 aa25.73■■□□□ 1.71
NUP50-207ENST00000424634 TNS2Q63HR2 1409 aa25.72■■□□□ 1.71
NUP50-207ENST00000424634 AMPHP49418 695 aa25.72■■□□□ 1.71
NUP50-207ENST00000424634 RRS1Q15050 365 aaKnown RBP25.72■■□□□ 1.71
NUP50-207ENST00000424634 PLSCR1O15162 318 aa25.71■■□□□ 1.71
NUP50-207ENST00000424634 KIF20BQ96Q89 1820 aa25.7■■□□□ 1.7
NUP50-207ENST00000424634 RGPD2P0DJD1 1756 aa25.69■■□□□ 1.7
NUP50-207ENST00000424634 LRP5O75197 1615 aa25.69■■□□□ 1.7
NUP50-207ENST00000424634 KCNQ2O43526 872 aa25.68■■□□□ 1.7
NUP50-207ENST00000424634 PROM2Q8N271 834 aa25.68■■□□□ 1.7
NUP50-207ENST00000424634 FAM208AQ9UK61 1670 aaKnown RBP25.68■■□□□ 1.7
NUP50-207ENST00000424634 HSPA5P11021 654 aaKnown RBP25.67■■□□□ 1.7
NUP50-207ENST00000424634 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
NUP50-207ENST00000424634 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
NUP50-207ENST00000424634 NSD3Q9BZ95 1437 aa25.66■■□□□ 1.7
NUP50-207ENST00000424634 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
NUP50-207ENST00000424634 NBPF14Q5TI25 921 aa25.65■■□□□ 1.7
NUP50-207ENST00000424634 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
NUP50-207ENST00000424634 RTL1A6NKG5 1358 aa25.64■■□□□ 1.69
NUP50-207ENST00000424634 POLR3GLQ9BT43 218 aa25.63■■□□□ 1.69
NUP50-207ENST00000424634 KAT6BQ8WYB5 2073 aa25.63■■□□□ 1.69
NUP50-207ENST00000424634 NBPF6Q5VWK0 638 aa25.62■■□□□ 1.69
NUP50-207ENST00000424634 NBPF4Q96M43 638 aa25.62■■□□□ 1.69
NUP50-207ENST00000424634 HSP90AB2PQ58FF8 381 aa25.61■■□□□ 1.69
NUP50-207ENST00000424634 NHSQ6T4R5 1651 aa25.61■■□□□ 1.69
NUP50-207ENST00000424634 DDX54Q8TDD1 881 aaKnown RBP25.59■■□□□ 1.69
NUP50-207ENST00000424634 ANO8Q9HCE9 1232 aaPredicted RBP25.59■■□□□ 1.69
NUP50-207ENST00000424634 TXNRD1Q16881 649 aa25.57■■□□□ 1.68
NUP50-207ENST00000424634 USHBP1Q8N6Y0 703 aa25.57■■□□□ 1.68
NUP50-207ENST00000424634 EMILIN1Q9Y6C2 1016 aa25.57■■□□□ 1.68
NUP50-207ENST00000424634 INSRP06213 1382 aa25.56■■□□□ 1.68
NUP50-207ENST00000424634 MEGF6O75095 1541 aa25.56■■□□□ 1.68
NUP50-207ENST00000424634 CGNL1Q0VF96 1302 aa25.55■■□□□ 1.68
NUP50-207ENST00000424634 FLT4P35916 1363 aa25.55■■□□□ 1.68
NUP50-207ENST00000424634 KIF24Q5T7B8 1368 aa25.55■■□□□ 1.68
NUP50-207ENST00000424634 SHANK3Q9BYB0 1731 aa25.54■■□□□ 1.68
NUP50-207ENST00000424634 BTAF1O14981 1849 aa25.54■■□□□ 1.68
NUP50-207ENST00000424634 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms