RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CAMTA1Q9Y6Y1 1673 aa34.67■■■■□ 3.14
TSPAN3-203ENST00000424443 RBM6P78332 1123 aaKnown RBP34.66■■■■□ 3.14
TSPAN3-203ENST00000424443 AMPHP49418 695 aa34.65■■■■□ 3.14
TSPAN3-203ENST00000424443 RRS1Q15050 365 aaKnown RBP34.65■■■■□ 3.14
TSPAN3-203ENST00000424443 MAP3K19Q56UN5 1328 aa34.64■■■■□ 3.14
TSPAN3-203ENST00000424443 TNNT2P45379 298 aaPredicted RBP34.64■■■■□ 3.14
TSPAN3-203ENST00000424443 GJD4Q96KN9 370 aaPredicted RBP34.64■■■■□ 3.14
TSPAN3-203ENST00000424443 AXIN2Q9Y2T1 843 aa34.64■■■■□ 3.14
TSPAN3-203ENST00000424443 ABCC6O95255 1503 aa34.64■■■■□ 3.14
TSPAN3-203ENST00000424443 COL18A1P39060 1754 aa34.63■■■■□ 3.13
TSPAN3-203ENST00000424443 CC2D1BQ5T0F9 858 aaKnown RBP34.63■■■■□ 3.13
TSPAN3-203ENST00000424443 ZNF316A6NFI3 1004 aaPredicted RBP34.62■■■■□ 3.13
TSPAN3-203ENST00000424443 DDX10Q13206 875 aaKnown RBP34.61■■■■□ 3.13
TSPAN3-203ENST00000424443 CNGB1Q14028 1251 aaPredicted RBP34.61■■■■□ 3.13
TSPAN3-203ENST00000424443 COL5A2P05997 1499 aaPredicted RBP34.61■■■■□ 3.13
TSPAN3-203ENST00000424443 IP6K1Q92551 441 aa34.6■■■■□ 3.13
TSPAN3-203ENST00000424443 CSB-PGBD3P0DP91 1061 aa34.6■■■■□ 3.13
TSPAN3-203ENST00000424443 NPC1L1Q9UHC9 1359 aa34.58■■■■□ 3.13
TSPAN3-203ENST00000424443 RGPD5Q99666 1765 aa34.57■■■■□ 3.13
TSPAN3-203ENST00000424443 LARP1Q6PKG0 1096 aaKnown RBP34.57■■■■□ 3.12
TSPAN3-203ENST00000424443 RTL1A6NKG5 1358 aa34.57■■■■□ 3.12
TSPAN3-203ENST00000424443 BLMP54132 1417 aaPredicted RBP34.57■■■■□ 3.12
TSPAN3-203ENST00000424443 PPM1GO15355 546 aaPredicted RBP34.56■■■■□ 3.12
TSPAN3-203ENST00000424443 HOXC9P31274 260 aa34.56■■■■□ 3.12
TSPAN3-203ENST00000424443 TOM1L2Q6ZVM7 507 aa34.55■■■■□ 3.12
TSPAN3-203ENST00000424443 SPATA31A5Q5VU36 1347 aa34.55■■■■□ 3.12
TSPAN3-203ENST00000424443 SPATA31A7Q8IWB4 1347 aa34.55■■■■□ 3.12
TSPAN3-203ENST00000424443 KIF24Q5T7B8 1368 aa34.54■■■■□ 3.12
TSPAN3-203ENST00000424443 WDR17Q8IZU2 1322 aa34.54■■■■□ 3.12
TSPAN3-203ENST00000424443 USP35Q9P2H5 1018 aa34.54■■■■□ 3.12
TSPAN3-203ENST00000424443 EMILIN1Q9Y6C2 1016 aa34.54■■■■□ 3.12
TSPAN3-203ENST00000424443 MAP2P11137 1827 aaKnown RBP34.53■■■■□ 3.12
TSPAN3-203ENST00000424443 FLT4P35916 1363 aa34.52■■■■□ 3.12
TSPAN3-203ENST00000424443 ANKRD24Q8TF21 1146 aa34.52■■■■□ 3.12
TSPAN3-203ENST00000424443 CRB1P82279 1406 aa34.52■■■■□ 3.12
TSPAN3-203ENST00000424443 SPATA31A1Q5TZJ5 1347 aa34.51■■■■□ 3.12
TSPAN3-203ENST00000424443 POLKQ9UBT6 870 aa34.51■■■■□ 3.12
TSPAN3-203ENST00000424443 GLI3P10071 1580 aa34.51■■■■□ 3.12
TSPAN3-203ENST00000424443 ERBB3P21860 1342 aa34.51■■■■□ 3.11
TSPAN3-203ENST00000424443 ILDR2Q71H61 639 aa34.5■■■■□ 3.11
TSPAN3-203ENST00000424443 LTV1Q96GA3 475 aaPredicted RBP34.5■■■■□ 3.11
TSPAN3-203ENST00000424443 CDK12Q9NYV4 1490 aaPredicted RBP34.49■■■■□ 3.11
TSPAN3-203ENST00000424443 A0A0G2JS52 829 aa34.48■■■■□ 3.11
TSPAN3-203ENST00000424443 MYT1Q01538 1121 aa34.48■■■■□ 3.11
TSPAN3-203ENST00000424443 FAM98CQ17RN3 349 aaKnown RBP34.47■■■■□ 3.11
TSPAN3-203ENST00000424443 SMG6Q86US8 1419 aaKnown RBP34.46■■■■□ 3.11
TSPAN3-203ENST00000424443 TCP11L2Q8N4U5 519 aa34.46■■■■□ 3.11
TSPAN3-203ENST00000424443 NLRP2Q9NX02 1062 aa34.46■■■■□ 3.11
TSPAN3-203ENST00000424443 HSP90AB2PQ58FF8 381 aa34.45■■■■□ 3.11
TSPAN3-203ENST00000424443 PEAK1Q9H792 1746 aa34.45■■■■□ 3.11
TSPAN3-203ENST00000424443 THRAP3Q9Y2W1 955 aaKnown RBP34.45■■■■□ 3.1
TSPAN3-203ENST00000424443 INSRP06213 1382 aa34.44■■■■□ 3.1
TSPAN3-203ENST00000424443 CARD10Q9BWT7 1032 aa34.44■■■■□ 3.1
TSPAN3-203ENST00000424443 RGS12O14924 1447 aa34.43■■■■□ 3.1
TSPAN3-203ENST00000424443 ONECUT3O60422 494 aaPredicted RBP34.4■■■■□ 3.1
TSPAN3-203ENST00000424443 BARGINQ6ZT62 677 aa34.4■■■■□ 3.1
TSPAN3-203ENST00000424443 SEPT12Q8IYM1 358 aa34.4■■■■□ 3.1
TSPAN3-203ENST00000424443 FAM208AQ9UK61 1670 aaKnown RBP34.39■■■■□ 3.1
TSPAN3-203ENST00000424443 MTHFSP49914 203 aa34.35■■■■□ 3.09
TSPAN3-203ENST00000424443 CDCA7Q9BWT1 371 aaPredicted RBP34.31■■■■□ 3.08
TSPAN3-203ENST00000424443 NBPF6Q5VWK0 638 aa34.29■■■■□ 3.08
TSPAN3-203ENST00000424443 NBPF4Q96M43 638 aa34.29■■■■□ 3.08
TSPAN3-203ENST00000424443 THSD7AQ9UPZ6 1657 aa34.28■■■■□ 3.08
TSPAN3-203ENST00000424443 EIF4A2Q14240 407 aaKnown RBP34.28■■■■□ 3.08
TSPAN3-203ENST00000424443 RGPD2P0DJD1 1756 aa34.27■■■■□ 3.08
TSPAN3-203ENST00000424443 PPP2R1AP30153 589 aa34.26■■■■□ 3.08
TSPAN3-203ENST00000424443 RALBP1Q15311 655 aa34.26■■■■□ 3.08
TSPAN3-203ENST00000424443 PARD3Q8TEW0 1356 aa34.26■■■■□ 3.07
TSPAN3-203ENST00000424443 IL2RBP14784 551 aa34.25■■■■□ 3.07
TSPAN3-203ENST00000424443 KRT27Q7Z3Y8 459 aa34.25■■■■□ 3.07
TSPAN3-203ENST00000424443 USHBP1Q8N6Y0 703 aa34.25■■■■□ 3.07
TSPAN3-203ENST00000424443 PDE3BQ13370 1112 aa34.24■■■■□ 3.07
TSPAN3-203ENST00000424443 BRWD3Q6RI45 1802 aa34.23■■■■□ 3.07
TSPAN3-203ENST00000424443 WNK3Q9BYP7 1800 aa34.23■■■■□ 3.07
TSPAN3-203ENST00000424443 DDB1Q16531 1140 aa34.23■■■■□ 3.07
TSPAN3-203ENST00000424443 CFAP53Q96M91 514 aa34.23■■■■□ 3.07
TSPAN3-203ENST00000424443 PARP4Q9UKK3 1724 aaKnown RBP34.22■■■■□ 3.07
TSPAN3-203ENST00000424443 EYA1Q99502 592 aa34.21■■■■□ 3.07
TSPAN3-203ENST00000424443 DISP2A7MBM2 1401 aa34.2■■■■□ 3.07
TSPAN3-203ENST00000424443 EXOC5O00471 708 aa34.2■■■■□ 3.06
TSPAN3-203ENST00000424443 RAPGEF4Q8WZA2 1011 aa34.2■■■■□ 3.06
TSPAN3-203ENST00000424443 DIAPH1O60610 1272 aaKnown RBP34.19■■■■□ 3.06
TSPAN3-203ENST00000424443 TATP17735 454 aaPredicted RBP34.15■■■■□ 3.06
TSPAN3-203ENST00000424443 IL13P35225 146 aa34.15■■■■□ 3.06
TSPAN3-203ENST00000424443 LRRC37A3O60309 1634 aa34.15■■■■□ 3.06
TSPAN3-203ENST00000424443 IGSF1Q8N6C5 1336 aa34.13■■■■□ 3.05
TSPAN3-203ENST00000424443 PRKRIP1Q9H875 184 aaPredicted RBP34.12■■■■□ 3.05
TSPAN3-203ENST00000424443 MYBBP1AQ9BQG0 1328 aaKnown RBP34.11■■■■□ 3.05
TSPAN3-203ENST00000424443 TNS2Q63HR2 1409 aa34.1■■■■□ 3.05
TSPAN3-203ENST00000424443 MEGF6O75095 1541 aa34.1■■■■□ 3.05
TSPAN3-203ENST00000424443 NCAPD2Q15021 1401 aa34.1■■■■□ 3.05
TSPAN3-203ENST00000424443 FAM182BQ5T319 152 aa34.09■■■■□ 3.05
TSPAN3-203ENST00000424443 NUDCQ9Y266 331 aa34.09■■■■□ 3.05
TSPAN3-203ENST00000424443 SOCS7O14512 581 aa34.08■■■■□ 3.05
TSPAN3-203ENST00000424443 U2SURPO15042 1029 aaKnown RBP34.08■■■■□ 3.05
TSPAN3-203ENST00000424443 ZCRB1Q8TBF4 217 aaKnown RBP34.08■■■■□ 3.05
TSPAN3-203ENST00000424443 COL3A1P02461 1466 aaPredicted RBP34.08■■■■□ 3.05
TSPAN3-203ENST00000424443 SULT6B1Q6IMI4 303 aa34.07■■■■□ 3.04
TSPAN3-203ENST00000424443 OVOS2A0A0G2JMS6 1433 aa34.07■■■■□ 3.04
TSPAN3-203ENST00000424443 ANP32CO43423 234 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms