RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 LRRC37A3O60309 1634 aa23.68■■□□□ 1.38
CCDC78-203ENST00000423653 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
CCDC78-203ENST00000423653 WDR17Q8IZU2 1322 aa23.67■■□□□ 1.38
CCDC78-203ENST00000423653 SOX12O15370 315 aa23.67■■□□□ 1.38
CCDC78-203ENST00000423653 TOM1L2Q6ZVM7 507 aa23.67■■□□□ 1.38
CCDC78-203ENST00000423653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
CCDC78-203ENST00000423653 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
CCDC78-203ENST00000423653 C11orf95C9JLR9 678 aaPredicted RBP23.65■■□□□ 1.38
CCDC78-203ENST00000423653 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
CCDC78-203ENST00000423653 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
CCDC78-203ENST00000423653 TRIM37O94972 964 aa23.64■■□□□ 1.37
CCDC78-203ENST00000423653 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-203ENST00000423653 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 TESK2Q96S53 571 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
CCDC78-203ENST00000423653 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
CCDC78-203ENST00000423653 CDCA7Q9BWT1 371 aaPredicted RBP23.62■■□□□ 1.37
CCDC78-203ENST00000423653 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
CCDC78-203ENST00000423653 SRCAPQ6ZRS2 3230 aa23.62■■□□□ 1.37
CCDC78-203ENST00000423653 LTN1O94822 1766 aa23.62■■□□□ 1.37
CCDC78-203ENST00000423653 USP47Q96K76 1375 aa23.62■■□□□ 1.37
CCDC78-203ENST00000423653 NME9Q86XW9 330 aa23.61■■□□□ 1.37
CCDC78-203ENST00000423653 LRP5O75197 1615 aa23.6■■□□□ 1.37
CCDC78-203ENST00000423653 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
CCDC78-203ENST00000423653 PEAK1Q9H792 1746 aa23.59■■□□□ 1.37
CCDC78-203ENST00000423653 DDB1Q16531 1140 aa23.59■■□□□ 1.37
CCDC78-203ENST00000423653 CCDC7Q96M83 1385 aa23.59■■□□□ 1.37
CCDC78-203ENST00000423653 RREB1Q92766 1687 aa23.58■■□□□ 1.37
CCDC78-203ENST00000423653 CARD10Q9BWT7 1032 aa23.58■■□□□ 1.37
CCDC78-203ENST00000423653 APBA3O96018 575 aa23.57■■□□□ 1.36
CCDC78-203ENST00000423653 TIMELESSQ9UNS1 1208 aa23.56■■□□□ 1.36
CCDC78-203ENST00000423653 ANKRD36BQ8N2N9 1353 aa23.55■■□□□ 1.36
CCDC78-203ENST00000423653 TMF1P82094 1093 aa23.55■■□□□ 1.36
CCDC78-203ENST00000423653 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
CCDC78-203ENST00000423653 CAMKK2Q96RR4 588 aa23.55■■□□□ 1.36
CCDC78-203ENST00000423653 RGPD3A6NKT7 1758 aaPredicted RBP23.54■■□□□ 1.36
CCDC78-203ENST00000423653 RGPD4Q7Z3J3 1758 aa23.54■■□□□ 1.36
CCDC78-203ENST00000423653 ERBB3P21860 1342 aa23.54■■□□□ 1.36
CCDC78-203ENST00000423653 NUP188Q5SRE5 1749 aa23.53■■□□□ 1.36
CCDC78-203ENST00000423653 PSDA5PKW4 1024 aaPredicted RBP23.53■■□□□ 1.36
CCDC78-203ENST00000423653 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
CCDC78-203ENST00000423653 TNS2Q63HR2 1409 aa23.52■■□□□ 1.36
CCDC78-203ENST00000423653 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
CCDC78-203ENST00000423653 BCL9O00512 1426 aa23.51■■□□□ 1.35
CCDC78-203ENST00000423653 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
CCDC78-203ENST00000423653 COG3Q96JB2 828 aa23.5■■□□□ 1.35
CCDC78-203ENST00000423653 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
CCDC78-203ENST00000423653 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
CCDC78-203ENST00000423653 NLRP2Q9NX02 1062 aa23.48■■□□□ 1.35
CCDC78-203ENST00000423653 EXOC5O00471 708 aa23.46■■□□□ 1.35
CCDC78-203ENST00000423653 ANKRD24Q8TF21 1146 aa23.46■■□□□ 1.35
CCDC78-203ENST00000423653 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-203ENST00000423653 NBPF14Q5TI25 921 aa23.44■■□□□ 1.34
CCDC78-203ENST00000423653 BCL11BQ9C0K0 894 aaPredicted RBP23.44■■□□□ 1.34
CCDC78-203ENST00000423653 KIF20BQ96Q89 1820 aa23.44■■□□□ 1.34
CCDC78-203ENST00000423653 IP6K1Q92551 441 aa23.43■■□□□ 1.34
CCDC78-203ENST00000423653 MYOM1P52179 1685 aa23.43■■□□□ 1.34
CCDC78-203ENST00000423653 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
CCDC78-203ENST00000423653 IL2RBP14784 551 aa23.42■■□□□ 1.34
CCDC78-203ENST00000423653 PLSCR1O15162 318 aa23.41■■□□□ 1.34
CCDC78-203ENST00000423653 NHSQ6T4R5 1651 aa23.41■■□□□ 1.34
CCDC78-203ENST00000423653 MAP3K19Q56UN5 1328 aa23.39■■□□□ 1.34
CCDC78-203ENST00000423653 AMPHP49418 695 aa23.38■■□□□ 1.33
CCDC78-203ENST00000423653 HOXC9P31274 260 aa23.37■■□□□ 1.33
CCDC78-203ENST00000423653 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
CCDC78-203ENST00000423653 FYB1O15117 783 aa23.35■■□□□ 1.33
CCDC78-203ENST00000423653 LTV1Q96GA3 475 aaPredicted RBP23.35■■□□□ 1.33
CCDC78-203ENST00000423653 GGNBP2Q9H3C7 697 aa23.35■■□□□ 1.33
CCDC78-203ENST00000423653 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
CCDC78-203ENST00000423653 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.32
CCDC78-203ENST00000423653 PTF1AQ7RTS3 328 aa23.32■■□□□ 1.32
CCDC78-203ENST00000423653 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
CCDC78-203ENST00000423653 RRS1Q15050 365 aaKnown RBP23.3■■□□□ 1.32
CCDC78-203ENST00000423653 FLT4P35916 1363 aa23.29■■□□□ 1.32
CCDC78-203ENST00000423653 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
CCDC78-203ENST00000423653 BTAF1O14981 1849 aa23.29■■□□□ 1.32
CCDC78-203ENST00000423653 FBLN1P23142 703 aa23.28■■□□□ 1.32
CCDC78-203ENST00000423653 KCNQ2O43526 872 aa23.27■■□□□ 1.32
CCDC78-203ENST00000423653 TXNRD1Q16881 649 aa23.27■■□□□ 1.32
CCDC78-203ENST00000423653 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
CCDC78-203ENST00000423653 EIF4G2P78344 907 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCDC78-203ENST00000423653 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
CCDC78-203ENST00000423653 MEGF6O75095 1541 aa23.26■■□□□ 1.31
CCDC78-203ENST00000423653 CASZ1Q86V15 1759 aa23.26■■□□□ 1.31
CCDC78-203ENST00000423653 INSRP06213 1382 aa23.26■■□□□ 1.31
CCDC78-203ENST00000423653 ANKRD26Q9UPS8 1709 aa23.25■■□□□ 1.31
CCDC78-203ENST00000423653 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
CCDC78-203ENST00000423653 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
CCDC78-203ENST00000423653 CARD14Q9BXL6 1004 aa23.24■■□□□ 1.31
CCDC78-203ENST00000423653 SPON1Q9HCB6 807 aa23.24■■□□□ 1.31
CCDC78-203ENST00000423653 DOT1LQ8TEK3 1739 aa23.24■■□□□ 1.31
CCDC78-203ENST00000423653 PROM2Q8N271 834 aa23.23■■□□□ 1.31
CCDC78-203ENST00000423653 DDX54Q8TDD1 881 aaKnown RBP23.23■■□□□ 1.31
CCDC78-203ENST00000423653 STK32BQ9NY57 414 aa23.23■■□□□ 1.31
CCDC78-203ENST00000423653 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
CCDC78-203ENST00000423653 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
CCDC78-203ENST00000423653 PAPPAQ13219 1627 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms