RNA–Protein interactions for RNA: ENST00000423555.6

SMARCA2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-212ENST00000423555 C4orf48Q5BLP8 95 aa11.71□□□□□ -0.53
SMARCA2-212ENST00000423555 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L21D6R901 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 AGERQ15109 404 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
SMARCA2-212ENST00000423555 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-212ENST00000423555 RASA1P20936 1047 aa11.69□□□□□ -0.54
SMARCA2-212ENST00000423555 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
SMARCA2-212ENST00000423555 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
SMARCA2-212ENST00000423555 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 PTK7Q13308 1070 aa11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 TMCO4Q5TGY1 634 aa11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 BPHLQ86WA6 291 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-212ENST00000423555 LARP1Q6PKG0 1096 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-212ENST00000423555 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 EML3Q32P44 896 aa11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 MAP7D1Q3KQU3 841 aa11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 IVNS1ABPQ9Y6Y0 642 aa11.66□□□□□ -0.54
SMARCA2-212ENST00000423555 LZTS3O60299 673 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-212ENST00000423555 SH3BP2P78314 561 aa11.64□□□□□ -0.55
SMARCA2-212ENST00000423555 NPM2Q86SE8 214 aaKnown RBP11.64□□□□□ -0.55
SMARCA2-212ENST00000423555 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
SMARCA2-212ENST00000423555 DOLKQ9UPQ8 538 aa11.64□□□□□ -0.55
SMARCA2-212ENST00000423555 CLDN10P78369 228 aa11.63□□□□□ -0.55
SMARCA2-212ENST00000423555 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
SMARCA2-212ENST00000423555 SLAIN2Q9P270 581 aa11.63□□□□□ -0.55
SMARCA2-212ENST00000423555 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 ANKMY2Q8IV38 441 aa11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 FAM200AQ8TCP9 573 aa11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 SLC10A4Q96EP9 437 aa11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 CDCA7Q9BWT1 371 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-212ENST00000423555 FAM69CQ0P6D2 419 aa11.61□□□□□ -0.55
SMARCA2-212ENST00000423555 DPYDQ12882 1025 aa11.61□□□□□ -0.55
SMARCA2-212ENST00000423555 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
SMARCA2-212ENST00000423555 NOD1Q9Y239 953 aa11.61□□□□□ -0.55
SMARCA2-212ENST00000423555 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
SMARCA2-212ENST00000423555 KIAA1024Q9UPX6 916 aa11.6□□□□□ -0.55
SMARCA2-212ENST00000423555 PLA2G2CQ5R387 149 aa11.59□□□□□ -0.55
SMARCA2-212ENST00000423555 DNAAF2Q9NVR5 837 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-212ENST00000423555 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
SMARCA2-212ENST00000423555 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
SMARCA2-212ENST00000423555 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
SMARCA2-212ENST00000423555 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
SMARCA2-212ENST00000423555 KCNC4Q03721 635 aa11.57□□□□□ -0.56
SMARCA2-212ENST00000423555 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
SMARCA2-212ENST00000423555 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
SMARCA2-212ENST00000423555 ESPNB1AK53 854 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 ZBTB24O43167 697 aaPredicted RBP11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 DKK1O94907 266 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 ATP1A2P50993 1020 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 RAB15P59190 212 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 GTF2IP78347 998 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 NBPF20Q3BBV1 942 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 PCDHB11Q9Y5F2 797 aa11.56□□□□□ -0.56
SMARCA2-212ENST00000423555 SSFA2P28290 1259 aa11.55□□□□□ -0.56
SMARCA2-212ENST00000423555 SKOR1P84550 965 aa11.55□□□□□ -0.56
SMARCA2-212ENST00000423555 TRIM32Q13049 653 aa11.55□□□□□ -0.56
SMARCA2-212ENST00000423555 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
SMARCA2-212ENST00000423555 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-212ENST00000423555 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-212ENST00000423555 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-212ENST00000423555 GNEQ9Y223 722 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-212ENST00000423555 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
SMARCA2-212ENST00000423555 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 CCDC102BQ68D86 513 aa11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 TXNDC2Q86VQ3 553 aa11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 SIX5Q8N196 739 aa11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
SMARCA2-212ENST00000423555 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 ATP2B4P23634 1241 aa11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 SCNN1AP37088 669 aa11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 TPCN2Q8NHX9 752 aa11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 CDV3Q9UKY7 258 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-212ENST00000423555 LGR5O75473 907 aa11.5□□□□□ -0.57
SMARCA2-212ENST00000423555 PSME1Q06323 249 aa11.5□□□□□ -0.57
SMARCA2-212ENST00000423555 USP4Q13107 963 aa11.5□□□□□ -0.57
SMARCA2-212ENST00000423555 SWI5Q1ZZU3 235 aa11.5□□□□□ -0.57
SMARCA2-212ENST00000423555 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
SMARCA2-212ENST00000423555 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms