RNA–Protein interactions for RNA: ENST00000423555.6

SMARCA2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-212ENST00000423555 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
SMARCA2-212ENST00000423555 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
SMARCA2-212ENST00000423555 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
SMARCA2-212ENST00000423555 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
SMARCA2-212ENST00000423555 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
SMARCA2-212ENST00000423555 FOXD1Q16676 465 aa21.69■■□□□ 1.06
SMARCA2-212ENST00000423555 ADRA2BP18089 450 aa21.52■■□□□ 1.04
SMARCA2-212ENST00000423555 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
SMARCA2-212ENST00000423555 KCNA4P22459 653 aa20.66■□□□□ 0.9
SMARCA2-212ENST00000423555 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
SMARCA2-212ENST00000423555 PPP4R3CPQ6ZMV5 832 aa20.28■□□□□ 0.84
SMARCA2-212ENST00000423555 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
SMARCA2-212ENST00000423555 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
SMARCA2-212ENST00000423555 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
SMARCA2-212ENST00000423555 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
SMARCA2-212ENST00000423555 MSH5O43196 834 aa19.62■□□□□ 0.73
SMARCA2-212ENST00000423555 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
SMARCA2-212ENST00000423555 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
SMARCA2-212ENST00000423555 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
SMARCA2-212ENST00000423555 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
SMARCA2-212ENST00000423555 ZBTB22O15209 634 aa19.06■□□□□ 0.64
SMARCA2-212ENST00000423555 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
SMARCA2-212ENST00000423555 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
SMARCA2-212ENST00000423555 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
SMARCA2-212ENST00000423555 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
SMARCA2-212ENST00000423555 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
SMARCA2-212ENST00000423555 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
SMARCA2-212ENST00000423555 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
SMARCA2-212ENST00000423555 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
SMARCA2-212ENST00000423555 ATXN8OSP0DMR3 200 aa17.95■□□□□ 0.46
SMARCA2-212ENST00000423555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMARCA2-212ENST00000423555 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
SMARCA2-212ENST00000423555 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
SMARCA2-212ENST00000423555 FKBP8Q14318 412 aa17.58■□□□□ 0.4
SMARCA2-212ENST00000423555 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
SMARCA2-212ENST00000423555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
SMARCA2-212ENST00000423555 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
SMARCA2-212ENST00000423555 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
SMARCA2-212ENST00000423555 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-212ENST00000423555 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-212ENST00000423555 APLP2Q06481 763 aa17.15■□□□□ 0.34
SMARCA2-212ENST00000423555 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
SMARCA2-212ENST00000423555 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
SMARCA2-212ENST00000423555 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
SMARCA2-212ENST00000423555 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-212ENST00000423555 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
SMARCA2-212ENST00000423555 CAPN15O75808 1086 aa16.83■□□□□ 0.28
SMARCA2-212ENST00000423555 POLA2Q14181 598 aa16.83■□□□□ 0.28
SMARCA2-212ENST00000423555 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SMARCA2-212ENST00000423555 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
SMARCA2-212ENST00000423555 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
SMARCA2-212ENST00000423555 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
SMARCA2-212ENST00000423555 PROM2Q8N271 834 aa16.64■□□□□ 0.25
SMARCA2-212ENST00000423555 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
SMARCA2-212ENST00000423555 ABCB7O75027 752 aa16.63■□□□□ 0.25
SMARCA2-212ENST00000423555 VASPP50552 380 aaPredicted RBP16.47■□□□□ 0.23
SMARCA2-212ENST00000423555 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
SMARCA2-212ENST00000423555 DSG3P32926 999 aa16.38■□□□□ 0.21
SMARCA2-212ENST00000423555 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
SMARCA2-212ENST00000423555 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
SMARCA2-212ENST00000423555 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SMARCA2-212ENST00000423555 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
SMARCA2-212ENST00000423555 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
SMARCA2-212ENST00000423555 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
SMARCA2-212ENST00000423555 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
SMARCA2-212ENST00000423555 PKD2Q13563 968 aa16.07■□□□□ 0.16
SMARCA2-212ENST00000423555 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMARCA2-212ENST00000423555 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
SMARCA2-212ENST00000423555 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
SMARCA2-212ENST00000423555 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
SMARCA2-212ENST00000423555 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
SMARCA2-212ENST00000423555 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
SMARCA2-212ENST00000423555 PLCD3Q8N3E9 789 aa15.94■□□□□ 0.14
SMARCA2-212ENST00000423555 PLCB2Q00722 1185 aa15.92■□□□□ 0.14
SMARCA2-212ENST00000423555 MIER1Q8N108 512 aa15.9■□□□□ 0.14
SMARCA2-212ENST00000423555 ECM2O94769 699 aaPredicted RBP15.81■□□□□ 0.12
SMARCA2-212ENST00000423555 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
SMARCA2-212ENST00000423555 RGL2O15211 777 aa15.68■□□□□ 0.1
SMARCA2-212ENST00000423555 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMARCA2-212ENST00000423555 PLEKHG5O94827 1062 aa15.66■□□□□ 0.1
SMARCA2-212ENST00000423555 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-212ENST00000423555 ZBTB47Q9UFB7 747 aaPredicted RBP15.62■□□□□ 0.09
SMARCA2-212ENST00000423555 BBXQ8WY36 941 aaPredicted RBP15.58■□□□□ 0.08
SMARCA2-212ENST00000423555 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.55■□□□□ 0.08
SMARCA2-212ENST00000423555 PAXIP1Q6ZW49 1069 aaPredicted RBP15.5■□□□□ 0.07
SMARCA2-212ENST00000423555 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
SMARCA2-212ENST00000423555 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
SMARCA2-212ENST00000423555 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
SMARCA2-212ENST00000423555 CFAP44Q96MT7 982 aa15.48■□□□□ 0.07
SMARCA2-212ENST00000423555 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
SMARCA2-212ENST00000423555 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
SMARCA2-212ENST00000423555 NUBP1P53384 320 aa15.43■□□□□ 0.06
SMARCA2-212ENST00000423555 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
SMARCA2-212ENST00000423555 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
SMARCA2-212ENST00000423555 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
SMARCA2-212ENST00000423555 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
SMARCA2-212ENST00000423555 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
SMARCA2-212ENST00000423555 GSE1Q14687 1217 aa15.38■□□□□ 0.05
SMARCA2-212ENST00000423555 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
SMARCA2-212ENST00000423555 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms