RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 CPDO75976 1380 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 COL18A1P39060 1754 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 SOX12O15370 315 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 FCHSD2O94868 740 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 HOXC9P31274 260 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 IP6K1Q92551 441 aa12.08□□□□□ -0.48
LINC01399-201ENST00000423311 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
LINC01399-201ENST00000423311 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
LINC01399-201ENST00000423311 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
LINC01399-201ENST00000423311 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
LINC01399-201ENST00000423311 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC01399-201ENST00000423311 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
LINC01399-201ENST00000423311 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
LINC01399-201ENST00000423311 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
LINC01399-201ENST00000423311 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
LINC01399-201ENST00000423311 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
LINC01399-201ENST00000423311 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
LINC01399-201ENST00000423311 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
LINC01399-201ENST00000423311 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 NEFMP07197 916 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 KDRP35968 1356 aa12.03□□□□□ -0.48
LINC01399-201ENST00000423311 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
LINC01399-201ENST00000423311 CABLES1Q8TDN4 633 aa12.02□□□□□ -0.49
LINC01399-201ENST00000423311 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
LINC01399-201ENST00000423311 APAF1O14727 1248 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 KIAA0232Q92628 1395 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
LINC01399-201ENST00000423311 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
LINC01399-201ENST00000423311 CCDC27Q2M243 656 aa12□□□□□ -0.49
LINC01399-201ENST00000423311 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
LINC01399-201ENST00000423311 EYA1Q99502 592 aa12□□□□□ -0.49
LINC01399-201ENST00000423311 HMOX1P09601 288 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 ERBB3P21860 1342 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
LINC01399-201ENST00000423311 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
LINC01399-201ENST00000423311 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
LINC01399-201ENST00000423311 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
LINC01399-201ENST00000423311 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
LINC01399-201ENST00000423311 PRDM11Q9NQV5 511 aa11.98□□□□□ -0.49
LINC01399-201ENST00000423311 JCADQ9P266 1359 aa11.97□□□□□ -0.49
LINC01399-201ENST00000423311 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
LINC01399-201ENST00000423311 NFE2L2Q16236 605 aa11.96□□□□□ -0.49
LINC01399-201ENST00000423311 NBPF6Q5VWK0 638 aa11.96□□□□□ -0.49
LINC01399-201ENST00000423311 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
LINC01399-201ENST00000423311 NBPF4Q96M43 638 aa11.96□□□□□ -0.49
LINC01399-201ENST00000423311 NWD2Q9ULI1 1742 aa11.96□□□□□ -0.49
LINC01399-201ENST00000423311 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.5
LINC01399-201ENST00000423311 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
LINC01399-201ENST00000423311 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
LINC01399-201ENST00000423311 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
LINC01399-201ENST00000423311 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
LINC01399-201ENST00000423311 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
LINC01399-201ENST00000423311 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
LINC01399-201ENST00000423311 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
LINC01399-201ENST00000423311 FAM83GA6ND36 823 aa11.94□□□□□ -0.5
LINC01399-201ENST00000423311 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
LINC01399-201ENST00000423311 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
LINC01399-201ENST00000423311 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
LINC01399-201ENST00000423311 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
LINC01399-201ENST00000423311 RIPK4P57078 832 aa11.93□□□□□ -0.5
LINC01399-201ENST00000423311 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
LINC01399-201ENST00000423311 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
LINC01399-201ENST00000423311 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
LINC01399-201ENST00000423311 IL16Q14005 1332 aa11.92□□□□□ -0.5
LINC01399-201ENST00000423311 NRAPQ86VF7 1730 aa11.92□□□□□ -0.5
LINC01399-201ENST00000423311 CALD1Q05682 793 aaKnown RBP11.92□□□□□ -0.5
LINC01399-201ENST00000423311 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
LINC01399-201ENST00000423311 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
LINC01399-201ENST00000423311 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
LINC01399-201ENST00000423311 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
LINC01399-201ENST00000423311 E9PSI1 815 aa11.91□□□□□ -0.5
LINC01399-201ENST00000423311 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
LINC01399-201ENST00000423311 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
LINC01399-201ENST00000423311 AMOTQ4VCS5 1084 aa11.91□□□□□ -0.5
LINC01399-201ENST00000423311 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
LINC01399-201ENST00000423311 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
LINC01399-201ENST00000423311 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
LINC01399-201ENST00000423311 CRB1P82279 1406 aa11.9□□□□□ -0.5
LINC01399-201ENST00000423311 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
LINC01399-201ENST00000423311 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
LINC01399-201ENST00000423311 CARD10Q9BWT7 1032 aa11.9□□□□□ -0.5
LINC01399-201ENST00000423311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01399-201ENST00000423311 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
LINC01399-201ENST00000423311 WNK3Q9BYP7 1800 aa11.89□□□□□ -0.51
LINC01399-201ENST00000423311 HSPA1LP34931 641 aa11.89□□□□□ -0.51
LINC01399-201ENST00000423311 EVA1CP58658 441 aa11.89□□□□□ -0.51
LINC01399-201ENST00000423311 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
LINC01399-201ENST00000423311 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
LINC01399-201ENST00000423311 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms