RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
UFD1-203ENST00000421968 LOC105371045A0A1W2PR82 267 aa18.06■□□□□ 0.48
UFD1-203ENST00000421968 BCL9O00512 1426 aa18.06■□□□□ 0.48
UFD1-203ENST00000421968 ADCY9O60503 1353 aa18.05■□□□□ 0.48
UFD1-203ENST00000421968 SLC16A10Q8TF71 515 aa18.05■□□□□ 0.48
UFD1-203ENST00000421968 COL5A2P05997 1499 aaPredicted RBP18.05■□□□□ 0.48
UFD1-203ENST00000421968 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
UFD1-203ENST00000421968 CPDO75976 1380 aa18.04■□□□□ 0.48
UFD1-203ENST00000421968 KIF3CO14782 793 aa18.04■□□□□ 0.48
UFD1-203ENST00000421968 ZNF827Q17R98 1081 aa18.04■□□□□ 0.48
UFD1-203ENST00000421968 AKAP12Q02952 1782 aa18.04■□□□□ 0.48
UFD1-203ENST00000421968 C14orf93Q9H972 538 aaKnown RBP18.03■□□□□ 0.48
UFD1-203ENST00000421968 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
UFD1-203ENST00000421968 PCDH10Q9P2E7 1040 aa18.02■□□□□ 0.48
UFD1-203ENST00000421968 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
UFD1-203ENST00000421968 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
UFD1-203ENST00000421968 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
UFD1-203ENST00000421968 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
UFD1-203ENST00000421968 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
UFD1-203ENST00000421968 WASLO00401 505 aaPredicted RBP17.99■□□□□ 0.47
UFD1-203ENST00000421968 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
UFD1-203ENST00000421968 JMYQ8N9B5 988 aa17.98■□□□□ 0.47
UFD1-203ENST00000421968 KLRG1Q96E93 195 aa17.98■□□□□ 0.47
UFD1-203ENST00000421968 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
UFD1-203ENST00000421968 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
UFD1-203ENST00000421968 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
UFD1-203ENST00000421968 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
UFD1-203ENST00000421968 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
UFD1-203ENST00000421968 TOMM70O94826 608 aa17.95■□□□□ 0.46
UFD1-203ENST00000421968 GCP02774 474 aa17.95■□□□□ 0.46
UFD1-203ENST00000421968 USP19O94966 1318 aa17.95■□□□□ 0.46
UFD1-203ENST00000421968 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
UFD1-203ENST00000421968 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
UFD1-203ENST00000421968 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
UFD1-203ENST00000421968 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
UFD1-203ENST00000421968 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
UFD1-203ENST00000421968 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
UFD1-203ENST00000421968 EXOC5O00471 708 aa17.93■□□□□ 0.46
UFD1-203ENST00000421968 HTRA3P83110 453 aa17.93■□□□□ 0.46
UFD1-203ENST00000421968 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
UFD1-203ENST00000421968 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
UFD1-203ENST00000421968 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
UFD1-203ENST00000421968 NUDT16Q96DE0 195 aaKnown RBP17.92■□□□□ 0.46
UFD1-203ENST00000421968 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
UFD1-203ENST00000421968 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
UFD1-203ENST00000421968 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
UFD1-203ENST00000421968 QSER1Q2KHR3 1735 aa17.91■□□□□ 0.46
UFD1-203ENST00000421968 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
UFD1-203ENST00000421968 ACEP12821 1306 aa17.89■□□□□ 0.45
UFD1-203ENST00000421968 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
UFD1-203ENST00000421968 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
UFD1-203ENST00000421968 USP6P35125 1406 aa17.87■□□□□ 0.45
UFD1-203ENST00000421968 BTAF1O14981 1849 aa17.86■□□□□ 0.45
UFD1-203ENST00000421968 POLR3AO14802 1390 aaPredicted RBP17.86■□□□□ 0.45
UFD1-203ENST00000421968 MSH5O43196 834 aa17.85■□□□□ 0.45
UFD1-203ENST00000421968 PCNTO95613 3336 aa17.85■□□□□ 0.45
UFD1-203ENST00000421968 CD2APQ9Y5K6 639 aa17.85■□□□□ 0.45
UFD1-203ENST00000421968 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
UFD1-203ENST00000421968 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
UFD1-203ENST00000421968 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
UFD1-203ENST00000421968 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
UFD1-203ENST00000421968 AXIN2Q9Y2T1 843 aa17.83■□□□□ 0.44
UFD1-203ENST00000421968 TNS2Q63HR2 1409 aa17.82■□□□□ 0.44
UFD1-203ENST00000421968 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
UFD1-203ENST00000421968 HSPA1AP0DMV8 641 aaKnown RBP17.81■□□□□ 0.44
UFD1-203ENST00000421968 HSPA1BP0DMV9 641 aaKnown RBP17.81■□□□□ 0.44
UFD1-203ENST00000421968 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
UFD1-203ENST00000421968 KCNQ4P56696 695 aa17.8■□□□□ 0.44
UFD1-203ENST00000421968 NMRK2Q9NPI5 230 aa17.8■□□□□ 0.44
UFD1-203ENST00000421968 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
UFD1-203ENST00000421968 PLEKHG3A1L390 1219 aa17.79■□□□□ 0.44
UFD1-203ENST00000421968 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
UFD1-203ENST00000421968 COL18A1P39060 1754 aa17.79■□□□□ 0.44
UFD1-203ENST00000421968 ADGRB1O14514 1584 aa17.79■□□□□ 0.44
UFD1-203ENST00000421968 NLRP6P59044 892 aa17.78■□□□□ 0.44
UFD1-203ENST00000421968 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
UFD1-203ENST00000421968 IGSF1Q8N6C5 1336 aa17.77■□□□□ 0.44
UFD1-203ENST00000421968 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
UFD1-203ENST00000421968 FSTL1Q12841 308 aa17.76■□□□□ 0.43
UFD1-203ENST00000421968 CCDC7Q96M83 1385 aa17.76■□□□□ 0.43
UFD1-203ENST00000421968 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
UFD1-203ENST00000421968 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
UFD1-203ENST00000421968 ABCC6O95255 1503 aa17.74■□□□□ 0.43
UFD1-203ENST00000421968 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
UFD1-203ENST00000421968 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
UFD1-203ENST00000421968 SLIT3O75094 1523 aa17.72■□□□□ 0.43
UFD1-203ENST00000421968 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
UFD1-203ENST00000421968 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
UFD1-203ENST00000421968 SOX12O15370 315 aa17.67■□□□□ 0.42
UFD1-203ENST00000421968 IL2RBP14784 551 aa17.67■□□□□ 0.42
UFD1-203ENST00000421968 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
UFD1-203ENST00000421968 CCNL1Q9UK58 526 aaPredicted RBP17.67■□□□□ 0.42
UFD1-203ENST00000421968 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
UFD1-203ENST00000421968 PIK3C2AO00443 1686 aa17.66■□□□□ 0.42
UFD1-203ENST00000421968 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
UFD1-203ENST00000421968 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
UFD1-203ENST00000421968 LY75O60449 1722 aa17.64■□□□□ 0.41
UFD1-203ENST00000421968 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
UFD1-203ENST00000421968 PRIM1P49642 420 aaKnown RBP17.62■□□□□ 0.41
UFD1-203ENST00000421968 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms