RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NUTM2BA6NNL0 878 aaPredicted RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 NUTM2EB1AL46 878 aaPredicted RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 MARSP56192 900 aaKnown RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 CBLBQ13191 982 aa10.56□□□□□ -0.72
SFXN1-202ENST00000421887 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 PRPF38BQ5VTL8 546 aaKnown RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
SFXN1-202ENST00000421887 NUTM2AQ8IVF1 878 aaPredicted RBP10.56□□□□□ -0.72
SFXN1-202ENST00000421887 VWA5B2Q8N398 1253 aa10.56□□□□□ -0.72
SFXN1-202ENST00000421887 NBPF14Q5TI25 921 aa10.55□□□□□ -0.72
SFXN1-202ENST00000421887 DNMT3AQ9Y6K1 912 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-202ENST00000421887 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
SFXN1-202ENST00000421887 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
SFXN1-202ENST00000421887 BICRAQ9NZM4 1560 aa10.54□□□□□ -0.72
SFXN1-202ENST00000421887 PPP1R26Q5T8A7 1209 aaPredicted RBP10.53□□□□□ -0.72
SFXN1-202ENST00000421887 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
SFXN1-202ENST00000421887 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
SFXN1-202ENST00000421887 SLC35F4A4IF30 521 aa10.52□□□□□ -0.73
SFXN1-202ENST00000421887 IGHA1P01876 353 aa10.52□□□□□ -0.73
SFXN1-202ENST00000421887 ITGA6P23229 1130 aa10.52□□□□□ -0.73
SFXN1-202ENST00000421887 SV2AQ7L0J3 742 aa10.52□□□□□ -0.73
SFXN1-202ENST00000421887 SH3BP5LQ7L8J4 393 aa10.52□□□□□ -0.73
SFXN1-202ENST00000421887 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
SFXN1-202ENST00000421887 SPINT1O43278 529 aa10.51□□□□□ -0.73
SFXN1-202ENST00000421887 ARHGEF15O94989 841 aa10.51□□□□□ -0.73
SFXN1-202ENST00000421887 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
SFXN1-202ENST00000421887 QPCTQ16769 361 aa10.5□□□□□ -0.73
SFXN1-202ENST00000421887 PARP9Q8IXQ6 854 aa10.5□□□□□ -0.73
SFXN1-202ENST00000421887 ZMYND10O75800 440 aa10.49□□□□□ -0.73
SFXN1-202ENST00000421887 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
SFXN1-202ENST00000421887 Q6ZVU0 165 aa10.49□□□□□ -0.73
SFXN1-202ENST00000421887 SCARF2Q96GP6 870 aaPredicted RBP10.49□□□□□ -0.73
SFXN1-202ENST00000421887 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
SFXN1-202ENST00000421887 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
SFXN1-202ENST00000421887 CTSOP43234 321 aaPredicted RBP10.47□□□□□ -0.73
SFXN1-202ENST00000421887 FOXK2Q01167 660 aa10.47□□□□□ -0.73
SFXN1-202ENST00000421887 RELBQ01201 579 aa10.47□□□□□ -0.73
SFXN1-202ENST00000421887 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
SFXN1-202ENST00000421887 LIMD1Q9UGP4 676 aa10.47□□□□□ -0.73
SFXN1-202ENST00000421887 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
SFXN1-202ENST00000421887 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
SFXN1-202ENST00000421887 MAP3K10Q02779 954 aa10.45□□□□□ -0.74
SFXN1-202ENST00000421887 POLMQ9NP87 494 aaPredicted RBP10.45□□□□□ -0.74
SFXN1-202ENST00000421887 LYPD4Q6UWN0 246 aa10.44□□□□□ -0.74
SFXN1-202ENST00000421887 KCTD15Q96SI1 283 aaPredicted RBP10.44□□□□□ -0.74
SFXN1-202ENST00000421887 LILRB3O75022 631 aa10.43□□□□□ -0.74
SFXN1-202ENST00000421887 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
SFXN1-202ENST00000421887 ZC3H15Q8WU90 426 aaKnown RBP10.43□□□□□ -0.74
SFXN1-202ENST00000421887 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
SFXN1-202ENST00000421887 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
SFXN1-202ENST00000421887 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
SFXN1-202ENST00000421887 SLC10A4Q96EP9 437 aa10.42□□□□□ -0.74
SFXN1-202ENST00000421887 ARHGAP9Q9BRR9 750 aa10.42□□□□□ -0.74
SFXN1-202ENST00000421887 ZNF395Q9H8N7 513 aaPredicted RBP10.42□□□□□ -0.74
SFXN1-202ENST00000421887 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
SFXN1-202ENST00000421887 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
SFXN1-202ENST00000421887 MYO15BQ96JP2 1530 aa10.4□□□□□ -0.74
SFXN1-202ENST00000421887 TRIM66O15016 1216 aa10.4□□□□□ -0.74
SFXN1-202ENST00000421887 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
SFXN1-202ENST00000421887 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
SFXN1-202ENST00000421887 SRSF11Q05519 484 aaKnown RBP10.39□□□□□ -0.75
SFXN1-202ENST00000421887 RNF217Q8TC41 542 aa10.39□□□□□ -0.75
SFXN1-202ENST00000421887 CELA2BP08218 269 aaPredicted RBP10.38□□□□□ -0.75
SFXN1-202ENST00000421887 ENAMQ9NRM1 1142 aa10.38□□□□□ -0.75
SFXN1-202ENST00000421887 CDV3Q9UKY7 258 aaKnown RBP10.38□□□□□ -0.75
SFXN1-202ENST00000421887 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
SFXN1-202ENST00000421887 MSTNO14793 375 aa10.36□□□□□ -0.75
SFXN1-202ENST00000421887 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
SFXN1-202ENST00000421887 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
SFXN1-202ENST00000421887 XP32Q5T750 250 aa10.36□□□□□ -0.75
SFXN1-202ENST00000421887 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
SFXN1-202ENST00000421887 RAB15P59190 212 aa10.35□□□□□ -0.75
SFXN1-202ENST00000421887 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
SFXN1-202ENST00000421887 PLA2G4EQ3MJ16 856 aa10.35□□□□□ -0.75
SFXN1-202ENST00000421887 CNTNAP5Q8WYK1 1306 aa10.34□□□□□ -0.75
SFXN1-202ENST00000421887 GAS6Q14393 721 aa10.34□□□□□ -0.75
SFXN1-202ENST00000421887 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
SFXN1-202ENST00000421887 CUEDC1Q9NWM3 386 aaPredicted RBP10.34□□□□□ -0.75
SFXN1-202ENST00000421887 FKBPLQ9UIM3 349 aa10.34□□□□□ -0.75
SFXN1-202ENST00000421887 PHF20L1A8MW92 1017 aa10.32□□□□□ -0.76
SFXN1-202ENST00000421887 ADAM23O75077 832 aa10.32□□□□□ -0.76
SFXN1-202ENST00000421887 CLK2P49760 499 aaKnown RBP10.32□□□□□ -0.76
SFXN1-202ENST00000421887 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
SFXN1-202ENST00000421887 AK7Q96M32 723 aa10.32□□□□□ -0.76
SFXN1-202ENST00000421887 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
SFXN1-202ENST00000421887 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
SFXN1-202ENST00000421887 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
SFXN1-202ENST00000421887 SPOCK3Q9BQ16 436 aa10.31□□□□□ -0.76
SFXN1-202ENST00000421887 POLR3EQ9NVU0 708 aa10.31□□□□□ -0.76
SFXN1-202ENST00000421887 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
SFXN1-202ENST00000421887 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
SFXN1-202ENST00000421887 GPR25O00155 361 aa10.29□□□□□ -0.76
SFXN1-202ENST00000421887 ADH1AP07327 375 aa10.29□□□□□ -0.76
SFXN1-202ENST00000421887 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
SFXN1-202ENST00000421887 PODNQ7Z5L7 613 aa10.29□□□□□ -0.76
SFXN1-202ENST00000421887 BEND7Q8N7W2 519 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-202ENST00000421887 GALNT6Q8NCL4 622 aa10.29□□□□□ -0.76
SFXN1-202ENST00000421887 RHOQP17081 205 aa10.28□□□□□ -0.76
SFXN1-202ENST00000421887 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
SFXN1-202ENST00000421887 PTGIRP43119 386 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms