RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 MYT1Q01538 1121 aa20.72■□□□□ 0.91
LINC01840-201ENST00000421870 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
LINC01840-201ENST00000421870 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
LINC01840-201ENST00000421870 CRB1P82279 1406 aa20.71■□□□□ 0.91
LINC01840-201ENST00000421870 SOX12O15370 315 aa20.71■□□□□ 0.91
LINC01840-201ENST00000421870 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
LINC01840-201ENST00000421870 OVOS2A0A0J9YW53 1432 aa20.7■□□□□ 0.9
LINC01840-201ENST00000421870 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
LINC01840-201ENST00000421870 OVOS2Q6IE36 1432 aa20.7■□□□□ 0.9
LINC01840-201ENST00000421870 ABCC6O95255 1503 aa20.68■□□□□ 0.9
LINC01840-201ENST00000421870 WDR17Q8IZU2 1322 aa20.68■□□□□ 0.9
LINC01840-201ENST00000421870 LTN1O94822 1766 aa20.67■□□□□ 0.9
LINC01840-201ENST00000421870 FYB1O15117 783 aa20.66■□□□□ 0.9
LINC01840-201ENST00000421870 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
LINC01840-201ENST00000421870 TOM1L2Q6ZVM7 507 aa20.66■□□□□ 0.9
LINC01840-201ENST00000421870 MYOM1P52179 1685 aa20.65■□□□□ 0.9
LINC01840-201ENST00000421870 COG3Q96JB2 828 aa20.65■□□□□ 0.9
LINC01840-201ENST00000421870 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.9
LINC01840-201ENST00000421870 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
LINC01840-201ENST00000421870 CARD10Q9BWT7 1032 aa20.64■□□□□ 0.89
LINC01840-201ENST00000421870 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
LINC01840-201ENST00000421870 PDE3BQ13370 1112 aa20.62■□□□□ 0.89
LINC01840-201ENST00000421870 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
LINC01840-201ENST00000421870 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
LINC01840-201ENST00000421870 IP6K1Q92551 441 aa20.61■□□□□ 0.89
LINC01840-201ENST00000421870 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
LINC01840-201ENST00000421870 ERBB3P21860 1342 aa20.59■□□□□ 0.89
LINC01840-201ENST00000421870 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
LINC01840-201ENST00000421870 DEFB132Q7Z7B7 95 aa20.59■□□□□ 0.89
LINC01840-201ENST00000421870 GGNBP2Q9H3C7 697 aa20.59■□□□□ 0.89
LINC01840-201ENST00000421870 WNK3Q9BYP7 1800 aa20.59■□□□□ 0.89
LINC01840-201ENST00000421870 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
LINC01840-201ENST00000421870 FBLN1P23142 703 aa20.58■□□□□ 0.89
LINC01840-201ENST00000421870 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
LINC01840-201ENST00000421870 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
LINC01840-201ENST00000421870 ANKRD24Q8TF21 1146 aa20.57■□□□□ 0.88
LINC01840-201ENST00000421870 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
LINC01840-201ENST00000421870 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
LINC01840-201ENST00000421870 DDB1Q16531 1140 aa20.56■□□□□ 0.88
LINC01840-201ENST00000421870 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
LINC01840-201ENST00000421870 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
LINC01840-201ENST00000421870 LRRC37A3O60309 1634 aa20.54■□□□□ 0.88
LINC01840-201ENST00000421870 TNS1Q9HBL0 1735 aaKnown RBP20.54■□□□□ 0.88
LINC01840-201ENST00000421870 BAG6P46379 1132 aa20.54■□□□□ 0.88
LINC01840-201ENST00000421870 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
LINC01840-201ENST00000421870 TRIM37O94972 964 aa20.53■□□□□ 0.88
LINC01840-201ENST00000421870 HOXC9P31274 260 aa20.53■□□□□ 0.88
LINC01840-201ENST00000421870 NLRP2Q9NX02 1062 aa20.53■□□□□ 0.88
LINC01840-201ENST00000421870 AMPHP49418 695 aa20.52■□□□□ 0.88
LINC01840-201ENST00000421870 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
LINC01840-201ENST00000421870 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
LINC01840-201ENST00000421870 EXOC5O00471 708 aa20.51■□□□□ 0.87
LINC01840-201ENST00000421870 RRS1Q15050 365 aaKnown RBP20.51■□□□□ 0.87
LINC01840-201ENST00000421870 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
LINC01840-201ENST00000421870 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
LINC01840-201ENST00000421870 FAM208AQ9UK61 1670 aaKnown RBP20.5■□□□□ 0.87
LINC01840-201ENST00000421870 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
LINC01840-201ENST00000421870 PANK3Q9H999 370 aa20.49■□□□□ 0.87
LINC01840-201ENST00000421870 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
LINC01840-201ENST00000421870 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
LINC01840-201ENST00000421870 KIF24Q5T7B8 1368 aa20.48■□□□□ 0.87
LINC01840-201ENST00000421870 BCL9O00512 1426 aa20.48■□□□□ 0.87
LINC01840-201ENST00000421870 IL2RBP14784 551 aa20.48■□□□□ 0.87
LINC01840-201ENST00000421870 RGPD2P0DJD1 1756 aa20.47■□□□□ 0.87
LINC01840-201ENST00000421870 APBA3O96018 575 aa20.47■□□□□ 0.87
LINC01840-201ENST00000421870 LTV1Q96GA3 475 aaPredicted RBP20.47■□□□□ 0.87
LINC01840-201ENST00000421870 CAMKK2Q96RR4 588 aa20.47■□□□□ 0.87
LINC01840-201ENST00000421870 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
LINC01840-201ENST00000421870 INSRP06213 1382 aa20.45■□□□□ 0.86
LINC01840-201ENST00000421870 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
LINC01840-201ENST00000421870 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
LINC01840-201ENST00000421870 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
LINC01840-201ENST00000421870 TNS2Q63HR2 1409 aa20.44■□□□□ 0.86
LINC01840-201ENST00000421870 KIF7Q2M1P5 1343 aa20.43■□□□□ 0.86
LINC01840-201ENST00000421870 PARD3Q8TEW0 1356 aa20.43■□□□□ 0.86
LINC01840-201ENST00000421870 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
LINC01840-201ENST00000421870 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
LINC01840-201ENST00000421870 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
LINC01840-201ENST00000421870 FLT4P35916 1363 aa20.42■□□□□ 0.86
LINC01840-201ENST00000421870 PLSCR1O15162 318 aa20.41■□□□□ 0.86
LINC01840-201ENST00000421870 EMILIN1Q9Y6C2 1016 aa20.41■□□□□ 0.86
LINC01840-201ENST00000421870 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
LINC01840-201ENST00000421870 PTF1AQ7RTS3 328 aa20.39■□□□□ 0.85
LINC01840-201ENST00000421870 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
LINC01840-201ENST00000421870 SMG6Q86US8 1419 aaKnown RBP20.37■□□□□ 0.85
LINC01840-201ENST00000421870 NSD2O96028 1365 aa20.37■□□□□ 0.85
LINC01840-201ENST00000421870 RREB1Q92766 1687 aa20.37■□□□□ 0.85
LINC01840-201ENST00000421870 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
LINC01840-201ENST00000421870 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
LINC01840-201ENST00000421870 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
LINC01840-201ENST00000421870 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
LINC01840-201ENST00000421870 PER1O15534 1290 aaPredicted RBP20.35■□□□□ 0.85
LINC01840-201ENST00000421870 KCNQ2O43526 872 aa20.34■□□□□ 0.85
LINC01840-201ENST00000421870 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
LINC01840-201ENST00000421870 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
LINC01840-201ENST00000421870 MEGF6O75095 1541 aa20.33■□□□□ 0.85
LINC01840-201ENST00000421870 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
LINC01840-201ENST00000421870 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.85
LINC01840-201ENST00000421870 DDX54Q8TDD1 881 aaKnown RBP20.33■□□□□ 0.85
LINC01840-201ENST00000421870 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms