RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
PMS1-208ENST00000421722 PROM2Q8N271 834 aa9.81□□□□□ -0.84
PMS1-208ENST00000421722 ABTB2Q8N961 1025 aa9.81□□□□□ -0.84
PMS1-208ENST00000421722 CDK19Q9BWU1 502 aa9.81□□□□□ -0.84
PMS1-208ENST00000421722 GCP02774 474 aa9.81□□□□□ -0.84
PMS1-208ENST00000421722 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
PMS1-208ENST00000421722 AKAP12Q02952 1782 aa9.81□□□□□ -0.84
PMS1-208ENST00000421722 TXNRD1Q16881 649 aa9.8□□□□□ -0.84
PMS1-208ENST00000421722 GIGYF1O75420 1035 aaPredicted RBP9.8□□□□□ -0.84
PMS1-208ENST00000421722 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
PMS1-208ENST00000421722 COL18A1P39060 1754 aa9.79□□□□□ -0.84
PMS1-208ENST00000421722 ARXQ96QS3 562 aa9.79□□□□□ -0.84
PMS1-208ENST00000421722 COL24A1Q17RW2 1714 aa9.79□□□□□ -0.84
PMS1-208ENST00000421722 MARCH10Q8NA82 808 aaPredicted RBP9.79□□□□□ -0.84
PMS1-208ENST00000421722 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
PMS1-208ENST00000421722 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
PMS1-208ENST00000421722 WDR17Q8IZU2 1322 aa9.78□□□□□ -0.84
PMS1-208ENST00000421722 QSER1Q2KHR3 1735 aa9.78□□□□□ -0.84
PMS1-208ENST00000421722 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
PMS1-208ENST00000421722 ABCC6O95255 1503 aa9.77□□□□□ -0.84
PMS1-208ENST00000421722 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.84
PMS1-208ENST00000421722 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.84
PMS1-208ENST00000421722 TOM1L2Q6ZVM7 507 aa9.77□□□□□ -0.85
PMS1-208ENST00000421722 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
PMS1-208ENST00000421722 CCDC7Q96M83 1385 aa9.76□□□□□ -0.85
PMS1-208ENST00000421722 GPR162Q16538 588 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 PTF1AQ7RTS3 328 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 TNS2Q63HR2 1409 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 SHANK3Q9BYB0 1731 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 EXOC5O00471 708 aa9.75□□□□□ -0.85
PMS1-208ENST00000421722 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
PMS1-208ENST00000421722 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
PMS1-208ENST00000421722 USP6P35125 1406 aa9.74□□□□□ -0.85
PMS1-208ENST00000421722 CPSF1Q10570 1443 aaKnown RBP9.74□□□□□ -0.85
PMS1-208ENST00000421722 QRICH2Q9H0J4 1663 aa9.74□□□□□ -0.85
PMS1-208ENST00000421722 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
PMS1-208ENST00000421722 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
PMS1-208ENST00000421722 GRIN3BO60391 1043 aa9.73□□□□□ -0.85
PMS1-208ENST00000421722 POLD1P28340 1107 aa9.73□□□□□ -0.85
PMS1-208ENST00000421722 NLRP6P59044 892 aa9.73□□□□□ -0.85
PMS1-208ENST00000421722 ARHGEF25Q86VW2 580 aa9.72□□□□□ -0.85
PMS1-208ENST00000421722 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
PMS1-208ENST00000421722 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
PMS1-208ENST00000421722 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
PMS1-208ENST00000421722 ZBTB7CA1YPR0 619 aa9.7□□□□□ -0.86
PMS1-208ENST00000421722 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
PMS1-208ENST00000421722 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
PMS1-208ENST00000421722 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
PMS1-208ENST00000421722 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
PMS1-208ENST00000421722 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
PMS1-208ENST00000421722 BTAF1O14981 1849 aa9.69□□□□□ -0.86
PMS1-208ENST00000421722 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
PMS1-208ENST00000421722 NFAT5O94916 1531 aa9.69□□□□□ -0.86
PMS1-208ENST00000421722 ZNF827Q17R98 1081 aa9.68□□□□□ -0.86
PMS1-208ENST00000421722 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
PMS1-208ENST00000421722 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
PMS1-208ENST00000421722 USP54Q70EL1 1684 aa9.68□□□□□ -0.86
PMS1-208ENST00000421722 HSPA6P17066 643 aa9.67□□□□□ -0.86
PMS1-208ENST00000421722 TTC21BQ7Z4L5 1316 aa9.67□□□□□ -0.86
PMS1-208ENST00000421722 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
PMS1-208ENST00000421722 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
PMS1-208ENST00000421722 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
PMS1-208ENST00000421722 RAB3GAP2Q9H2M9 1393 aa9.66□□□□□ -0.86
PMS1-208ENST00000421722 PNPLA7Q6ZV29 1317 aa9.66□□□□□ -0.86
PMS1-208ENST00000421722 IL2RBP14784 551 aa9.66□□□□□ -0.86
PMS1-208ENST00000421722 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
PMS1-208ENST00000421722 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
PMS1-208ENST00000421722 ACSBG1Q96GR2 724 aa9.65□□□□□ -0.86
PMS1-208ENST00000421722 LRRC4BQ9NT99 713 aa9.65□□□□□ -0.86
PMS1-208ENST00000421722 ADCY9O60503 1353 aa9.65□□□□□ -0.86
PMS1-208ENST00000421722 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
PMS1-208ENST00000421722 EVC2Q86UK5 1308 aa9.64□□□□□ -0.87
PMS1-208ENST00000421722 ADRA2BP18089 450 aa9.64□□□□□ -0.87
PMS1-208ENST00000421722 YBX3P16989 372 aaKnown RBP eCLIP9.63□□□□□ -0.87
PMS1-208ENST00000421722 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
PMS1-208ENST00000421722 CD2APQ9Y5K6 639 aa9.63□□□□□ -0.87
PMS1-208ENST00000421722 LY75O60449 1722 aa9.63□□□□□ -0.87
PMS1-208ENST00000421722 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
PMS1-208ENST00000421722 GPBP1L1Q9HC44 474 aaPredicted RBP9.63□□□□□ -0.87
PMS1-208ENST00000421722 ERBB3P21860 1342 aa9.62□□□□□ -0.87
PMS1-208ENST00000421722 FAM208AQ9UK61 1670 aaKnown RBP9.62□□□□□ -0.87
PMS1-208ENST00000421722 TFCP2L1Q9NZI6 479 aa9.62□□□□□ -0.87
PMS1-208ENST00000421722 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 MON2Q7Z3U7 1717 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 ANKRD36BQ8N2N9 1353 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 APLP1P51693 650 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
PMS1-208ENST00000421722 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
PMS1-208ENST00000421722 ANKRD24Q8TF21 1146 aa9.59□□□□□ -0.87
PMS1-208ENST00000421722 CICQ96RK0 1608 aaPredicted RBP9.59□□□□□ -0.87
PMS1-208ENST00000421722 NSD2O96028 1365 aa9.58□□□□□ -0.88
PMS1-208ENST00000421722 LTN1O94822 1766 aa9.58□□□□□ -0.88
PMS1-208ENST00000421722 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
PMS1-208ENST00000421722 CCNL1Q9UK58 526 aaPredicted RBP9.57□□□□□ -0.88
PMS1-208ENST00000421722 DOT1LQ8TEK3 1739 aa9.56□□□□□ -0.88
PMS1-208ENST00000421722 KIF3CO14782 793 aa9.56□□□□□ -0.88
PMS1-208ENST00000421722 SOX12O15370 315 aa9.56□□□□□ -0.88
PMS1-208ENST00000421722 IP6K1Q92551 441 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms