RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 FLT4P35916 1363 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
CAST-208ENST00000421689 HOXC9P31274 260 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 MTHFSP49914 203 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 NGLY1Q96IV0 654 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
CAST-208ENST00000421689 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
CAST-208ENST00000421689 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
CAST-208ENST00000421689 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
CAST-208ENST00000421689 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
CAST-208ENST00000421689 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
CAST-208ENST00000421689 SLIT2O94813 1529 aa15.9■□□□□ 0.14
CAST-208ENST00000421689 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
CAST-208ENST00000421689 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
CAST-208ENST00000421689 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
CAST-208ENST00000421689 INSRP06213 1382 aa15.89■□□□□ 0.13
CAST-208ENST00000421689 HSP90AB2PQ58FF8 381 aa15.89■□□□□ 0.13
CAST-208ENST00000421689 CFAP53Q96M91 514 aa15.89■□□□□ 0.13
CAST-208ENST00000421689 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
CAST-208ENST00000421689 EVA1CP58658 441 aa15.88■□□□□ 0.13
CAST-208ENST00000421689 AFF2P51816 1311 aa15.88■□□□□ 0.13
CAST-208ENST00000421689 COL5A2P05997 1499 aaPredicted RBP15.87■□□□□ 0.13
CAST-208ENST00000421689 USP21Q9UK80 565 aa15.87■□□□□ 0.13
CAST-208ENST00000421689 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
CAST-208ENST00000421689 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
CAST-208ENST00000421689 UNC5CLQ8IV45 518 aa15.86■□□□□ 0.13
CAST-208ENST00000421689 ANKRD24Q8TF21 1146 aa15.86■□□□□ 0.13
CAST-208ENST00000421689 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
CAST-208ENST00000421689 MSH5O43196 834 aa15.85■□□□□ 0.13
CAST-208ENST00000421689 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
CAST-208ENST00000421689 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
CAST-208ENST00000421689 ERBB3P21860 1342 aa15.85■□□□□ 0.13
CAST-208ENST00000421689 DIAPH1O60610 1272 aaKnown RBP15.84■□□□□ 0.13
CAST-208ENST00000421689 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
CAST-208ENST00000421689 EIF4A2Q14240 407 aaKnown RBP15.84■□□□□ 0.13
CAST-208ENST00000421689 WDR17Q8IZU2 1322 aa15.84■□□□□ 0.13
CAST-208ENST00000421689 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
CAST-208ENST00000421689 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
CAST-208ENST00000421689 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
CAST-208ENST00000421689 IL13P35225 146 aa15.82■□□□□ 0.12
CAST-208ENST00000421689 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
CAST-208ENST00000421689 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
CAST-208ENST00000421689 CRB1P82279 1406 aa15.81■□□□□ 0.12
CAST-208ENST00000421689 VPS72Q15906 364 aa15.81■□□□□ 0.12
CAST-208ENST00000421689 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
CAST-208ENST00000421689 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
CAST-208ENST00000421689 MIER1Q8N108 512 aa15.8■□□□□ 0.12
CAST-208ENST00000421689 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
CAST-208ENST00000421689 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
CAST-208ENST00000421689 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
CAST-208ENST00000421689 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
CAST-208ENST00000421689 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
CAST-208ENST00000421689 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
CAST-208ENST00000421689 RGPD1P0DJD0 1748 aa15.79■□□□□ 0.12
CAST-208ENST00000421689 ATRNO75882 1429 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 SPATA31A5Q5VU36 1347 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 SPATA31A7Q8IWB4 1347 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 EYA1Q99502 592 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
CAST-208ENST00000421689 SPATA31A1Q5TZJ5 1347 aa15.77■□□□□ 0.12
CAST-208ENST00000421689 IGSF1Q8N6C5 1336 aa15.77■□□□□ 0.12
CAST-208ENST00000421689 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
CAST-208ENST00000421689 CCDC184Q52MB2 194 aa15.77■□□□□ 0.12
CAST-208ENST00000421689 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
CAST-208ENST00000421689 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
CAST-208ENST00000421689 RGS17Q9UGC6 210 aaPredicted RBP15.76■□□□□ 0.11
CAST-208ENST00000421689 THRAP3Q9Y2W1 955 aaKnown RBP15.76■□□□□ 0.11
CAST-208ENST00000421689 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
CAST-208ENST00000421689 TCP11L2Q8N4U5 519 aa15.75■□□□□ 0.11
CAST-208ENST00000421689 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
CAST-208ENST00000421689 U2AF1L5P0DN76 240 aaPredicted RBP15.74■□□□□ 0.11
CAST-208ENST00000421689 U2AF1Q01081 240 aaKnown RBP eCLIP15.74■□□□□ 0.11
CAST-208ENST00000421689 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
CAST-208ENST00000421689 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
CAST-208ENST00000421689 GLI3P10071 1580 aa15.74■□□□□ 0.11
CAST-208ENST00000421689 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
CAST-208ENST00000421689 BARGINQ6ZT62 677 aa15.73■□□□□ 0.11
CAST-208ENST00000421689 KDRP35968 1356 aa15.73■□□□□ 0.11
CAST-208ENST00000421689 RBM6P78332 1123 aaKnown RBP15.72■□□□□ 0.11
CAST-208ENST00000421689 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
CAST-208ENST00000421689 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
CAST-208ENST00000421689 FCHSD2O94868 740 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 HMOX1P09601 288 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 IL2RBP14784 551 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 POTEAQ6S8J7 498 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 AEBP1Q8IUX7 1158 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 RAPGEF4Q8WZA2 1011 aa15.71■□□□□ 0.11
CAST-208ENST00000421689 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.1
CAST-208ENST00000421689 RXRBP28702 533 aa15.7■□□□□ 0.1
CAST-208ENST00000421689 FAM98CQ17RN3 349 aaKnown RBP15.7■□□□□ 0.1
CAST-208ENST00000421689 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
CAST-208ENST00000421689 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
CAST-208ENST00000421689 TATP17735 454 aaPredicted RBP15.69■□□□□ 0.1
CAST-208ENST00000421689 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
CAST-208ENST00000421689 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
CAST-208ENST00000421689 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms