RNA–Protein interactions for RNA: ENST00000421664.1

EFEMP1-203, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-203ENST00000421664 AMER1Q5JTC6 1135 aaPredicted RBP22.56■■□□□ 1.2
EFEMP1-203ENST00000421664 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
EFEMP1-203ENST00000421664 RBM6P78332 1123 aaKnown RBP22.55■■□□□ 1.2
EFEMP1-203ENST00000421664 RGPD5Q99666 1765 aa22.54■■□□□ 1.2
EFEMP1-203ENST00000421664 AXIN2Q9Y2T1 843 aa22.54■■□□□ 1.2
EFEMP1-203ENST00000421664 MAP3K19Q56UN5 1328 aa22.54■■□□□ 1.2
EFEMP1-203ENST00000421664 FBLN1P23142 703 aa22.53■■□□□ 1.2
EFEMP1-203ENST00000421664 RXRBP28702 533 aa22.53■■□□□ 1.2
EFEMP1-203ENST00000421664 GJD4Q96KN9 370 aaPredicted RBP22.53■■□□□ 1.2
EFEMP1-203ENST00000421664 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
EFEMP1-203ENST00000421664 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
EFEMP1-203ENST00000421664 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
EFEMP1-203ENST00000421664 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
EFEMP1-203ENST00000421664 STRN4Q9NRL3 753 aa22.51■■□□□ 1.19
EFEMP1-203ENST00000421664 SPATA31A5Q5VU36 1347 aa22.51■■□□□ 1.19
EFEMP1-203ENST00000421664 SPATA31A7Q8IWB4 1347 aa22.51■■□□□ 1.19
EFEMP1-203ENST00000421664 RGS12O14924 1447 aa22.5■■□□□ 1.19
EFEMP1-203ENST00000421664 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
EFEMP1-203ENST00000421664 RRS1Q15050 365 aaKnown RBP22.49■■□□□ 1.19
EFEMP1-203ENST00000421664 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
EFEMP1-203ENST00000421664 IP6K1Q92551 441 aa22.49■■□□□ 1.19
EFEMP1-203ENST00000421664 CRB1P82279 1406 aa22.48■■□□□ 1.19
EFEMP1-203ENST00000421664 EVA1CP58658 441 aa22.48■■□□□ 1.19
EFEMP1-203ENST00000421664 SPATA31A1Q5TZJ5 1347 aa22.48■■□□□ 1.19
EFEMP1-203ENST00000421664 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
EFEMP1-203ENST00000421664 HOXC9P31274 260 aa22.47■■□□□ 1.19
EFEMP1-203ENST00000421664 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
EFEMP1-203ENST00000421664 ERBB3P21860 1342 aa22.47■■□□□ 1.19
EFEMP1-203ENST00000421664 SMG6Q86US8 1419 aaKnown RBP22.47■■□□□ 1.19
EFEMP1-203ENST00000421664 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
EFEMP1-203ENST00000421664 FLT4P35916 1363 aa22.46■■□□□ 1.19
EFEMP1-203ENST00000421664 FAM208AQ9UK61 1670 aaKnown RBP22.46■■□□□ 1.19
EFEMP1-203ENST00000421664 THSD7AQ9UPZ6 1657 aa22.46■■□□□ 1.19
EFEMP1-203ENST00000421664 AMPHP49418 695 aa22.45■■□□□ 1.18
EFEMP1-203ENST00000421664 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
EFEMP1-203ENST00000421664 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
EFEMP1-203ENST00000421664 INSRP06213 1382 aa22.43■■□□□ 1.18
EFEMP1-203ENST00000421664 ONECUT3O60422 494 aaPredicted RBP22.43■■□□□ 1.18
EFEMP1-203ENST00000421664 TNNT2P45379 298 aaPredicted RBP22.43■■□□□ 1.18
EFEMP1-203ENST00000421664 CC2D1BQ5T0F9 858 aaKnown RBP22.43■■□□□ 1.18
EFEMP1-203ENST00000421664 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
EFEMP1-203ENST00000421664 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
EFEMP1-203ENST00000421664 WNK3Q9BYP7 1800 aa22.41■■□□□ 1.18
EFEMP1-203ENST00000421664 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 THRAP3Q9Y2W1 955 aaKnown RBP22.4■■□□□ 1.18
EFEMP1-203ENST00000421664 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
EFEMP1-203ENST00000421664 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
EFEMP1-203ENST00000421664 HSP90AB2PQ58FF8 381 aa22.39■■□□□ 1.17
EFEMP1-203ENST00000421664 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
EFEMP1-203ENST00000421664 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
EFEMP1-203ENST00000421664 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
EFEMP1-203ENST00000421664 PPM1GO15355 546 aaPredicted RBP22.36■■□□□ 1.17
EFEMP1-203ENST00000421664 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
EFEMP1-203ENST00000421664 DISP2A7MBM2 1401 aa22.36■■□□□ 1.17
EFEMP1-203ENST00000421664 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
EFEMP1-203ENST00000421664 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
EFEMP1-203ENST00000421664 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
EFEMP1-203ENST00000421664 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
EFEMP1-203ENST00000421664 LRRC37A3O60309 1634 aa22.33■■□□□ 1.17
EFEMP1-203ENST00000421664 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
EFEMP1-203ENST00000421664 PARD3Q8TEW0 1356 aa22.32■■□□□ 1.16
EFEMP1-203ENST00000421664 NCAPD2Q15021 1401 aa22.31■■□□□ 1.16
EFEMP1-203ENST00000421664 A0A0G2JS52 829 aa22.3■■□□□ 1.16
EFEMP1-203ENST00000421664 MYT1Q01538 1121 aa22.3■■□□□ 1.16
EFEMP1-203ENST00000421664 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
EFEMP1-203ENST00000421664 MTHFSP49914 203 aa22.29■■□□□ 1.16
EFEMP1-203ENST00000421664 NBPF6Q5VWK0 638 aa22.29■■□□□ 1.16
EFEMP1-203ENST00000421664 NBPF4Q96M43 638 aa22.29■■□□□ 1.16
EFEMP1-203ENST00000421664 EIF4A2Q14240 407 aaKnown RBP22.28■■□□□ 1.16
EFEMP1-203ENST00000421664 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
EFEMP1-203ENST00000421664 RGPD1P0DJD0 1748 aa22.26■■□□□ 1.15
EFEMP1-203ENST00000421664 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
EFEMP1-203ENST00000421664 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
EFEMP1-203ENST00000421664 IL2RBP14784 551 aa22.25■■□□□ 1.15
EFEMP1-203ENST00000421664 PPP2R1AP30153 589 aa22.25■■□□□ 1.15
EFEMP1-203ENST00000421664 MEGF6O75095 1541 aa22.25■■□□□ 1.15
EFEMP1-203ENST00000421664 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
EFEMP1-203ENST00000421664 EYA1Q99502 592 aa22.24■■□□□ 1.15
EFEMP1-203ENST00000421664 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
EFEMP1-203ENST00000421664 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
EFEMP1-203ENST00000421664 DDB1Q16531 1140 aa22.22■■□□□ 1.15
EFEMP1-203ENST00000421664 IL13P35225 146 aa22.21■■□□□ 1.15
EFEMP1-203ENST00000421664 EP400Q96L91 3159 aa22.21■■□□□ 1.15
EFEMP1-203ENST00000421664 RALBP1Q15311 655 aa22.2■■□□□ 1.14
EFEMP1-203ENST00000421664 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
EFEMP1-203ENST00000421664 SHANK3Q9BYB0 1731 aa22.19■■□□□ 1.14
EFEMP1-203ENST00000421664 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
EFEMP1-203ENST00000421664 PLEKHG2Q9H7P9 1386 aa22.17■■□□□ 1.14
EFEMP1-203ENST00000421664 EXOC5O00471 708 aa22.17■■□□□ 1.14
EFEMP1-203ENST00000421664 DIAPH1O60610 1272 aaKnown RBP22.17■■□□□ 1.14
EFEMP1-203ENST00000421664 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
EFEMP1-203ENST00000421664 KDRP35968 1356 aa22.16■■□□□ 1.14
EFEMP1-203ENST00000421664 FAM182BQ5T319 152 aa22.16■■□□□ 1.14
EFEMP1-203ENST00000421664 BCL9O00512 1426 aa22.15■■□□□ 1.14
EFEMP1-203ENST00000421664 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
EFEMP1-203ENST00000421664 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms