RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TOM1L2Q6ZVM7 507 aa26.83■■□□□ 1.89
VARS2-202ENST00000421263 PARD3Q8TEW0 1356 aa26.83■■□□□ 1.88
VARS2-202ENST00000421263 TRIM26Q12899 539 aaPredicted RBP26.82■■□□□ 1.88
VARS2-202ENST00000421263 NFAT5O94916 1531 aa26.81■■□□□ 1.88
VARS2-202ENST00000421263 LRP5O75197 1615 aa26.8■■□□□ 1.88
VARS2-202ENST00000421263 SLC12A5Q9H2X9 1139 aa26.8■■□□□ 1.88
VARS2-202ENST00000421263 SOX12O15370 315 aa26.78■■□□□ 1.88
VARS2-202ENST00000421263 R3HDM1Q15032 1099 aaKnown RBP26.78■■□□□ 1.88
VARS2-202ENST00000421263 DDB1Q16531 1140 aa26.78■■□□□ 1.88
VARS2-202ENST00000421263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.78■■□□□ 1.88
VARS2-202ENST00000421263 CDCA7Q9BWT1 371 aaPredicted RBP26.78■■□□□ 1.88
VARS2-202ENST00000421263 CARD10Q9BWT7 1032 aa26.78■■□□□ 1.88
VARS2-202ENST00000421263 RGPD5Q99666 1765 aa26.78■■□□□ 1.88
VARS2-202ENST00000421263 PEAK1Q9H792 1746 aa26.77■■□□□ 1.88
VARS2-202ENST00000421263 HDGFL2Q7Z4V5 671 aaPredicted RBP26.77■■□□□ 1.88
VARS2-202ENST00000421263 TMC1Q8TDI8 760 aa26.77■■□□□ 1.88
VARS2-202ENST00000421263 TESK2Q96S53 571 aa26.77■■□□□ 1.88
VARS2-202ENST00000421263 USP54Q70EL1 1684 aa26.76■■□□□ 1.87
VARS2-202ENST00000421263 NME9Q86XW9 330 aa26.76■■□□□ 1.87
VARS2-202ENST00000421263 ABCC6O95255 1503 aa26.75■■□□□ 1.87
VARS2-202ENST00000421263 LRRC37A3O60309 1634 aa26.75■■□□□ 1.87
VARS2-202ENST00000421263 OVOS2A0A0G2JMS6 1433 aa26.74■■□□□ 1.87
VARS2-202ENST00000421263 OVOS2A0A0J9YW53 1432 aa26.74■■□□□ 1.87
VARS2-202ENST00000421263 OVOS2Q6IE36 1432 aa26.74■■□□□ 1.87
VARS2-202ENST00000421263 RREB1Q92766 1687 aa26.73■■□□□ 1.87
VARS2-202ENST00000421263 ST20-MTHFSA0A0A6YYL1 179 aa26.73■■□□□ 1.87
VARS2-202ENST00000421263 TERF2IPQ9NYB0 399 aa26.73■■□□□ 1.87
VARS2-202ENST00000421263 EDC4Q6P2E9 1401 aaKnown RBP26.73■■□□□ 1.87
VARS2-202ENST00000421263 WNK3Q9BYP7 1800 aa26.72■■□□□ 1.87
VARS2-202ENST00000421263 CSB-PGBD3P0DP91 1061 aa26.72■■□□□ 1.87
VARS2-202ENST00000421263 SLC24A1O60721 1099 aa26.71■■□□□ 1.87
VARS2-202ENST00000421263 MARCH10Q8NA82 808 aaPredicted RBP26.71■■□□□ 1.87
VARS2-202ENST00000421263 BCL9O00512 1426 aa26.71■■□□□ 1.87
VARS2-202ENST00000421263 A0A1W2PP64 1363 aa26.71■■□□□ 1.87
VARS2-202ENST00000421263 SBF2Q86WG5 1849 aa26.7■■□□□ 1.87
VARS2-202ENST00000421263 PLSCR1O15162 318 aa26.7■■□□□ 1.86
VARS2-202ENST00000421263 CCDC7Q96M83 1385 aa26.7■■□□□ 1.86
VARS2-202ENST00000421263 NUP188Q5SRE5 1749 aa26.68■■□□□ 1.86
VARS2-202ENST00000421263 EXOC5O00471 708 aa26.67■■□□□ 1.86
VARS2-202ENST00000421263 BCL11BQ9C0K0 894 aaPredicted RBP26.67■■□□□ 1.86
VARS2-202ENST00000421263 NBPF14Q5TI25 921 aa26.66■■□□□ 1.86
VARS2-202ENST00000421263 NINLQ9Y2I6 1382 aa26.66■■□□□ 1.86
VARS2-202ENST00000421263 ERBB3P21860 1342 aa26.65■■□□□ 1.86
VARS2-202ENST00000421263 PTF1AQ7RTS3 328 aa26.64■■□□□ 1.86
VARS2-202ENST00000421263 LTN1O94822 1766 aa26.62■■□□□ 1.85
VARS2-202ENST00000421263 RGPD3A6NKT7 1758 aaPredicted RBP26.61■■□□□ 1.85
VARS2-202ENST00000421263 RGPD4Q7Z3J3 1758 aa26.61■■□□□ 1.85
VARS2-202ENST00000421263 ANKRD24Q8TF21 1146 aa26.6■■□□□ 1.85
VARS2-202ENST00000421263 PROM2Q8N271 834 aa26.59■■□□□ 1.85
VARS2-202ENST00000421263 NLRP2Q9NX02 1062 aa26.59■■□□□ 1.85
VARS2-202ENST00000421263 TNS2Q63HR2 1409 aa26.58■■□□□ 1.85
VARS2-202ENST00000421263 IP6K1Q92551 441 aa26.58■■□□□ 1.85
VARS2-202ENST00000421263 IL2RBP14784 551 aa26.56■■□□□ 1.84
VARS2-202ENST00000421263 ANKRD36BQ8N2N9 1353 aa26.56■■□□□ 1.84
VARS2-202ENST00000421263 TMF1P82094 1093 aa26.55■■□□□ 1.84
VARS2-202ENST00000421263 COG3Q96JB2 828 aa26.55■■□□□ 1.84
VARS2-202ENST00000421263 TIMELESSQ9UNS1 1208 aa26.54■■□□□ 1.84
VARS2-202ENST00000421263 USP47Q96K76 1375 aa26.54■■□□□ 1.84
VARS2-202ENST00000421263 KCNQ2O43526 872 aa26.52■■□□□ 1.84
VARS2-202ENST00000421263 MAP3K19Q56UN5 1328 aa26.5■■□□□ 1.83
VARS2-202ENST00000421263 ANO8Q9HCE9 1232 aaPredicted RBP26.5■■□□□ 1.83
VARS2-202ENST00000421263 FYB1O15117 783 aa26.49■■□□□ 1.83
VARS2-202ENST00000421263 FBLN1P23142 703 aa26.49■■□□□ 1.83
VARS2-202ENST00000421263 TXNRD1Q16881 649 aa26.49■■□□□ 1.83
VARS2-202ENST00000421263 HOXC9P31274 260 aa26.48■■□□□ 1.83
VARS2-202ENST00000421263 SPON1Q9HCB6 807 aa26.47■■□□□ 1.83
VARS2-202ENST00000421263 CDCA8Q53HL2 280 aa26.46■■□□□ 1.83
VARS2-202ENST00000421263 CLSPNQ9HAW4 1339 aa26.45■■□□□ 1.83
VARS2-202ENST00000421263 NHSQ6T4R5 1651 aa26.45■■□□□ 1.82
VARS2-202ENST00000421263 LTV1Q96GA3 475 aaPredicted RBP26.45■■□□□ 1.82
VARS2-202ENST00000421263 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
VARS2-202ENST00000421263 ACSBG1Q96GR2 724 aa26.44■■□□□ 1.82
VARS2-202ENST00000421263 AMPHP49418 695 aa26.43■■□□□ 1.82
VARS2-202ENST00000421263 GGNBP2Q9H3C7 697 aa26.43■■□□□ 1.82
VARS2-202ENST00000421263 CASZ1Q86V15 1759 aa26.41■■□□□ 1.82
VARS2-202ENST00000421263 SLC15A2Q16348 729 aa26.4■■□□□ 1.82
VARS2-202ENST00000421263 PDGFDQ9GZP0 370 aaPredicted RBP26.4■■□□□ 1.82
VARS2-202ENST00000421263 RTL1A6NKG5 1358 aa26.4■■□□□ 1.82
VARS2-202ENST00000421263 RRS1Q15050 365 aaKnown RBP26.39■■□□□ 1.82
VARS2-202ENST00000421263 CARD14Q9BXL6 1004 aa26.38■■□□□ 1.81
VARS2-202ENST00000421263 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
VARS2-202ENST00000421263 DDX54Q8TDD1 881 aaKnown RBP26.37■■□□□ 1.81
VARS2-202ENST00000421263 RGPD2P0DJD1 1756 aa26.35■■□□□ 1.81
VARS2-202ENST00000421263 BTAF1O14981 1849 aa26.35■■□□□ 1.81
VARS2-202ENST00000421263 NBPF6Q5VWK0 638 aa26.35■■□□□ 1.81
VARS2-202ENST00000421263 NBPF4Q96M43 638 aa26.35■■□□□ 1.81
VARS2-202ENST00000421263 PCGF6Q9BYE7 350 aa26.35■■□□□ 1.81
VARS2-202ENST00000421263 PPP1R1BQ9UD71 204 aaPredicted RBP26.34■■□□□ 1.81
VARS2-202ENST00000421263 ZCRB1Q8TBF4 217 aaKnown RBP26.33■■□□□ 1.81
VARS2-202ENST00000421263 KAT6BQ8WYB5 2073 aa26.33■■□□□ 1.81
VARS2-202ENST00000421263 KIF24Q5T7B8 1368 aa26.32■■□□□ 1.8
VARS2-202ENST00000421263 MYOM1P52179 1685 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 KIF20BQ96Q89 1820 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 PTGER2P43116 358 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 LRRC4BQ9NT99 713 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 PAPPAQ13219 1627 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 INSRP06213 1382 aa26.31■■□□□ 1.8
VARS2-202ENST00000421263 MEGF6O75095 1541 aa26.3■■□□□ 1.8
VARS2-202ENST00000421263 ZBTB7AO95365 584 aa26.3■■□□□ 1.8
VARS2-202ENST00000421263 HSP90AB2PQ58FF8 381 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms