RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
FAAP20-208ENST00000420964 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
FAAP20-208ENST00000420964 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
FAAP20-208ENST00000420964 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
FAAP20-208ENST00000420964 AMPHP49418 695 aa16.46■□□□□ 0.23
FAAP20-208ENST00000420964 ABCC6O95255 1503 aa16.45■□□□□ 0.22
FAAP20-208ENST00000420964 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
FAAP20-208ENST00000420964 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
FAAP20-208ENST00000420964 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
FAAP20-208ENST00000420964 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
FAAP20-208ENST00000420964 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
FAAP20-208ENST00000420964 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
FAAP20-208ENST00000420964 HOXC9P31274 260 aa16.43■□□□□ 0.22
FAAP20-208ENST00000420964 IL13P35225 146 aa16.43■□□□□ 0.22
FAAP20-208ENST00000420964 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
FAAP20-208ENST00000420964 ARHGEF25Q86VW2 580 aa16.43■□□□□ 0.22
FAAP20-208ENST00000420964 CPDO75976 1380 aa16.42■□□□□ 0.22
FAAP20-208ENST00000420964 COL18A1P39060 1754 aa16.42■□□□□ 0.22
FAAP20-208ENST00000420964 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
FAAP20-208ENST00000420964 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
FAAP20-208ENST00000420964 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
FAAP20-208ENST00000420964 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
FAAP20-208ENST00000420964 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
FAAP20-208ENST00000420964 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
FAAP20-208ENST00000420964 IP6K1Q92551 441 aa16.41■□□□□ 0.22
FAAP20-208ENST00000420964 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
FAAP20-208ENST00000420964 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
FAAP20-208ENST00000420964 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
FAAP20-208ENST00000420964 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
FAAP20-208ENST00000420964 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
FAAP20-208ENST00000420964 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
FAAP20-208ENST00000420964 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
FAAP20-208ENST00000420964 AFF2P51816 1311 aa16.38■□□□□ 0.21
FAAP20-208ENST00000420964 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAAP20-208ENST00000420964 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
FAAP20-208ENST00000420964 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
FAAP20-208ENST00000420964 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
FAAP20-208ENST00000420964 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
FAAP20-208ENST00000420964 RXRBP28702 533 aa16.35■□□□□ 0.21
FAAP20-208ENST00000420964 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
FAAP20-208ENST00000420964 COL14A1Q05707 1796 aaKnown RBP16.35■□□□□ 0.21
FAAP20-208ENST00000420964 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
FAAP20-208ENST00000420964 FCHSD2O94868 740 aa16.33■□□□□ 0.2
FAAP20-208ENST00000420964 HMOX1P09601 288 aa16.33■□□□□ 0.2
FAAP20-208ENST00000420964 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
FAAP20-208ENST00000420964 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.2
FAAP20-208ENST00000420964 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 ERBB3P21860 1342 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 KDRP35968 1356 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 EYA1Q99502 592 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 MAPK8IP3Q9UPT6 1336 aa16.32■□□□□ 0.2
FAAP20-208ENST00000420964 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
FAAP20-208ENST00000420964 COL5A2P05997 1499 aaPredicted RBP16.31■□□□□ 0.2
FAAP20-208ENST00000420964 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
FAAP20-208ENST00000420964 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
FAAP20-208ENST00000420964 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
FAAP20-208ENST00000420964 APAF1O14727 1248 aa16.3■□□□□ 0.2
FAAP20-208ENST00000420964 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 NEFMP07197 916 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 RGS12O14924 1447 aa16.28■□□□□ 0.2
FAAP20-208ENST00000420964 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
FAAP20-208ENST00000420964 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
FAAP20-208ENST00000420964 NGLY1Q96IV0 654 aa16.27■□□□□ 0.2
FAAP20-208ENST00000420964 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
FAAP20-208ENST00000420964 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
FAAP20-208ENST00000420964 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
FAAP20-208ENST00000420964 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
FAAP20-208ENST00000420964 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
FAAP20-208ENST00000420964 WDR17Q8IZU2 1322 aa16.25■□□□□ 0.19
FAAP20-208ENST00000420964 RBM6P78332 1123 aaKnown RBP16.25■□□□□ 0.19
FAAP20-208ENST00000420964 PHACTR3Q96KR7 559 aa16.25■□□□□ 0.19
FAAP20-208ENST00000420964 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
FAAP20-208ENST00000420964 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
FAAP20-208ENST00000420964 DLG5Q8TDM6 1919 aa16.25■□□□□ 0.19
FAAP20-208ENST00000420964 TMPOP42166 694 aaKnown RBP16.23■□□□□ 0.19
FAAP20-208ENST00000420964 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
FAAP20-208ENST00000420964 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
FAAP20-208ENST00000420964 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
FAAP20-208ENST00000420964 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
FAAP20-208ENST00000420964 NEUROD2Q15784 382 aa16.22■□□□□ 0.19
FAAP20-208ENST00000420964 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
FAAP20-208ENST00000420964 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
FAAP20-208ENST00000420964 USP21Q9UK80 565 aa16.22■□□□□ 0.19
FAAP20-208ENST00000420964 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
FAAP20-208ENST00000420964 SLIT2O94813 1529 aa16.21■□□□□ 0.19
FAAP20-208ENST00000420964 EVA1CP58658 441 aa16.21■□□□□ 0.19
FAAP20-208ENST00000420964 CCDC27Q2M243 656 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms