RNA–Protein interactions for RNA: ENST00000420732.6

MS4A6A-202, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 1 (best) BASIC

Gene MS4A6A, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-202ENST00000420732 ZNF772Q68DY9 489 aaPredicted RBP8.71□□□□□ -1.02
MS4A6A-202ENST00000420732 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.71□□□□□ -1.02
MS4A6A-202ENST00000420732 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.02
MS4A6A-202ENST00000420732 TECPR2O15040 1411 aa8.71□□□□□ -1.02
MS4A6A-202ENST00000420732 SCAF11Q99590 1463 aaKnown RBP8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 C11orf95C9JLR9 678 aaPredicted RBP8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 THEMISQ8N1K5 641 aaPredicted RBP8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 TMEM94Q12767 1356 aa8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 USP47Q96K76 1375 aa8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
MS4A6A-202ENST00000420732 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 KNDC1Q76NI1 1749 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 PSEN2P49810 448 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 EIF4G2P78344 907 aaKnown RBP eCLIP8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 IFFO2Q5TF58 517 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 ABCC11Q96J66 1382 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 DIP2AQ14689 1571 aa8.69□□□□□ -1.02
MS4A6A-202ENST00000420732 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
MS4A6A-202ENST00000420732 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
MS4A6A-202ENST00000420732 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
MS4A6A-202ENST00000420732 METP08581 1390 aa8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 LRPPRCP42704 1394 aaKnown RBP8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 DMRTA1Q5VZB9 504 aa8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 KCNK17Q96T54 332 aa8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 CARD11Q9BXL7 1154 aa8.67□□□□□ -1.02
MS4A6A-202ENST00000420732 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 YTHDC2Q9H6S0 1430 aaKnown RBP8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 SPATA31A6Q5VVP1 1343 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 ST20-MTHFSA0A0A6YYL1 179 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 HRO43593 1189 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 CHD2O14647 1828 aaKnown RBP8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
MS4A6A-202ENST00000420732 LRP5O75197 1615 aa8.65□□□□□ -1.02
MS4A6A-202ENST00000420732 NUTM2DQ5VT03 806 aaPredicted RBP8.65□□□□□ -1.02
MS4A6A-202ENST00000420732 TXNDC2Q86VQ3 553 aa8.65□□□□□ -1.02
MS4A6A-202ENST00000420732 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
MS4A6A-202ENST00000420732 CCDC7Q96M83 1385 aa8.64□□□□□ -1.03
MS4A6A-202ENST00000420732 AFF2P51816 1311 aa8.64□□□□□ -1.03
MS4A6A-202ENST00000420732 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
MS4A6A-202ENST00000420732 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
MS4A6A-202ENST00000420732 EP400Q96L91 3159 aa8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 SHPRHQ149N8 1683 aa8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 KIF7Q2M1P5 1343 aa8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 BCL2L12Q9HB09 334 aa8.63□□□□□ -1.03
MS4A6A-202ENST00000420732 NWD1Q149M9 1564 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 FOSBP53539 338 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 HIRIP3Q9BW71 556 aaPredicted RBP8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 SLC4A5Q9BY07 1137 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 QRICH2Q9H0J4 1663 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 PTCH1Q13635 1447 aa8.62□□□□□ -1.03
MS4A6A-202ENST00000420732 TULP4Q9NRJ4 1543 aa8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 PTPREP23469 700 aa8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 VPS9D1Q9Y2B5 631 aa8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 EID1Q9Y6B2 187 aa8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 ADGRB2O60241 1585 aa8.61□□□□□ -1.03
MS4A6A-202ENST00000420732 MYOM1P52179 1685 aa8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 EVI5O60447 810 aa8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 RBM6P78332 1123 aaKnown RBP8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 KCTD12Q96CX2 325 aaKnown RBP8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 EIF3AQ14152 1382 aaKnown RBP8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 ROBO2Q9HCK4 1378 aa8.6□□□□□ -1.03
MS4A6A-202ENST00000420732 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
MS4A6A-202ENST00000420732 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
MS4A6A-202ENST00000420732 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
MS4A6A-202ENST00000420732 PER1O15534 1290 aaPredicted RBP8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 KCNA6P17658 529 aa8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 MFSD10Q14728 455 aa8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
MS4A6A-202ENST00000420732 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
MS4A6A-202ENST00000420732 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
MS4A6A-202ENST00000420732 BCL9LQ86UU0 1499 aa8.57□□□□□ -1.04
MS4A6A-202ENST00000420732 NHSL1Q5SYE7 1610 aa8.56□□□□□ -1.04
MS4A6A-202ENST00000420732 GOLGA8CPA6NN73 597 aa8.56□□□□□ -1.04
MS4A6A-202ENST00000420732 PRAM1Q96QH2 718 aa8.56□□□□□ -1.04
MS4A6A-202ENST00000420732 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
MS4A6A-202ENST00000420732 NKTRP30414 1462 aaKnown RBP8.56□□□□□ -1.04
MS4A6A-202ENST00000420732 NCOA3Q9Y6Q9 1424 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms