RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-206ENST00000420706 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-206ENST00000420706 RTL1A6NKG5 1358 aa16.77■□□□□ 0.27
TMEM53-206ENST00000420706 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
TMEM53-206ENST00000420706 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
TMEM53-206ENST00000420706 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
TMEM53-206ENST00000420706 AXIN2Q9Y2T1 843 aa16.76■□□□□ 0.27
TMEM53-206ENST00000420706 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-206ENST00000420706 COL18A1P39060 1754 aa16.75■□□□□ 0.27
TMEM53-206ENST00000420706 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
TMEM53-206ENST00000420706 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
TMEM53-206ENST00000420706 IL13P35225 146 aa16.74■□□□□ 0.27
TMEM53-206ENST00000420706 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
TMEM53-206ENST00000420706 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
TMEM53-206ENST00000420706 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
TMEM53-206ENST00000420706 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
TMEM53-206ENST00000420706 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
TMEM53-206ENST00000420706 ABCC6O95255 1503 aa16.71■□□□□ 0.27
TMEM53-206ENST00000420706 LTV1Q96GA3 475 aaPredicted RBP16.71■□□□□ 0.27
TMEM53-206ENST00000420706 LMO7Q8WWI1 1683 aa16.7■□□□□ 0.26
TMEM53-206ENST00000420706 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
TMEM53-206ENST00000420706 LRP6O75581 1613 aa16.7■□□□□ 0.26
TMEM53-206ENST00000420706 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
TMEM53-206ENST00000420706 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
TMEM53-206ENST00000420706 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
TMEM53-206ENST00000420706 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
TMEM53-206ENST00000420706 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM53-206ENST00000420706 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-206ENST00000420706 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
TMEM53-206ENST00000420706 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
TMEM53-206ENST00000420706 ERBB3P21860 1342 aa16.68■□□□□ 0.26
TMEM53-206ENST00000420706 EYA1Q99502 592 aa16.67■□□□□ 0.26
TMEM53-206ENST00000420706 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
TMEM53-206ENST00000420706 EVA1CP58658 441 aa16.66■□□□□ 0.26
TMEM53-206ENST00000420706 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
TMEM53-206ENST00000420706 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
TMEM53-206ENST00000420706 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
TMEM53-206ENST00000420706 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
TMEM53-206ENST00000420706 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
TMEM53-206ENST00000420706 CSB-PGBD3P0DP91 1061 aa16.65■□□□□ 0.26
TMEM53-206ENST00000420706 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
TMEM53-206ENST00000420706 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-206ENST00000420706 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
TMEM53-206ENST00000420706 SLIT2O94813 1529 aa16.65■□□□□ 0.26
TMEM53-206ENST00000420706 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-206ENST00000420706 STRN4Q9NRL3 753 aa16.64■□□□□ 0.25
TMEM53-206ENST00000420706 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
TMEM53-206ENST00000420706 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
TMEM53-206ENST00000420706 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
TMEM53-206ENST00000420706 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
TMEM53-206ENST00000420706 PLCH1Q4KWH8 1693 aa16.62■□□□□ 0.25
TMEM53-206ENST00000420706 FCHSD2O94868 740 aa16.62■□□□□ 0.25
TMEM53-206ENST00000420706 HMOX1P09601 288 aa16.62■□□□□ 0.25
TMEM53-206ENST00000420706 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
TMEM53-206ENST00000420706 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
TMEM53-206ENST00000420706 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 NWD2Q9ULI1 1742 aa16.61■□□□□ 0.25
TMEM53-206ENST00000420706 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
TMEM53-206ENST00000420706 CARD10Q9BWT7 1032 aa16.6■□□□□ 0.25
TMEM53-206ENST00000420706 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
TMEM53-206ENST00000420706 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
TMEM53-206ENST00000420706 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
TMEM53-206ENST00000420706 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
TMEM53-206ENST00000420706 USP21Q9UK80 565 aa16.59■□□□□ 0.25
TMEM53-206ENST00000420706 KDRP35968 1356 aa16.59■□□□□ 0.25
TMEM53-206ENST00000420706 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
TMEM53-206ENST00000420706 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
TMEM53-206ENST00000420706 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
TMEM53-206ENST00000420706 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
TMEM53-206ENST00000420706 CRB1P82279 1406 aa16.58■□□□□ 0.24
TMEM53-206ENST00000420706 AFF2P51816 1311 aa16.57■□□□□ 0.24
TMEM53-206ENST00000420706 VPS72Q15906 364 aa16.56■□□□□ 0.24
TMEM53-206ENST00000420706 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
TMEM53-206ENST00000420706 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
TMEM53-206ENST00000420706 SPATA31A5Q5VU36 1347 aa16.54■□□□□ 0.24
TMEM53-206ENST00000420706 SPATA31A7Q8IWB4 1347 aa16.54■□□□□ 0.24
TMEM53-206ENST00000420706 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
TMEM53-206ENST00000420706 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
TMEM53-206ENST00000420706 NEFMP07197 916 aa16.53■□□□□ 0.24
TMEM53-206ENST00000420706 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
TMEM53-206ENST00000420706 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
TMEM53-206ENST00000420706 APAF1O14727 1248 aa16.52■□□□□ 0.24
TMEM53-206ENST00000420706 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-206ENST00000420706 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
TMEM53-206ENST00000420706 THRAP3Q9Y2W1 955 aaKnown RBP16.52■□□□□ 0.24
TMEM53-206ENST00000420706 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.24
TMEM53-206ENST00000420706 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
TMEM53-206ENST00000420706 IL2RBP14784 551 aa16.51■□□□□ 0.23
TMEM53-206ENST00000420706 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
TMEM53-206ENST00000420706 TRPC5Q9UL62 973 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-206ENST00000420706 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
TMEM53-206ENST00000420706 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
TMEM53-206ENST00000420706 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-206ENST00000420706 RGS17Q9UGC6 210 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-206ENST00000420706 ATRNO75882 1429 aa16.5■□□□□ 0.23
TMEM53-206ENST00000420706 MEGF6O75095 1541 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms