RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
ECHDC3-202ENST00000420401 EVA1CP58658 441 aa25.25■■□□□ 1.63
ECHDC3-202ENST00000420401 KCNH5Q8NCM2 988 aa25.25■■□□□ 1.63
ECHDC3-202ENST00000420401 PIK3C2AO00443 1686 aa25.25■■□□□ 1.63
ECHDC3-202ENST00000420401 CPDO75976 1380 aa25.24■■□□□ 1.63
ECHDC3-202ENST00000420401 PARD3Q8TEW0 1356 aa25.24■■□□□ 1.63
ECHDC3-202ENST00000420401 PDE3BQ13370 1112 aa25.24■■□□□ 1.63
ECHDC3-202ENST00000420401 NME9Q86XW9 330 aa25.24■■□□□ 1.63
ECHDC3-202ENST00000420401 POLR3GLQ9BT43 218 aa25.24■■□□□ 1.63
ECHDC3-202ENST00000420401 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
ECHDC3-202ENST00000420401 NBPF14Q5TI25 921 aa25.22■■□□□ 1.63
ECHDC3-202ENST00000420401 SLIT3O75094 1523 aa25.22■■□□□ 1.63
ECHDC3-202ENST00000420401 RREB1Q92766 1687 aa25.19■■□□□ 1.62
ECHDC3-202ENST00000420401 ZBTB7CA1YPR0 619 aa25.18■■□□□ 1.62
ECHDC3-202ENST00000420401 SOX12O15370 315 aa25.18■■□□□ 1.62
ECHDC3-202ENST00000420401 NUP188Q5SRE5 1749 aa25.17■■□□□ 1.62
ECHDC3-202ENST00000420401 YY1P25490 414 aa25.17■■□□□ 1.62
ECHDC3-202ENST00000420401 BARGINQ6ZT62 677 aa25.17■■□□□ 1.62
ECHDC3-202ENST00000420401 COG3Q96JB2 828 aa25.15■■□□□ 1.62
ECHDC3-202ENST00000420401 PPP1R1BQ9UD71 204 aaPredicted RBP25.15■■□□□ 1.62
ECHDC3-202ENST00000420401 DCAF8L1A6NGE4 600 aa25.14■■□□□ 1.62
ECHDC3-202ENST00000420401 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.62
ECHDC3-202ENST00000420401 AATKQ6ZMQ8 1374 aa25.14■■□□□ 1.61
ECHDC3-202ENST00000420401 C11orf95C9JLR9 678 aaPredicted RBP25.13■■□□□ 1.61
ECHDC3-202ENST00000420401 TCP11L2Q8N4U5 519 aa25.13■■□□□ 1.61
ECHDC3-202ENST00000420401 CARD14Q9BXL6 1004 aa25.13■■□□□ 1.61
ECHDC3-202ENST00000420401 LARP1Q6PKG0 1096 aaKnown RBP25.12■■□□□ 1.61
ECHDC3-202ENST00000420401 MYOM1P52179 1685 aa25.12■■□□□ 1.61
ECHDC3-202ENST00000420401 USP54Q70EL1 1684 aa25.11■■□□□ 1.61
ECHDC3-202ENST00000420401 FYB1O15117 783 aa25.11■■□□□ 1.61
ECHDC3-202ENST00000420401 SPON1Q9HCB6 807 aa25.11■■□□□ 1.61
ECHDC3-202ENST00000420401 OVOS2A0A0J9YW53 1432 aa25.11■■□□□ 1.61
ECHDC3-202ENST00000420401 OVOS2Q6IE36 1432 aa25.11■■□□□ 1.61
ECHDC3-202ENST00000420401 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
ECHDC3-202ENST00000420401 NFAT5O94916 1531 aa25.09■■□□□ 1.61
ECHDC3-202ENST00000420401 NSD3Q9BZ95 1437 aa25.09■■□□□ 1.61
ECHDC3-202ENST00000420401 THRAP3Q9Y2W1 955 aaKnown RBP25.08■■□□□ 1.61
ECHDC3-202ENST00000420401 KIF7Q2M1P5 1343 aa25.08■■□□□ 1.6
ECHDC3-202ENST00000420401 LMO7Q8WWI1 1683 aa25.07■■□□□ 1.6
ECHDC3-202ENST00000420401 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
ECHDC3-202ENST00000420401 PANK3Q9H999 370 aa25.07■■□□□ 1.6
ECHDC3-202ENST00000420401 KCNQ2O43526 872 aa25.06■■□□□ 1.6
ECHDC3-202ENST00000420401 CGNL1Q0VF96 1302 aa25.06■■□□□ 1.6
ECHDC3-202ENST00000420401 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
ECHDC3-202ENST00000420401 AXIN2Q9Y2T1 843 aa25.05■■□□□ 1.6
ECHDC3-202ENST00000420401 COL5A2P05997 1499 aaPredicted RBP25.04■■□□□ 1.6
ECHDC3-202ENST00000420401 ABCC6O95255 1503 aa25.02■■□□□ 1.6
ECHDC3-202ENST00000420401 COL18A1P39060 1754 aa25■■□□□ 1.59
ECHDC3-202ENST00000420401 SBF2Q86WG5 1849 aa25■■□□□ 1.59
ECHDC3-202ENST00000420401 CSB-PGBD3P0DP91 1061 aa25■■□□□ 1.59
ECHDC3-202ENST00000420401 TOM1L2Q6ZVM7 507 aa25■■□□□ 1.59
ECHDC3-202ENST00000420401 OVOS2A0A0G2JMS6 1433 aa24.99■■□□□ 1.59
ECHDC3-202ENST00000420401 CRB1P82279 1406 aa24.99■■□□□ 1.59
ECHDC3-202ENST00000420401 WDR17Q8IZU2 1322 aa24.99■■□□□ 1.59
ECHDC3-202ENST00000420401 RGPD3A6NKT7 1758 aaPredicted RBP24.98■■□□□ 1.59
ECHDC3-202ENST00000420401 RGPD4Q7Z3J3 1758 aa24.98■■□□□ 1.59
ECHDC3-202ENST00000420401 CCDC7Q96M83 1385 aa24.97■■□□□ 1.59
ECHDC3-202ENST00000420401 AMPHP49418 695 aa24.97■■□□□ 1.59
ECHDC3-202ENST00000420401 IP6K1Q92551 441 aa24.97■■□□□ 1.59
ECHDC3-202ENST00000420401 KIF20BQ96Q89 1820 aa24.97■■□□□ 1.59
ECHDC3-202ENST00000420401 MAP3K19Q56UN5 1328 aa24.96■■□□□ 1.59
ECHDC3-202ENST00000420401 PLSCR1O15162 318 aa24.96■■□□□ 1.59
ECHDC3-202ENST00000420401 DDB1Q16531 1140 aa24.96■■□□□ 1.59
ECHDC3-202ENST00000420401 KNSTRNQ9Y448 316 aa24.96■■□□□ 1.59
ECHDC3-202ENST00000420401 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
ECHDC3-202ENST00000420401 FBLN1P23142 703 aa24.95■■□□□ 1.58
ECHDC3-202ENST00000420401 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
ECHDC3-202ENST00000420401 PEAK1Q9H792 1746 aa24.95■■□□□ 1.58
ECHDC3-202ENST00000420401 LTN1O94822 1766 aa24.94■■□□□ 1.58
ECHDC3-202ENST00000420401 RRS1Q15050 365 aaKnown RBP24.93■■□□□ 1.58
ECHDC3-202ENST00000420401 ANKRD24Q8TF21 1146 aa24.93■■□□□ 1.58
ECHDC3-202ENST00000420401 CARD10Q9BWT7 1032 aa24.93■■□□□ 1.58
ECHDC3-202ENST00000420401 ERBB3P21860 1342 aa24.92■■□□□ 1.58
ECHDC3-202ENST00000420401 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
ECHDC3-202ENST00000420401 LRRC37A3O60309 1634 aa24.92■■□□□ 1.58
ECHDC3-202ENST00000420401 NSD2O96028 1365 aa24.92■■□□□ 1.58
ECHDC3-202ENST00000420401 HOXC9P31274 260 aa24.91■■□□□ 1.58
ECHDC3-202ENST00000420401 RTL1A6NKG5 1358 aa24.91■■□□□ 1.58
ECHDC3-202ENST00000420401 CDCA7Q9BWT1 371 aaPredicted RBP24.89■■□□□ 1.58
ECHDC3-202ENST00000420401 NLRP2Q9NX02 1062 aa24.89■■□□□ 1.58
ECHDC3-202ENST00000420401 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
ECHDC3-202ENST00000420401 RGPD5Q99666 1765 aa24.89■■□□□ 1.57
ECHDC3-202ENST00000420401 LTV1Q96GA3 475 aaPredicted RBP24.88■■□□□ 1.57
ECHDC3-202ENST00000420401 ANO8Q9HCE9 1232 aaPredicted RBP24.88■■□□□ 1.57
ECHDC3-202ENST00000420401 KIF24Q5T7B8 1368 aa24.88■■□□□ 1.57
ECHDC3-202ENST00000420401 WNK3Q9BYP7 1800 aa24.88■■□□□ 1.57
ECHDC3-202ENST00000420401 ZBTB7AO95365 584 aa24.86■■□□□ 1.57
ECHDC3-202ENST00000420401 MORC1Q86VD1 984 aa24.85■■□□□ 1.57
ECHDC3-202ENST00000420401 FLT4P35916 1363 aa24.84■■□□□ 1.57
ECHDC3-202ENST00000420401 PER1O15534 1290 aaPredicted RBP24.84■■□□□ 1.57
ECHDC3-202ENST00000420401 TNNT2P45379 298 aaPredicted RBP24.84■■□□□ 1.57
ECHDC3-202ENST00000420401 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
ECHDC3-202ENST00000420401 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 AMER1Q5JTC6 1135 aaPredicted RBP24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 PDGFDQ9GZP0 370 aaPredicted RBP24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 STK32BQ9NY57 414 aa24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 EMILIN1Q9Y6C2 1016 aa24.83■■□□□ 1.57
ECHDC3-202ENST00000420401 INSRP06213 1382 aa24.82■■□□□ 1.56
ECHDC3-202ENST00000420401 HSP90AB2PQ58FF8 381 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms