RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 AMER1Q5JTC6 1135 aaPredicted RBP28.28■■■□□ 2.12
HMGXB4-203ENST00000420166 FBLN1P23142 703 aa28.27■■■□□ 2.12
HMGXB4-203ENST00000420166 ILDR2Q71H61 639 aa28.27■■■□□ 2.12
HMGXB4-203ENST00000420166 STRN4Q9NRL3 753 aa28.27■■■□□ 2.12
HMGXB4-203ENST00000420166 AXIN2Q9Y2T1 843 aa28.27■■■□□ 2.12
HMGXB4-203ENST00000420166 GLI3P10071 1580 aa28.27■■■□□ 2.12
HMGXB4-203ENST00000420166 MAP3K19Q56UN5 1328 aa28.26■■■□□ 2.11
HMGXB4-203ENST00000420166 GJD4Q96KN9 370 aaPredicted RBP28.26■■■□□ 2.11
HMGXB4-203ENST00000420166 EVA1CP58658 441 aa28.24■■■□□ 2.11
HMGXB4-203ENST00000420166 CCDC9Q9Y3X0 531 aaKnown RBP28.24■■■□□ 2.11
HMGXB4-203ENST00000420166 MAP2P11137 1827 aaKnown RBP28.23■■■□□ 2.11
HMGXB4-203ENST00000420166 CDK12Q9NYV4 1490 aaPredicted RBP28.23■■■□□ 2.11
HMGXB4-203ENST00000420166 RRS1Q15050 365 aaKnown RBP28.22■■■□□ 2.11
HMGXB4-203ENST00000420166 RTL1A6NKG5 1358 aa28.22■■■□□ 2.11
HMGXB4-203ENST00000420166 SPATA31A5Q5VU36 1347 aa28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 SPATA31A7Q8IWB4 1347 aa28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 BLMP54132 1417 aaPredicted RBP28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 IP6K1Q92551 441 aa28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 NPC1L1Q9UHC9 1359 aa28.21■■■□□ 2.11
HMGXB4-203ENST00000420166 AMPHP49418 695 aa28.2■■■□□ 2.1
HMGXB4-203ENST00000420166 PEAK1Q9H792 1746 aa28.2■■■□□ 2.1
HMGXB4-203ENST00000420166 MORC1Q86VD1 984 aa28.19■■■□□ 2.1
HMGXB4-203ENST00000420166 HOXC9P31274 260 aa28.18■■■□□ 2.1
HMGXB4-203ENST00000420166 RGS12O14924 1447 aa28.18■■■□□ 2.1
HMGXB4-203ENST00000420166 CRB1P82279 1406 aa28.18■■■□□ 2.1
HMGXB4-203ENST00000420166 SPATA31A1Q5TZJ5 1347 aa28.18■■■□□ 2.1
HMGXB4-203ENST00000420166 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
HMGXB4-203ENST00000420166 KIF24Q5T7B8 1368 aa28.17■■■□□ 2.1
HMGXB4-203ENST00000420166 TNNT2P45379 298 aaPredicted RBP28.17■■■□□ 2.1
HMGXB4-203ENST00000420166 ERBB3P21860 1342 aa28.16■■■□□ 2.1
HMGXB4-203ENST00000420166 FLT4P35916 1363 aa28.15■■■□□ 2.1
HMGXB4-203ENST00000420166 CC2D1BQ5T0F9 858 aaKnown RBP28.15■■■□□ 2.1
HMGXB4-203ENST00000420166 EMILIN1Q9Y6C2 1016 aa28.15■■■□□ 2.1
HMGXB4-203ENST00000420166 CSB-PGBD3P0DP91 1061 aa28.14■■■□□ 2.1
HMGXB4-203ENST00000420166 FAM208AQ9UK61 1670 aaKnown RBP28.13■■■□□ 2.09
HMGXB4-203ENST00000420166 ANKRD24Q8TF21 1146 aa28.13■■■□□ 2.09
HMGXB4-203ENST00000420166 POLKQ9UBT6 870 aa28.13■■■□□ 2.09
HMGXB4-203ENST00000420166 TOM1L2Q6ZVM7 507 aa28.12■■■□□ 2.09
HMGXB4-203ENST00000420166 USP35Q9P2H5 1018 aa28.12■■■□□ 2.09
HMGXB4-203ENST00000420166 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
HMGXB4-203ENST00000420166 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
HMGXB4-203ENST00000420166 SMG6Q86US8 1419 aaKnown RBP28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 ZNF316A6NFI3 1004 aaPredicted RBP28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 FAM98CQ17RN3 349 aaKnown RBP28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 TCP11L2Q8N4U5 519 aa28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 INSRP06213 1382 aa28.1■■■□□ 2.09
HMGXB4-203ENST00000420166 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
HMGXB4-203ENST00000420166 WNK3Q9BYP7 1800 aa28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 HSP90AB2PQ58FF8 381 aa28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 BARGINQ6ZT62 677 aa28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 LTV1Q96GA3 475 aaPredicted RBP28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 CARD10Q9BWT7 1032 aa28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 THRAP3Q9Y2W1 955 aaKnown RBP28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.09
HMGXB4-203ENST00000420166 RGPD2P0DJD1 1756 aa28.07■■■□□ 2.08
HMGXB4-203ENST00000420166 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
HMGXB4-203ENST00000420166 NLRP2Q9NX02 1062 aa28.06■■■□□ 2.08
HMGXB4-203ENST00000420166 A0A0G2JS52 829 aa28.04■■■□□ 2.08
HMGXB4-203ENST00000420166 MYT1Q01538 1121 aa28.04■■■□□ 2.08
HMGXB4-203ENST00000420166 PARP4Q9UKK3 1724 aaKnown RBP28.01■■■□□ 2.07
HMGXB4-203ENST00000420166 DISP2A7MBM2 1401 aa27.99■■■□□ 2.07
HMGXB4-203ENST00000420166 LRRC37A3O60309 1634 aa27.96■■■□□ 2.07
HMGXB4-203ENST00000420166 MTHFSP49914 203 aa27.96■■■□□ 2.07
HMGXB4-203ENST00000420166 NBPF6Q5VWK0 638 aa27.96■■■□□ 2.07
HMGXB4-203ENST00000420166 NBPF4Q96M43 638 aa27.96■■■□□ 2.07
HMGXB4-203ENST00000420166 CDCA7Q9BWT1 371 aaPredicted RBP27.96■■■□□ 2.07
HMGXB4-203ENST00000420166 EIF4A2Q14240 407 aaKnown RBP27.95■■■□□ 2.06
HMGXB4-203ENST00000420166 PARD3Q8TEW0 1356 aa27.95■■■□□ 2.06
HMGXB4-203ENST00000420166 KRT27Q7Z3Y8 459 aa27.94■■■□□ 2.06
HMGXB4-203ENST00000420166 IL2RBP14784 551 aa27.92■■■□□ 2.06
HMGXB4-203ENST00000420166 NCAPD2Q15021 1401 aa27.92■■■□□ 2.06
HMGXB4-203ENST00000420166 USHBP1Q8N6Y0 703 aa27.91■■■□□ 2.06
HMGXB4-203ENST00000420166 PPP2R1AP30153 589 aa27.9■■■□□ 2.06
HMGXB4-203ENST00000420166 EYA1Q99502 592 aa27.89■■■□□ 2.06
HMGXB4-203ENST00000420166 SOCS7O14512 581 aa27.88■■■□□ 2.05
HMGXB4-203ENST00000420166 DDB1Q16531 1140 aa27.88■■■□□ 2.05
HMGXB4-203ENST00000420166 TNS2Q63HR2 1409 aa27.88■■■□□ 2.05
HMGXB4-203ENST00000420166 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
HMGXB4-203ENST00000420166 MEGF6O75095 1541 aa27.87■■■□□ 2.05
HMGXB4-203ENST00000420166 RGPD1P0DJD0 1748 aa27.87■■■□□ 2.05
HMGXB4-203ENST00000420166 PDE3BQ13370 1112 aa27.86■■■□□ 2.05
HMGXB4-203ENST00000420166 IGSF1Q8N6C5 1336 aa27.86■■■□□ 2.05
HMGXB4-203ENST00000420166 IL13P35225 146 aa27.85■■■□□ 2.05
HMGXB4-203ENST00000420166 RALBP1Q15311 655 aa27.85■■■□□ 2.05
HMGXB4-203ENST00000420166 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
HMGXB4-203ENST00000420166 EXOC5O00471 708 aa27.83■■■□□ 2.05
HMGXB4-203ENST00000420166 RAPGEF4Q8WZA2 1011 aa27.83■■■□□ 2.05
HMGXB4-203ENST00000420166 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
HMGXB4-203ENST00000420166 EP400Q96L91 3159 aa27.81■■■□□ 2.04
HMGXB4-203ENST00000420166 DIAPH1O60610 1272 aaKnown RBP27.81■■■□□ 2.04
HMGXB4-203ENST00000420166 CFAP53Q96M91 514 aa27.81■■■□□ 2.04
HMGXB4-203ENST00000420166 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
HMGXB4-203ENST00000420166 TATP17735 454 aaPredicted RBP27.79■■■□□ 2.04
HMGXB4-203ENST00000420166 MARCH10Q8NA82 808 aaPredicted RBP27.78■■■□□ 2.04
HMGXB4-203ENST00000420166 PKD1L3Q7Z443 1732 aa27.78■■■□□ 2.04
HMGXB4-203ENST00000420166 UPF1Q92900 1129 aaKnown RBP eCLIP27.77■■■□□ 2.04
HMGXB4-203ENST00000420166 FAM196AQ6ZSG2 479 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms