RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 CCDC9Q9Y3X0 531 aaKnown RBP22.9■■□□□ 1.26
SEC22C-206ENST00000420163 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
SEC22C-206ENST00000420163 ABCC6O95255 1503 aa22.89■■□□□ 1.26
SEC22C-206ENST00000420163 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
SEC22C-206ENST00000420163 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
SEC22C-206ENST00000420163 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
SEC22C-206ENST00000420163 SOCS7O14512 581 aa22.88■■□□□ 1.25
SEC22C-206ENST00000420163 FBLN1P23142 703 aa22.88■■□□□ 1.25
SEC22C-206ENST00000420163 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
SEC22C-206ENST00000420163 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
SEC22C-206ENST00000420163 SPATA31A1Q5TZJ5 1347 aa22.84■■□□□ 1.25
SEC22C-206ENST00000420163 EVA1CP58658 441 aa22.84■■□□□ 1.25
SEC22C-206ENST00000420163 PEAK1Q9H792 1746 aa22.84■■□□□ 1.25
SEC22C-206ENST00000420163 WNK3Q9BYP7 1800 aa22.84■■□□□ 1.25
SEC22C-206ENST00000420163 CGNL1Q0VF96 1302 aa22.83■■□□□ 1.25
SEC22C-206ENST00000420163 MAP3K19Q56UN5 1328 aa22.82■■□□□ 1.24
SEC22C-206ENST00000420163 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
SEC22C-206ENST00000420163 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
SEC22C-206ENST00000420163 CRB1P82279 1406 aa22.81■■□□□ 1.24
SEC22C-206ENST00000420163 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
SEC22C-206ENST00000420163 RGPD2P0DJD1 1756 aa22.79■■□□□ 1.24
SEC22C-206ENST00000420163 ONECUT3O60422 494 aaPredicted RBP22.79■■□□□ 1.24
SEC22C-206ENST00000420163 RRS1Q15050 365 aaKnown RBP22.79■■□□□ 1.24
SEC22C-206ENST00000420163 SEPT12Q8IYM1 358 aa22.79■■□□□ 1.24
SEC22C-206ENST00000420163 WDR17Q8IZU2 1322 aa22.79■■□□□ 1.24
SEC22C-206ENST00000420163 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
SEC22C-206ENST00000420163 IP6K1Q92551 441 aa22.76■■□□□ 1.23
SEC22C-206ENST00000420163 FAM208AQ9UK61 1670 aaKnown RBP22.76■■□□□ 1.23
SEC22C-206ENST00000420163 PARP4Q9UKK3 1724 aaKnown RBP22.76■■□□□ 1.23
SEC22C-206ENST00000420163 ERBB3P21860 1342 aa22.76■■□□□ 1.23
SEC22C-206ENST00000420163 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
SEC22C-206ENST00000420163 EP400Q96L91 3159 aa22.75■■□□□ 1.23
SEC22C-206ENST00000420163 NSD2O96028 1365 aa22.75■■□□□ 1.23
SEC22C-206ENST00000420163 A0A0G2JS52 829 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 CSB-PGBD3P0DP91 1061 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 HOXC9P31274 260 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 ZEB1P37275 1124 aaPredicted RBP22.74■■□□□ 1.23
SEC22C-206ENST00000420163 MYT1Q01538 1121 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 ANKRD24Q8TF21 1146 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
SEC22C-206ENST00000420163 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
SEC22C-206ENST00000420163 AMPHP49418 695 aa22.73■■□□□ 1.23
SEC22C-206ENST00000420163 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
SEC22C-206ENST00000420163 TCP11L2Q8N4U5 519 aa22.73■■□□□ 1.23
SEC22C-206ENST00000420163 LRRC37A3O60309 1634 aa22.72■■□□□ 1.23
SEC22C-206ENST00000420163 BARGINQ6ZT62 677 aa22.72■■□□□ 1.23
SEC22C-206ENST00000420163 EMILIN1Q9Y6C2 1016 aa22.72■■□□□ 1.23
SEC22C-206ENST00000420163 TNNT2P45379 298 aaPredicted RBP22.71■■□□□ 1.23
SEC22C-206ENST00000420163 LTV1Q96GA3 475 aaPredicted RBP22.7■■□□□ 1.22
SEC22C-206ENST00000420163 CARD10Q9BWT7 1032 aa22.7■■□□□ 1.22
SEC22C-206ENST00000420163 THRAP3Q9Y2W1 955 aaKnown RBP22.7■■□□□ 1.22
SEC22C-206ENST00000420163 FLT4P35916 1363 aa22.69■■□□□ 1.22
SEC22C-206ENST00000420163 DISP2A7MBM2 1401 aa22.68■■□□□ 1.22
SEC22C-206ENST00000420163 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
SEC22C-206ENST00000420163 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
SEC22C-206ENST00000420163 NLRP2Q9NX02 1062 aa22.67■■□□□ 1.22
SEC22C-206ENST00000420163 POLKQ9UBT6 870 aa22.67■■□□□ 1.22
SEC22C-206ENST00000420163 INSRP06213 1382 aa22.66■■□□□ 1.22
SEC22C-206ENST00000420163 KIF24Q5T7B8 1368 aa22.66■■□□□ 1.22
SEC22C-206ENST00000420163 MORC1Q86VD1 984 aa22.66■■□□□ 1.22
SEC22C-206ENST00000420163 UPF1Q92900 1129 aaKnown RBP eCLIP22.66■■□□□ 1.22
SEC22C-206ENST00000420163 FAM182BQ5T319 152 aa22.65■■□□□ 1.22
SEC22C-206ENST00000420163 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
SEC22C-206ENST00000420163 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
SEC22C-206ENST00000420163 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
SEC22C-206ENST00000420163 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
SEC22C-206ENST00000420163 CNGB1Q14028 1251 aaPredicted RBP22.61■■□□□ 1.21
SEC22C-206ENST00000420163 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
SEC22C-206ENST00000420163 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
SEC22C-206ENST00000420163 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
SEC22C-206ENST00000420163 USHBP1Q8N6Y0 703 aa22.58■■□□□ 1.21
SEC22C-206ENST00000420163 SBF2Q86WG5 1849 aa22.58■■□□□ 1.21
SEC22C-206ENST00000420163 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
SEC22C-206ENST00000420163 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
SEC22C-206ENST00000420163 PDE3BQ13370 1112 aa22.57■■□□□ 1.2
SEC22C-206ENST00000420163 DDB1Q16531 1140 aa22.57■■□□□ 1.2
SEC22C-206ENST00000420163 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
SEC22C-206ENST00000420163 RGPD1P0DJD0 1748 aa22.57■■□□□ 1.2
SEC22C-206ENST00000420163 MEGF6O75095 1541 aa22.57■■□□□ 1.2
SEC22C-206ENST00000420163 IL2RBP14784 551 aa22.55■■□□□ 1.2
SEC22C-206ENST00000420163 NCAPD2Q15021 1401 aa22.55■■□□□ 1.2
SEC22C-206ENST00000420163 EIF4A2Q14240 407 aaKnown RBP22.53■■□□□ 1.2
SEC22C-206ENST00000420163 MARCH10Q8NA82 808 aaPredicted RBP22.53■■□□□ 1.2
SEC22C-206ENST00000420163 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
SEC22C-206ENST00000420163 EYA1Q99502 592 aa22.51■■□□□ 1.19
SEC22C-206ENST00000420163 EXOC5O00471 708 aa22.5■■□□□ 1.19
SEC22C-206ENST00000420163 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
SEC22C-206ENST00000420163 FAM196AQ6ZSG2 479 aa22.5■■□□□ 1.19
SEC22C-206ENST00000420163 PKD1L3Q7Z443 1732 aa22.49■■□□□ 1.19
SEC22C-206ENST00000420163 MTHFSP49914 203 aa22.49■■□□□ 1.19
SEC22C-206ENST00000420163 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
SEC22C-206ENST00000420163 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
SEC22C-206ENST00000420163 TRIM37O94972 964 aa22.45■■□□□ 1.18
SEC22C-206ENST00000420163 CCDC125Q86Z20 511 aa22.45■■□□□ 1.18
SEC22C-206ENST00000420163 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
SEC22C-206ENST00000420163 BCL9O00512 1426 aa22.44■■□□□ 1.18
SEC22C-206ENST00000420163 NHSQ6T4R5 1651 aa22.44■■□□□ 1.18
SEC22C-206ENST00000420163 DEFB132Q7Z7B7 95 aa22.44■■□□□ 1.18
SEC22C-206ENST00000420163 DOT1LQ8TEK3 1739 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms