RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 TRIM26Q12899 539 aaPredicted RBP28.9■■■□□ 2.22
MCF2L-212ENST00000420013 WDR17Q8IZU2 1322 aa28.9■■■□□ 2.22
MCF2L-212ENST00000420013 USP31Q70CQ4 1352 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 OVOS2A0A0G2JMS6 1433 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 OVOS2A0A0J9YW53 1432 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 OVOS2Q6IE36 1432 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 ZBTB7CA1YPR0 619 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 EN1Q05925 392 aaPredicted RBP28.89■■■□□ 2.22
MCF2L-212ENST00000420013 ARHGEF25Q86VW2 580 aa28.89■■■□□ 2.22
MCF2L-212ENST00000420013 LTN1O94822 1766 aa28.88■■■□□ 2.21
MCF2L-212ENST00000420013 EDC4Q6P2E9 1401 aaKnown RBP28.88■■■□□ 2.21
MCF2L-212ENST00000420013 SBF2Q86WG5 1849 aa28.88■■■□□ 2.21
MCF2L-212ENST00000420013 PUS7Q96PZ0 661 aaKnown RBP28.88■■■□□ 2.21
MCF2L-212ENST00000420013 NUP188Q5SRE5 1749 aa28.88■■■□□ 2.21
MCF2L-212ENST00000420013 NINLQ9Y2I6 1382 aa28.87■■■□□ 2.21
MCF2L-212ENST00000420013 TRIM37O94972 964 aa28.86■■■□□ 2.21
MCF2L-212ENST00000420013 TOM1L2Q6ZVM7 507 aa28.84■■■□□ 2.21
MCF2L-212ENST00000420013 HDGFL2Q7Z4V5 671 aaPredicted RBP28.84■■■□□ 2.21
MCF2L-212ENST00000420013 SLC24A1O60721 1099 aa28.83■■■□□ 2.21
MCF2L-212ENST00000420013 CDCA7Q9BWT1 371 aaPredicted RBP28.82■■■□□ 2.2
MCF2L-212ENST00000420013 CAMKK2Q96RR4 588 aa28.81■■■□□ 2.2
MCF2L-212ENST00000420013 AXIN2Q9Y2T1 843 aa28.81■■■□□ 2.2
MCF2L-212ENST00000420013 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
MCF2L-212ENST00000420013 CCDC7Q96M83 1385 aa28.8■■■□□ 2.2
MCF2L-212ENST00000420013 EZH2Q15910 746 aaKnown RBP28.8■■■□□ 2.2
MCF2L-212ENST00000420013 TERF2IPQ9NYB0 399 aa28.8■■■□□ 2.2
MCF2L-212ENST00000420013 APBA3O96018 575 aa28.79■■■□□ 2.2
MCF2L-212ENST00000420013 FAM208AQ9UK61 1670 aaKnown RBP28.79■■■□□ 2.2
MCF2L-212ENST00000420013 BCL9O00512 1426 aa28.78■■■□□ 2.2
MCF2L-212ENST00000420013 DDB1Q16531 1140 aa28.78■■■□□ 2.2
MCF2L-212ENST00000420013 TMC1Q8TDI8 760 aa28.78■■■□□ 2.2
MCF2L-212ENST00000420013 CARD10Q9BWT7 1032 aa28.78■■■□□ 2.2
MCF2L-212ENST00000420013 PSDA5PKW4 1024 aaPredicted RBP28.77■■■□□ 2.2
MCF2L-212ENST00000420013 SOX12O15370 315 aa28.77■■■□□ 2.2
MCF2L-212ENST00000420013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.76■■■□□ 2.19
MCF2L-212ENST00000420013 TNS2Q63HR2 1409 aa28.76■■■□□ 2.19
MCF2L-212ENST00000420013 TESK2Q96S53 571 aa28.75■■■□□ 2.19
MCF2L-212ENST00000420013 CSB-PGBD3P0DP91 1061 aa28.74■■■□□ 2.19
MCF2L-212ENST00000420013 NME9Q86XW9 330 aa28.74■■■□□ 2.19
MCF2L-212ENST00000420013 SLC12A5Q9H2X9 1139 aa28.74■■■□□ 2.19
MCF2L-212ENST00000420013 ERBB3P21860 1342 aa28.72■■■□□ 2.19
MCF2L-212ENST00000420013 ST20-MTHFSA0A0A6YYL1 179 aa28.71■■■□□ 2.19
MCF2L-212ENST00000420013 R3HDM1Q15032 1099 aaKnown RBP28.71■■■□□ 2.19
MCF2L-212ENST00000420013 USP47Q96K76 1375 aa28.69■■■□□ 2.18
MCF2L-212ENST00000420013 NHSQ6T4R5 1651 aa28.67■■■□□ 2.18
MCF2L-212ENST00000420013 ANKRD36BQ8N2N9 1353 aa28.67■■■□□ 2.18
MCF2L-212ENST00000420013 NBPF14Q5TI25 921 aa28.64■■■□□ 2.18
MCF2L-212ENST00000420013 PLSCR1O15162 318 aa28.63■■■□□ 2.17
MCF2L-212ENST00000420013 MARCH10Q8NA82 808 aaPredicted RBP28.63■■■□□ 2.17
MCF2L-212ENST00000420013 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
MCF2L-212ENST00000420013 CLSPNQ9HAW4 1339 aa28.63■■■□□ 2.17
MCF2L-212ENST00000420013 KIF20BQ96Q89 1820 aa28.62■■■□□ 2.17
MCF2L-212ENST00000420013 EXOC5O00471 708 aa28.61■■■□□ 2.17
MCF2L-212ENST00000420013 TMF1P82094 1093 aa28.61■■■□□ 2.17
MCF2L-212ENST00000420013 MYOM1P52179 1685 aa28.59■■■□□ 2.17
MCF2L-212ENST00000420013 ANKRD24Q8TF21 1146 aa28.59■■■□□ 2.17
MCF2L-212ENST00000420013 TIMELESSQ9UNS1 1208 aa28.59■■■□□ 2.17
MCF2L-212ENST00000420013 COG3Q96JB2 828 aa28.57■■■□□ 2.16
MCF2L-212ENST00000420013 NLRP2Q9NX02 1062 aa28.57■■■□□ 2.16
MCF2L-212ENST00000420013 RTL1A6NKG5 1358 aa28.57■■■□□ 2.16
MCF2L-212ENST00000420013 IL2RBP14784 551 aa28.56■■■□□ 2.16
MCF2L-212ENST00000420013 CDCA8Q53HL2 280 aa28.56■■■□□ 2.16
MCF2L-212ENST00000420013 CASZ1Q86V15 1759 aa28.55■■■□□ 2.16
MCF2L-212ENST00000420013 IP6K1Q92551 441 aa28.55■■■□□ 2.16
MCF2L-212ENST00000420013 BTAF1O14981 1849 aa28.53■■■□□ 2.16
MCF2L-212ENST00000420013 MAP3K19Q56UN5 1328 aa28.5■■■□□ 2.15
MCF2L-212ENST00000420013 RGPD2P0DJD1 1756 aa28.5■■■□□ 2.15
MCF2L-212ENST00000420013 SHANK3Q9BYB0 1731 aa28.47■■■□□ 2.15
MCF2L-212ENST00000420013 PTF1AQ7RTS3 328 aa28.47■■■□□ 2.15
MCF2L-212ENST00000420013 PAPPAQ13219 1627 aa28.47■■■□□ 2.15
MCF2L-212ENST00000420013 HOXC9P31274 260 aa28.46■■■□□ 2.15
MCF2L-212ENST00000420013 ANO8Q9HCE9 1232 aaPredicted RBP28.45■■■□□ 2.14
MCF2L-212ENST00000420013 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
MCF2L-212ENST00000420013 AMPHP49418 695 aa28.44■■■□□ 2.14
MCF2L-212ENST00000420013 DOT1LQ8TEK3 1739 aa28.43■■■□□ 2.14
MCF2L-212ENST00000420013 KAT6BQ8WYB5 2073 aa28.43■■■□□ 2.14
MCF2L-212ENST00000420013 KIF24Q5T7B8 1368 aa28.43■■■□□ 2.14
MCF2L-212ENST00000420013 SPON1Q9HCB6 807 aa28.43■■■□□ 2.14
MCF2L-212ENST00000420013 ANKRD26Q9UPS8 1709 aa28.43■■■□□ 2.14
MCF2L-212ENST00000420013 TXNRD1Q16881 649 aa28.42■■■□□ 2.14
MCF2L-212ENST00000420013 FYB1O15117 783 aa28.41■■■□□ 2.14
MCF2L-212ENST00000420013 PROM2Q8N271 834 aa28.4■■■□□ 2.14
MCF2L-212ENST00000420013 KCNQ2O43526 872 aa28.39■■■□□ 2.14
MCF2L-212ENST00000420013 LTV1Q96GA3 475 aaPredicted RBP28.39■■■□□ 2.14
MCF2L-212ENST00000420013 GGNBP2Q9H3C7 697 aa28.39■■■□□ 2.14
MCF2L-212ENST00000420013 MEGF6O75095 1541 aa28.38■■■□□ 2.13
MCF2L-212ENST00000420013 NSD3Q9BZ95 1437 aa28.38■■■□□ 2.13
MCF2L-212ENST00000420013 QSER1Q2KHR3 1735 aa28.38■■■□□ 2.13
MCF2L-212ENST00000420013 FLT4P35916 1363 aa28.37■■■□□ 2.13
MCF2L-212ENST00000420013 ACSBG1Q96GR2 724 aa28.37■■■□□ 2.13
MCF2L-212ENST00000420013 STK32BQ9NY57 414 aa28.37■■■□□ 2.13
MCF2L-212ENST00000420013 INSRP06213 1382 aa28.36■■■□□ 2.13
MCF2L-212ENST00000420013 RRS1Q15050 365 aaKnown RBP28.34■■■□□ 2.13
MCF2L-212ENST00000420013 PCGF6Q9BYE7 350 aa28.34■■■□□ 2.13
MCF2L-212ENST00000420013 PPP1R1BQ9UD71 204 aaPredicted RBP28.34■■■□□ 2.13
MCF2L-212ENST00000420013 CGNL1Q0VF96 1302 aa28.34■■■□□ 2.13
MCF2L-212ENST00000420013 LY75O60449 1722 aa28.33■■■□□ 2.13
MCF2L-212ENST00000420013 SLC15A2Q16348 729 aa28.32■■■□□ 2.12
MCF2L-212ENST00000420013 FBLN1P23142 703 aa28.31■■■□□ 2.12
MCF2L-212ENST00000420013 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms