RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 OVOS2A0A0J9YW53 1432 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 OVOS2Q6IE36 1432 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 COL18A1P39060 1754 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 ABCC6O95255 1503 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
HMGN1P4-201ENST00000419500 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
HMGN1P4-201ENST00000419500 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
HMGN1P4-201ENST00000419500 LTN1O94822 1766 aa17.72■□□□□ 0.43
HMGN1P4-201ENST00000419500 MYOM1P52179 1685 aa17.72■□□□□ 0.43
HMGN1P4-201ENST00000419500 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGN1P4-201ENST00000419500 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
HMGN1P4-201ENST00000419500 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
HMGN1P4-201ENST00000419500 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
HMGN1P4-201ENST00000419500 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
HMGN1P4-201ENST00000419500 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
HMGN1P4-201ENST00000419500 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
HMGN1P4-201ENST00000419500 COG3Q96JB2 828 aa17.7■□□□□ 0.42
HMGN1P4-201ENST00000419500 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
HMGN1P4-201ENST00000419500 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
HMGN1P4-201ENST00000419500 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
HMGN1P4-201ENST00000419500 POLR3GLQ9BT43 218 aa17.68■□□□□ 0.42
HMGN1P4-201ENST00000419500 PARP4Q9UKK3 1724 aaKnown RBP17.68■□□□□ 0.42
HMGN1P4-201ENST00000419500 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
HMGN1P4-201ENST00000419500 PDE3BQ13370 1112 aa17.67■□□□□ 0.42
HMGN1P4-201ENST00000419500 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
HMGN1P4-201ENST00000419500 WNK3Q9BYP7 1800 aa17.66■□□□□ 0.42
HMGN1P4-201ENST00000419500 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
HMGN1P4-201ENST00000419500 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
HMGN1P4-201ENST00000419500 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.42
HMGN1P4-201ENST00000419500 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
HMGN1P4-201ENST00000419500 ERBB3P21860 1342 aa17.64■□□□□ 0.41
HMGN1P4-201ENST00000419500 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
HMGN1P4-201ENST00000419500 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
HMGN1P4-201ENST00000419500 FYB1O15117 783 aa17.62■□□□□ 0.41
HMGN1P4-201ENST00000419500 FAM196AQ6ZSG2 479 aa17.62■□□□□ 0.41
HMGN1P4-201ENST00000419500 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
HMGN1P4-201ENST00000419500 BAG6P46379 1132 aa17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 DDB1Q16531 1140 aa17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
HMGN1P4-201ENST00000419500 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
HMGN1P4-201ENST00000419500 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
HMGN1P4-201ENST00000419500 OVOS2A0A0G2JMS6 1433 aa17.59■□□□□ 0.41
HMGN1P4-201ENST00000419500 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
HMGN1P4-201ENST00000419500 AMPHP49418 695 aa17.59■□□□□ 0.41
HMGN1P4-201ENST00000419500 IP6K1Q92551 441 aa17.59■□□□□ 0.41
HMGN1P4-201ENST00000419500 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
HMGN1P4-201ENST00000419500 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
HMGN1P4-201ENST00000419500 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
HMGN1P4-201ENST00000419500 C11orf95C9JLR9 678 aaPredicted RBP17.57■□□□□ 0.4
HMGN1P4-201ENST00000419500 TRIM37O94972 964 aa17.57■□□□□ 0.4
HMGN1P4-201ENST00000419500 HOXC9P31274 260 aa17.57■□□□□ 0.4
HMGN1P4-201ENST00000419500 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
HMGN1P4-201ENST00000419500 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
HMGN1P4-201ENST00000419500 TNS2Q63HR2 1409 aa17.55■□□□□ 0.4
HMGN1P4-201ENST00000419500 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
HMGN1P4-201ENST00000419500 FBLN1P23142 703 aa17.55■□□□□ 0.4
HMGN1P4-201ENST00000419500 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
HMGN1P4-201ENST00000419500 EXOC5O00471 708 aa17.53■□□□□ 0.4
HMGN1P4-201ENST00000419500 IL2RBP14784 551 aa17.53■□□□□ 0.4
HMGN1P4-201ENST00000419500 FLT4P35916 1363 aa17.53■□□□□ 0.4
HMGN1P4-201ENST00000419500 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
HMGN1P4-201ENST00000419500 APBA3O96018 575 aa17.52■□□□□ 0.4
HMGN1P4-201ENST00000419500 EN1Q05925 392 aaPredicted RBP17.52■□□□□ 0.4
HMGN1P4-201ENST00000419500 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
HMGN1P4-201ENST00000419500 KIF24Q5T7B8 1368 aa17.52■□□□□ 0.39
HMGN1P4-201ENST00000419500 PANK3Q9H999 370 aa17.51■□□□□ 0.39
HMGN1P4-201ENST00000419500 MARCH10Q8NA82 808 aaPredicted RBP17.5■□□□□ 0.39
HMGN1P4-201ENST00000419500 PARD3Q8TEW0 1356 aa17.5■□□□□ 0.39
HMGN1P4-201ENST00000419500 SRCAPQ6ZRS2 3230 aa17.49■□□□□ 0.39
HMGN1P4-201ENST00000419500 INSRP06213 1382 aa17.49■□□□□ 0.39
HMGN1P4-201ENST00000419500 KIF7Q2M1P5 1343 aa17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 BCL9O00512 1426 aa17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 SBF2Q86WG5 1849 aa17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
HMGN1P4-201ENST00000419500 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
HMGN1P4-201ENST00000419500 NSD2O96028 1365 aa17.47■□□□□ 0.39
HMGN1P4-201ENST00000419500 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
HMGN1P4-201ENST00000419500 RREB1Q92766 1687 aa17.45■□□□□ 0.38
HMGN1P4-201ENST00000419500 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
HMGN1P4-201ENST00000419500 CAMKK2Q96RR4 588 aa17.45■□□□□ 0.38
HMGN1P4-201ENST00000419500 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
HMGN1P4-201ENST00000419500 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
HMGN1P4-201ENST00000419500 RGPD3A6NKT7 1758 aaPredicted RBP17.44■□□□□ 0.38
HMGN1P4-201ENST00000419500 RGPD4Q7Z3J3 1758 aa17.44■□□□□ 0.38
HMGN1P4-201ENST00000419500 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
HMGN1P4-201ENST00000419500 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
HMGN1P4-201ENST00000419500 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
HMGN1P4-201ENST00000419500 MEGF6O75095 1541 aa17.43■□□□□ 0.38
HMGN1P4-201ENST00000419500 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
HMGN1P4-201ENST00000419500 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
HMGN1P4-201ENST00000419500 NUP188Q5SRE5 1749 aa17.43■□□□□ 0.38
HMGN1P4-201ENST00000419500 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
HMGN1P4-201ENST00000419500 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
HMGN1P4-201ENST00000419500 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms