RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 SLIT3O75094 1523 aa16.44■□□□□ 0.22
THUMPD3-204ENST00000419437 CRB1P82279 1406 aa16.44■□□□□ 0.22
THUMPD3-204ENST00000419437 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
THUMPD3-204ENST00000419437 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
THUMPD3-204ENST00000419437 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
THUMPD3-204ENST00000419437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
THUMPD3-204ENST00000419437 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
THUMPD3-204ENST00000419437 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
THUMPD3-204ENST00000419437 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
THUMPD3-204ENST00000419437 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-204ENST00000419437 USP47Q96K76 1375 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 WNK3Q9BYP7 1800 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 SOX12O15370 315 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 OVOS2A0A0G2JMS6 1433 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 COL18A1P39060 1754 aa16.41■□□□□ 0.22
THUMPD3-204ENST00000419437 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
THUMPD3-204ENST00000419437 TMF1P82094 1093 aa16.4■□□□□ 0.22
THUMPD3-204ENST00000419437 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
THUMPD3-204ENST00000419437 NME9Q86XW9 330 aa16.37■□□□□ 0.21
THUMPD3-204ENST00000419437 KCNH5Q8NCM2 988 aa16.37■□□□□ 0.21
THUMPD3-204ENST00000419437 BCL9O00512 1426 aa16.36■□□□□ 0.21
THUMPD3-204ENST00000419437 PLSCR1O15162 318 aa16.36■□□□□ 0.21
THUMPD3-204ENST00000419437 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
THUMPD3-204ENST00000419437 DDB1Q16531 1140 aa16.35■□□□□ 0.21
THUMPD3-204ENST00000419437 CDCA7Q9BWT1 371 aaPredicted RBP16.35■□□□□ 0.21
THUMPD3-204ENST00000419437 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
THUMPD3-204ENST00000419437 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 UTRNP46939 3433 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 ABCC6O95255 1503 aa16.34■□□□□ 0.21
THUMPD3-204ENST00000419437 CDCA8Q53HL2 280 aa16.33■□□□□ 0.2
THUMPD3-204ENST00000419437 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
THUMPD3-204ENST00000419437 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-204ENST00000419437 KCNQ2O43526 872 aa16.32■□□□□ 0.2
THUMPD3-204ENST00000419437 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
THUMPD3-204ENST00000419437 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
THUMPD3-204ENST00000419437 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
THUMPD3-204ENST00000419437 NFAT5O94916 1531 aa16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 USP31Q70CQ4 1352 aa16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 EIF4G2P78344 907 aaKnown RBP eCLIP16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
THUMPD3-204ENST00000419437 CSB-PGBD3P0DP91 1061 aa16.29■□□□□ 0.2
THUMPD3-204ENST00000419437 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
THUMPD3-204ENST00000419437 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
THUMPD3-204ENST00000419437 MARCH10Q8NA82 808 aaPredicted RBP16.28■□□□□ 0.2
THUMPD3-204ENST00000419437 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
THUMPD3-204ENST00000419437 COG3Q96JB2 828 aa16.27■□□□□ 0.2
THUMPD3-204ENST00000419437 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
THUMPD3-204ENST00000419437 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
THUMPD3-204ENST00000419437 YY1P25490 414 aa16.26■□□□□ 0.19
THUMPD3-204ENST00000419437 FYB1O15117 783 aa16.25■□□□□ 0.19
THUMPD3-204ENST00000419437 FBLN1P23142 703 aa16.25■□□□□ 0.19
THUMPD3-204ENST00000419437 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
THUMPD3-204ENST00000419437 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
THUMPD3-204ENST00000419437 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
THUMPD3-204ENST00000419437 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
THUMPD3-204ENST00000419437 EXOC5O00471 708 aa16.24■□□□□ 0.19
THUMPD3-204ENST00000419437 PTF1AQ7RTS3 328 aa16.24■□□□□ 0.19
THUMPD3-204ENST00000419437 PROM2Q8N271 834 aa16.24■□□□□ 0.19
THUMPD3-204ENST00000419437 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
THUMPD3-204ENST00000419437 LTN1O94822 1766 aa16.23■□□□□ 0.19
THUMPD3-204ENST00000419437 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
THUMPD3-204ENST00000419437 NLRP2Q9NX02 1062 aa16.22■□□□□ 0.19
THUMPD3-204ENST00000419437 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
THUMPD3-204ENST00000419437 ANKRD24Q8TF21 1146 aa16.21■□□□□ 0.19
THUMPD3-204ENST00000419437 IP6K1Q92551 441 aa16.21■□□□□ 0.19
THUMPD3-204ENST00000419437 LTV1Q96GA3 475 aaPredicted RBP16.21■□□□□ 0.19
THUMPD3-204ENST00000419437 MYOM1P52179 1685 aa16.21■□□□□ 0.18
THUMPD3-204ENST00000419437 AMPHP49418 695 aa16.2■□□□□ 0.18
THUMPD3-204ENST00000419437 ERBB3P21860 1342 aa16.19■□□□□ 0.18
THUMPD3-204ENST00000419437 STK32BQ9NY57 414 aa16.19■□□□□ 0.18
THUMPD3-204ENST00000419437 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
THUMPD3-204ENST00000419437 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
THUMPD3-204ENST00000419437 SLC15A2Q16348 729 aa16.18■□□□□ 0.18
THUMPD3-204ENST00000419437 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
THUMPD3-204ENST00000419437 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
THUMPD3-204ENST00000419437 PTGER2P43116 358 aa16.17■□□□□ 0.18
THUMPD3-204ENST00000419437 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
THUMPD3-204ENST00000419437 BTAF1O14981 1849 aa16.17■□□□□ 0.18
THUMPD3-204ENST00000419437 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
THUMPD3-204ENST00000419437 HOXC9P31274 260 aa16.16■□□□□ 0.18
THUMPD3-204ENST00000419437 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
THUMPD3-204ENST00000419437 IL2RBP14784 551 aa16.15■□□□□ 0.18
THUMPD3-204ENST00000419437 MTFR1LQ9H019 292 aa16.15■□□□□ 0.18
THUMPD3-204ENST00000419437 PANK3Q9H999 370 aa16.14■□□□□ 0.17
THUMPD3-204ENST00000419437 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
THUMPD3-204ENST00000419437 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
THUMPD3-204ENST00000419437 CHD4Q14839 1912 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms