RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 FCHSD2O94868 740 aa18.29■□□□□ 0.52
CHMP5-202ENST00000419016 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
CHMP5-202ENST00000419016 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
CHMP5-202ENST00000419016 LTN1O94822 1766 aa18.28■□□□□ 0.52
CHMP5-202ENST00000419016 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
CHMP5-202ENST00000419016 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
CHMP5-202ENST00000419016 TOM1O60784 492 aa18.26■□□□□ 0.51
CHMP5-202ENST00000419016 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
CHMP5-202ENST00000419016 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
CHMP5-202ENST00000419016 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
CHMP5-202ENST00000419016 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
CHMP5-202ENST00000419016 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
CHMP5-202ENST00000419016 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
CHMP5-202ENST00000419016 CPDO75976 1380 aa18.23■□□□□ 0.51
CHMP5-202ENST00000419016 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
CHMP5-202ENST00000419016 HMOX1P09601 288 aa18.22■□□□□ 0.51
CHMP5-202ENST00000419016 KDRP35968 1356 aa18.22■□□□□ 0.51
CHMP5-202ENST00000419016 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
CHMP5-202ENST00000419016 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
CHMP5-202ENST00000419016 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
CHMP5-202ENST00000419016 EYA1Q99502 592 aa18.22■□□□□ 0.51
CHMP5-202ENST00000419016 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
CHMP5-202ENST00000419016 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
CHMP5-202ENST00000419016 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
CHMP5-202ENST00000419016 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
CHMP5-202ENST00000419016 COL18A1P39060 1754 aa18.21■□□□□ 0.5
CHMP5-202ENST00000419016 CCDC27Q2M243 656 aa18.21■□□□□ 0.5
CHMP5-202ENST00000419016 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.5
CHMP5-202ENST00000419016 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.5
CHMP5-202ENST00000419016 ABCC6O95255 1503 aa18.2■□□□□ 0.5
CHMP5-202ENST00000419016 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
CHMP5-202ENST00000419016 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
CHMP5-202ENST00000419016 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
CHMP5-202ENST00000419016 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
CHMP5-202ENST00000419016 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
CHMP5-202ENST00000419016 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
CHMP5-202ENST00000419016 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
CHMP5-202ENST00000419016 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
CHMP5-202ENST00000419016 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
CHMP5-202ENST00000419016 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
CHMP5-202ENST00000419016 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
CHMP5-202ENST00000419016 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
CHMP5-202ENST00000419016 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
CHMP5-202ENST00000419016 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
CHMP5-202ENST00000419016 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
CHMP5-202ENST00000419016 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
CHMP5-202ENST00000419016 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CHMP5-202ENST00000419016 GOLGA2Q08379 1002 aa18.14■□□□□ 0.49
CHMP5-202ENST00000419016 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
CHMP5-202ENST00000419016 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
CHMP5-202ENST00000419016 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
CHMP5-202ENST00000419016 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
CHMP5-202ENST00000419016 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
CHMP5-202ENST00000419016 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
CHMP5-202ENST00000419016 RGPD5Q99666 1765 aa18.13■□□□□ 0.49
CHMP5-202ENST00000419016 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
CHMP5-202ENST00000419016 NEFMP07197 916 aa18.12■□□□□ 0.49
CHMP5-202ENST00000419016 RIPK4P57078 832 aa18.12■□□□□ 0.49
CHMP5-202ENST00000419016 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
CHMP5-202ENST00000419016 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
CHMP5-202ENST00000419016 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
CHMP5-202ENST00000419016 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
CHMP5-202ENST00000419016 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
CHMP5-202ENST00000419016 FAM83GA6ND36 823 aa18.08■□□□□ 0.49
CHMP5-202ENST00000419016 E9PSI1 815 aa18.08■□□□□ 0.49
CHMP5-202ENST00000419016 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.49
CHMP5-202ENST00000419016 IL16Q14005 1332 aa18.06■□□□□ 0.48
CHMP5-202ENST00000419016 MTHFSDQ2M296 383 aaKnown RBP18.06■□□□□ 0.48
CHMP5-202ENST00000419016 COL5A2P05997 1499 aaPredicted RBP18.06■□□□□ 0.48
CHMP5-202ENST00000419016 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
CHMP5-202ENST00000419016 DLG5Q8TDM6 1919 aa18.05■□□□□ 0.48
CHMP5-202ENST00000419016 WDR17Q8IZU2 1322 aa18.04■□□□□ 0.48
CHMP5-202ENST00000419016 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
CHMP5-202ENST00000419016 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
CHMP5-202ENST00000419016 NLRP2Q9NX02 1062 aa18.02■□□□□ 0.48
CHMP5-202ENST00000419016 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.47
CHMP5-202ENST00000419016 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
CHMP5-202ENST00000419016 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
CHMP5-202ENST00000419016 JCADQ9P266 1359 aa18.01■□□□□ 0.47
CHMP5-202ENST00000419016 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
CHMP5-202ENST00000419016 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
CHMP5-202ENST00000419016 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
CHMP5-202ENST00000419016 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
CHMP5-202ENST00000419016 ZNF853P0CG23 659 aa18■□□□□ 0.47
CHMP5-202ENST00000419016 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
CHMP5-202ENST00000419016 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
CHMP5-202ENST00000419016 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
CHMP5-202ENST00000419016 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
CHMP5-202ENST00000419016 CARD10Q9BWT7 1032 aa17.99■□□□□ 0.47
CHMP5-202ENST00000419016 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
CHMP5-202ENST00000419016 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
CHMP5-202ENST00000419016 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
CHMP5-202ENST00000419016 MEGF6O75095 1541 aa17.97■□□□□ 0.47
CHMP5-202ENST00000419016 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
CHMP5-202ENST00000419016 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms