RNA–Protein interactions for RNA: ENST00000418983.1

HCG4-201, Transcript of HLA complex group 4, humanhuman

BASIC

Gene HCG4, Length 998 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG4-201ENST00000418983 CCDC125Q86Z20 511 aa22.74■■□□□ 1.23
HCG4-201ENST00000418983 TRPC5Q9UL62 973 aaPredicted RBP22.74■■□□□ 1.23
HCG4-201ENST00000418983 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
HCG4-201ENST00000418983 LRP5O75197 1615 aa22.72■■□□□ 1.23
HCG4-201ENST00000418983 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
HCG4-201ENST00000418983 KIAA0232Q92628 1395 aa22.72■■□□□ 1.23
HCG4-201ENST00000418983 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
HCG4-201ENST00000418983 PPP2R1AP30153 589 aa22.71■■□□□ 1.23
HCG4-201ENST00000418983 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
HCG4-201ENST00000418983 USP21Q9UK80 565 aa22.71■■□□□ 1.23
HCG4-201ENST00000418983 MAP3K19Q56UN5 1328 aa22.71■■□□□ 1.23
HCG4-201ENST00000418983 FLT4P35916 1363 aa22.71■■□□□ 1.23
HCG4-201ENST00000418983 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
HCG4-201ENST00000418983 AMPHP49418 695 aa22.7■■□□□ 1.22
HCG4-201ENST00000418983 POLKQ9UBT6 870 aa22.7■■□□□ 1.22
HCG4-201ENST00000418983 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
HCG4-201ENST00000418983 BLMP54132 1417 aaPredicted RBP22.69■■□□□ 1.22
HCG4-201ENST00000418983 BCL9LQ86UU0 1499 aa22.68■■□□□ 1.22
HCG4-201ENST00000418983 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
HCG4-201ENST00000418983 CFAP53Q96M91 514 aa22.68■■□□□ 1.22
HCG4-201ENST00000418983 IP6K1Q92551 441 aa22.67■■□□□ 1.22
HCG4-201ENST00000418983 MTHFSP49914 203 aa22.66■■□□□ 1.22
HCG4-201ENST00000418983 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
HCG4-201ENST00000418983 COL18A1P39060 1754 aa22.66■■□□□ 1.22
HCG4-201ENST00000418983 INSRP06213 1382 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 ZBTB7CA1YPR0 619 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
HCG4-201ENST00000418983 HOXC9P31274 260 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 NWD2Q9ULI1 1742 aa22.65■■□□□ 1.22
HCG4-201ENST00000418983 FBLN1P23142 703 aa22.64■■□□□ 1.21
HCG4-201ENST00000418983 PLCH1Q4KWH8 1693 aa22.63■■□□□ 1.21
HCG4-201ENST00000418983 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
HCG4-201ENST00000418983 FAM208AQ9UK61 1670 aaKnown RBP22.62■■□□□ 1.21
HCG4-201ENST00000418983 CHRNA2Q15822 529 aa22.61■■□□□ 1.21
HCG4-201ENST00000418983 SLIT2O94813 1529 aa22.6■■□□□ 1.21
HCG4-201ENST00000418983 GLI3P10071 1580 aa22.59■■□□□ 1.21
HCG4-201ENST00000418983 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
HCG4-201ENST00000418983 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.21
HCG4-201ENST00000418983 CCER2I3L3R5 266 aa22.58■■□□□ 1.21
HCG4-201ENST00000418983 BTG4Q9NY30 223 aa22.58■■□□□ 1.21
HCG4-201ENST00000418983 COL5A2P05997 1499 aaPredicted RBP22.58■■□□□ 1.2
HCG4-201ENST00000418983 RGPD5Q99666 1765 aa22.58■■□□□ 1.2
HCG4-201ENST00000418983 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
HCG4-201ENST00000418983 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
HCG4-201ENST00000418983 COL3A1P02461 1466 aaPredicted RBP22.57■■□□□ 1.2
HCG4-201ENST00000418983 ERBB3P21860 1342 aa22.57■■□□□ 1.2
HCG4-201ENST00000418983 DIAPH1O60610 1272 aaKnown RBP22.56■■□□□ 1.2
HCG4-201ENST00000418983 AXIN2Q9Y2T1 843 aa22.56■■□□□ 1.2
HCG4-201ENST00000418983 NRAPQ86VF7 1730 aa22.56■■□□□ 1.2
HCG4-201ENST00000418983 EVA1CP58658 441 aa22.55■■□□□ 1.2
HCG4-201ENST00000418983 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
HCG4-201ENST00000418983 GJD4Q96KN9 370 aaPredicted RBP22.55■■□□□ 1.2
HCG4-201ENST00000418983 WDR17Q8IZU2 1322 aa22.55■■□□□ 1.2
HCG4-201ENST00000418983 CSB-PGBD3P0DP91 1061 aa22.53■■□□□ 1.2
HCG4-201ENST00000418983 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
HCG4-201ENST00000418983 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
HCG4-201ENST00000418983 MIER1Q8N108 512 aa22.52■■□□□ 1.2
HCG4-201ENST00000418983 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
HCG4-201ENST00000418983 IL13P35225 146 aa22.51■■□□□ 1.19
HCG4-201ENST00000418983 CRB1P82279 1406 aa22.5■■□□□ 1.19
HCG4-201ENST00000418983 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
HCG4-201ENST00000418983 STRN4Q9NRL3 753 aa22.5■■□□□ 1.19
HCG4-201ENST00000418983 RGPD1P0DJD0 1748 aa22.48■■□□□ 1.19
HCG4-201ENST00000418983 WDR43Q15061 677 aaKnown RBP eCLIP22.48■■□□□ 1.19
HCG4-201ENST00000418983 TOM1L2Q6ZVM7 507 aa22.48■■□□□ 1.19
HCG4-201ENST00000418983 CARD10Q9BWT7 1032 aa22.47■■□□□ 1.19
HCG4-201ENST00000418983 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
HCG4-201ENST00000418983 VPS72Q15906 364 aa22.46■■□□□ 1.19
HCG4-201ENST00000418983 DEFB132Q7Z7B7 95 aa22.46■■□□□ 1.19
HCG4-201ENST00000418983 NLRP2Q9NX02 1062 aa22.46■■□□□ 1.19
HCG4-201ENST00000418983 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
HCG4-201ENST00000418983 LARP1Q6PKG0 1096 aaKnown RBP22.45■■□□□ 1.18
HCG4-201ENST00000418983 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
HCG4-201ENST00000418983 EYA1Q99502 592 aa22.44■■□□□ 1.18
HCG4-201ENST00000418983 PNNQ9H307 717 aaKnown RBP22.44■■□□□ 1.18
HCG4-201ENST00000418983 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
HCG4-201ENST00000418983 THRAP3Q9Y2W1 955 aaKnown RBP22.44■■□□□ 1.18
HCG4-201ENST00000418983 NBPF6Q5VWK0 638 aa22.43■■□□□ 1.18
HCG4-201ENST00000418983 NBPF4Q96M43 638 aa22.43■■□□□ 1.18
HCG4-201ENST00000418983 RGPD2P0DJD1 1756 aa22.43■■□□□ 1.18
HCG4-201ENST00000418983 KDRP35968 1356 aa22.42■■□□□ 1.18
HCG4-201ENST00000418983 SPATA31A1Q5TZJ5 1347 aa22.42■■□□□ 1.18
HCG4-201ENST00000418983 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
HCG4-201ENST00000418983 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
HCG4-201ENST00000418983 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
HCG4-201ENST00000418983 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
HCG4-201ENST00000418983 CCDC184Q52MB2 194 aa22.41■■□□□ 1.18
HCG4-201ENST00000418983 CCDC9Q9Y3X0 531 aaKnown RBP22.41■■□□□ 1.18
HCG4-201ENST00000418983 ONECUT3O60422 494 aaPredicted RBP22.4■■□□□ 1.18
HCG4-201ENST00000418983 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
HCG4-201ENST00000418983 PNISRQ8TF01 805 aaKnown RBP22.4■■□□□ 1.18
HCG4-201ENST00000418983 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
HCG4-201ENST00000418983 FCHSD2O94868 740 aa22.39■■□□□ 1.17
HCG4-201ENST00000418983 NEFMP07197 916 aa22.38■■□□□ 1.17
HCG4-201ENST00000418983 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
HCG4-201ENST00000418983 RAPGEF4Q8WZA2 1011 aa22.38■■□□□ 1.17
HCG4-201ENST00000418983 WNK3Q9BYP7 1800 aa22.38■■□□□ 1.17
HCG4-201ENST00000418983 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms