RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 CARD14Q9BXL6 1004 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 OVOS2A0A0J9YW53 1432 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 OVOS2Q6IE36 1432 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 NFAT5O94916 1531 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 C11orf95C9JLR9 678 aaPredicted RBP15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 UPF1Q92900 1129 aaKnown RBP eCLIP15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 PANK3Q9H999 370 aa15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 MYOM1P52179 1685 aa15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
TM9SF4-203ENST00000417389 WDR17Q8IZU2 1322 aa15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 CRB1P82279 1406 aa15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 FBLN1P23142 703 aa15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 NLRP2Q9NX02 1062 aa15.19■□□□□ 0.02
TM9SF4-203ENST00000417389 KIF7Q2M1P5 1343 aa15.18■□□□□ 0.02
TM9SF4-203ENST00000417389 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
TM9SF4-203ENST00000417389 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
TM9SF4-203ENST00000417389 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
TM9SF4-203ENST00000417389 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
TM9SF4-203ENST00000417389 FAM182BQ5T319 152 aa15.16■□□□□ 0.02
TM9SF4-203ENST00000417389 IP6K1Q92551 441 aa15.16■□□□□ 0.02
TM9SF4-203ENST00000417389 LTN1O94822 1766 aa15.16■□□□□ 0.02
TM9SF4-203ENST00000417389 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
TM9SF4-203ENST00000417389 COL18A1P39060 1754 aa15.14■□□□□ 0.01
TM9SF4-203ENST00000417389 HOXC9P31274 260 aa15.14■□□□□ 0.01
TM9SF4-203ENST00000417389 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
TM9SF4-203ENST00000417389 BRWD3Q6RI45 1802 aa15.14■□□□□ 0.01
TM9SF4-203ENST00000417389 ERBB3P21860 1342 aa15.14■□□□□ 0.01
TM9SF4-203ENST00000417389 RGPD5Q99666 1765 aa15.13■□□□□ 0.01
TM9SF4-203ENST00000417389 ABCC6O95255 1503 aa15.13■□□□□ 0.01
TM9SF4-203ENST00000417389 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
TM9SF4-203ENST00000417389 DDB1Q16531 1140 aa15.13■□□□□ 0.01
TM9SF4-203ENST00000417389 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
TM9SF4-203ENST00000417389 SMG6Q86US8 1419 aaKnown RBP15.12■□□□□ 0.01
TM9SF4-203ENST00000417389 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
TM9SF4-203ENST00000417389 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
TM9SF4-203ENST00000417389 CCDC125Q86Z20 511 aa15.11■□□□□ 0.01
TM9SF4-203ENST00000417389 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
TM9SF4-203ENST00000417389 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
TM9SF4-203ENST00000417389 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
TM9SF4-203ENST00000417389 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
TM9SF4-203ENST00000417389 EXOC5O00471 708 aa15.09■□□□□ 0.01
TM9SF4-203ENST00000417389 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
TM9SF4-203ENST00000417389 FLT4P35916 1363 aa15.09■□□□□ 0.01
TM9SF4-203ENST00000417389 IL2RBP14784 551 aa15.08■□□□□ 0
TM9SF4-203ENST00000417389 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
TM9SF4-203ENST00000417389 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
TM9SF4-203ENST00000417389 NSD2O96028 1365 aa15.08■□□□□ 0
TM9SF4-203ENST00000417389 TRIM37O94972 964 aa15.07■□□□□ 0
TM9SF4-203ENST00000417389 BAG6P46379 1132 aa15.06■□□□□ 0
TM9SF4-203ENST00000417389 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
TM9SF4-203ENST00000417389 EP400Q96L91 3159 aa15.05■□□□□ -0
TM9SF4-203ENST00000417389 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
TM9SF4-203ENST00000417389 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
TM9SF4-203ENST00000417389 POLKQ9UBT6 870 aa15.05■□□□□ -0
TM9SF4-203ENST00000417389 INSRP06213 1382 aa15.05■□□□□ -0
TM9SF4-203ENST00000417389 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
TM9SF4-203ENST00000417389 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
TM9SF4-203ENST00000417389 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
TM9SF4-203ENST00000417389 OVOS2A0A0G2JMS6 1433 aa15.03■□□□□ -0
TM9SF4-203ENST00000417389 NBPF6Q5VWK0 638 aa15.03■□□□□ -0
TM9SF4-203ENST00000417389 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
TM9SF4-203ENST00000417389 NBPF4Q96M43 638 aa15.03■□□□□ -0
TM9SF4-203ENST00000417389 ANKRD26Q9UPS8 1709 aa15.03■□□□□ -0
TM9SF4-203ENST00000417389 LRRC37A3O60309 1634 aa15.03■□□□□ -0
TM9SF4-203ENST00000417389 DISP2A7MBM2 1401 aa15.02■□□□□ -0
TM9SF4-203ENST00000417389 APBA3O96018 575 aa15.02■□□□□ -0
TM9SF4-203ENST00000417389 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
TM9SF4-203ENST00000417389 MARCH10Q8NA82 808 aaPredicted RBP15.02■□□□□ -0
TM9SF4-203ENST00000417389 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
TM9SF4-203ENST00000417389 FAM208AQ9UK61 1670 aaKnown RBP15.02□□□□□ -0.01
TM9SF4-203ENST00000417389 TNS2Q63HR2 1409 aa15.01□□□□□ -0.01
TM9SF4-203ENST00000417389 TATP17735 454 aaPredicted RBP15.01□□□□□ -0.01
TM9SF4-203ENST00000417389 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
TM9SF4-203ENST00000417389 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
TM9SF4-203ENST00000417389 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
TM9SF4-203ENST00000417389 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
TM9SF4-203ENST00000417389 ZCRB1Q8TBF4 217 aaKnown RBP14.99□□□□□ -0.01
TM9SF4-203ENST00000417389 ACSBG1Q96GR2 724 aa14.99□□□□□ -0.01
TM9SF4-203ENST00000417389 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
TM9SF4-203ENST00000417389 EIF4A2Q14240 407 aaKnown RBP14.98□□□□□ -0.01
TM9SF4-203ENST00000417389 EYA1Q99502 592 aa14.97□□□□□ -0.01
TM9SF4-203ENST00000417389 RGPD2P0DJD1 1756 aa14.97□□□□□ -0.01
TM9SF4-203ENST00000417389 MTHFSP49914 203 aa14.96□□□□□ -0.01
TM9SF4-203ENST00000417389 SYTL4Q96C24 671 aaPredicted RBP14.96□□□□□ -0.01
TM9SF4-203ENST00000417389 MEGF6O75095 1541 aa14.96□□□□□ -0.02
TM9SF4-203ENST00000417389 EZH2Q15910 746 aaKnown RBP14.95□□□□□ -0.02
TM9SF4-203ENST00000417389 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
TM9SF4-203ENST00000417389 KCNQ2O43526 872 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms