RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
FNDC3B-203ENST00000416957 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
FNDC3B-203ENST00000416957 LTKP29376 864 aa10.68□□□□□ -0.7
FNDC3B-203ENST00000416957 SLC20A2Q08357 652 aa10.68□□□□□ -0.7
FNDC3B-203ENST00000416957 TERF2IPQ9NYB0 399 aa10.68□□□□□ -0.7
FNDC3B-203ENST00000416957 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 TSHZ1Q6ZSZ6 1077 aa10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 LETM1O95202 739 aaPredicted RBP10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 SPTY2D1Q68D10 685 aaPredicted RBP10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 PHF23Q9BUL5 403 aaPredicted RBP10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 C14orf93Q9H972 538 aaKnown RBP10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
FNDC3B-203ENST00000416957 ADGRB2O60241 1585 aa10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 LRPPRCP42704 1394 aaKnown RBP10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 BRD1O95696 1058 aa10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 ZBTB9Q96C00 473 aa10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 STRCP1A6NGW2 1772 aa10.66□□□□□ -0.7
FNDC3B-203ENST00000416957 RNF217Q8TC41 542 aa10.65□□□□□ -0.7
FNDC3B-203ENST00000416957 FAM135BQ49AJ0 1406 aa10.65□□□□□ -0.7
FNDC3B-203ENST00000416957 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
FNDC3B-203ENST00000416957 NCKAP5LQ9HCH0 1330 aa10.65□□□□□ -0.71
FNDC3B-203ENST00000416957 SSR1P43307 286 aaKnown RBP10.64□□□□□ -0.71
FNDC3B-203ENST00000416957 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
FNDC3B-203ENST00000416957 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
FNDC3B-203ENST00000416957 YTHDC2Q9H6S0 1430 aaKnown RBP10.64□□□□□ -0.71
FNDC3B-203ENST00000416957 SATB1Q01826 763 aa10.63□□□□□ -0.71
FNDC3B-203ENST00000416957 LTBP4Q8N2S1 1624 aa10.63□□□□□ -0.71
FNDC3B-203ENST00000416957 HSPA2P54652 639 aa10.63□□□□□ -0.71
FNDC3B-203ENST00000416957 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
FNDC3B-203ENST00000416957 EIF3AQ14152 1382 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-203ENST00000416957 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 RIPOR2Q9Y4F9 1068 aa10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 XIRP1Q702N8 1843 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 IRX5P78411 483 aaPredicted RBP10.62□□□□□ -0.71
FNDC3B-203ENST00000416957 CDC42BPGQ6DT37 1551 aa10.61□□□□□ -0.71
FNDC3B-203ENST00000416957 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
FNDC3B-203ENST00000416957 DNAJC14Q6Y2X3 702 aaPredicted RBP10.61□□□□□ -0.71
FNDC3B-203ENST00000416957 ROCK2O75116 1388 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 METP08581 1390 aa10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 KCNA6P17658 529 aa10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 RAI14Q9P0K7 980 aa10.6□□□□□ -0.71
FNDC3B-203ENST00000416957 DCCP43146 1447 aa10.59□□□□□ -0.71
FNDC3B-203ENST00000416957 GOLGA6L3A6NEY3 463 aa10.59□□□□□ -0.71
FNDC3B-203ENST00000416957 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
FNDC3B-203ENST00000416957 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
FNDC3B-203ENST00000416957 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
FNDC3B-203ENST00000416957 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
FNDC3B-203ENST00000416957 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
FNDC3B-203ENST00000416957 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
FNDC3B-203ENST00000416957 CT47B1P0C2W7 299 aaPredicted RBP10.57□□□□□ -0.72
FNDC3B-203ENST00000416957 MRVI1Q9Y6F6 885 aa10.57□□□□□ -0.72
FNDC3B-203ENST00000416957 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
FNDC3B-203ENST00000416957 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 CEP83Q9Y592 693 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 ADGRL3Q9HAR2 1447 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 MYBPC2Q14324 1141 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
FNDC3B-203ENST00000416957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.55□□□□□ -0.72
FNDC3B-203ENST00000416957 TMC1Q8TDI8 760 aa10.55□□□□□ -0.72
FNDC3B-203ENST00000416957 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
FNDC3B-203ENST00000416957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■■ 169.3
FNDC3B-203ENST00000416957 KIF1AQ12756 1690 aa10.54□□□□□ -0.72
FNDC3B-203ENST00000416957 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
FNDC3B-203ENST00000416957 ROBO2Q9HCK4 1378 aa10.54□□□□□ -0.72
FNDC3B-203ENST00000416957 ZKSCAN8Q15776 578 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 AMOTL2Q9Y2J4 779 aa10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 USP47Q96K76 1375 aa10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 CT47A1Q5JQC4 288 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 TSPAN18Q96SJ8 248 aa10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 ANKARQ7Z5J8 1434 aa10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 APBB1IPQ7Z5R6 666 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-203ENST00000416957 HDAC1Q13547 482 aaPredicted RBP10.52□□□□□ -0.72
FNDC3B-203ENST00000416957 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.72
FNDC3B-203ENST00000416957 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 CCER2I3L3R5 266 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 IPO8O15397 1037 aaKnown RBP10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 NRDCO43847 1150 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 KCNJ4P48050 445 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 BORCS6Q96GS4 357 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 MTA1Q13330 715 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 ATL2Q8NHH9 583 aa10.52□□□□□ -0.73
FNDC3B-203ENST00000416957 GOLGA6CA6NDK9 693 aa10.51□□□□□ -0.73
FNDC3B-203ENST00000416957 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
FNDC3B-203ENST00000416957 GOLGA6DP0CG33 693 aa10.51□□□□□ -0.73
FNDC3B-203ENST00000416957 SCP2P22307 547 aa10.51□□□□□ -0.73
FNDC3B-203ENST00000416957 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms