RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 SH3RF1Q7Z6J0 888 aa8.7□□□□□ -1.02
ATG4AP1-201ENST00000416893 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
ATG4AP1-201ENST00000416893 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
ATG4AP1-201ENST00000416893 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
ATG4AP1-201ENST00000416893 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
ATG4AP1-201ENST00000416893 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
ATG4AP1-201ENST00000416893 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
ATG4AP1-201ENST00000416893 FSHRP23945 695 aa8.67□□□□□ -1.02
ATG4AP1-201ENST00000416893 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
ATG4AP1-201ENST00000416893 TRMT44Q8IYL2 757 aaKnown RBP8.67□□□□□ -1.02
ATG4AP1-201ENST00000416893 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
ATG4AP1-201ENST00000416893 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
ATG4AP1-201ENST00000416893 MAGEB6P1A0A0J9YX57 407 aa8.66□□□□□ -1.02
ATG4AP1-201ENST00000416893 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
ATG4AP1-201ENST00000416893 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
ATG4AP1-201ENST00000416893 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
ATG4AP1-201ENST00000416893 GPKOWQ92917 476 aaPredicted RBP eCLIP8.66□□□□□ -1.02
ATG4AP1-201ENST00000416893 CTDSPL2Q05D32 466 aa8.65□□□□□ -1.02
ATG4AP1-201ENST00000416893 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
ATG4AP1-201ENST00000416893 FAM181BA6NEQ2 426 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 MAN1A2O60476 641 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 UPP2O95045 317 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 BMP2P12643 396 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
ATG4AP1-201ENST00000416893 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
ATG4AP1-201ENST00000416893 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
ATG4AP1-201ENST00000416893 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
ATG4AP1-201ENST00000416893 EMILIN1Q9Y6C2 1016 aa8.62□□□□□ -1.03
ATG4AP1-201ENST00000416893 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
ATG4AP1-201ENST00000416893 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATG4AP1-201ENST00000416893 NESP48681 1621 aa8.61□□□□□ -1.03
ATG4AP1-201ENST00000416893 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
ATG4AP1-201ENST00000416893 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
ATG4AP1-201ENST00000416893 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
ATG4AP1-201ENST00000416893 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
ATG4AP1-201ENST00000416893 SOS2Q07890 1332 aaPredicted RBP8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 FKBPLQ9UIM3 349 aa8.59□□□□□ -1.03
ATG4AP1-201ENST00000416893 LAMC3Q9Y6N6 1575 aa8.58□□□□□ -1.04
ATG4AP1-201ENST00000416893 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
ATG4AP1-201ENST00000416893 DNMT3LQ9UJW3 386 aa8.58□□□□□ -1.04
ATG4AP1-201ENST00000416893 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
ATG4AP1-201ENST00000416893 NR6A1Q15406 480 aa8.57□□□□□ -1.04
ATG4AP1-201ENST00000416893 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
ATG4AP1-201ENST00000416893 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
ATG4AP1-201ENST00000416893 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
ATG4AP1-201ENST00000416893 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
ATG4AP1-201ENST00000416893 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
ATG4AP1-201ENST00000416893 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
ATG4AP1-201ENST00000416893 CDV3Q9UKY7 258 aaKnown RBP8.56□□□□□ -1.04
ATG4AP1-201ENST00000416893 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
ATG4AP1-201ENST00000416893 CADPSQ9ULU8 1353 aa8.55□□□□□ -1.04
ATG4AP1-201ENST00000416893 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
ATG4AP1-201ENST00000416893 CBLBQ13191 982 aa8.54□□□□□ -1.04
ATG4AP1-201ENST00000416893 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.04
ATG4AP1-201ENST00000416893 Q6ZVU0 165 aa8.54□□□□□ -1.04
ATG4AP1-201ENST00000416893 AP1G2O75843 785 aa8.53□□□□□ -1.04
ATG4AP1-201ENST00000416893 PTK2Q05397 1052 aa8.53□□□□□ -1.04
ATG4AP1-201ENST00000416893 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
ATG4AP1-201ENST00000416893 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.05
ATG4AP1-201ENST00000416893 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
ATG4AP1-201ENST00000416893 GPSM3Q9Y4H4 160 aa8.52□□□□□ -1.05
ATG4AP1-201ENST00000416893 PDS5BQ9NTI5 1447 aa8.52□□□□□ -1.05
ATG4AP1-201ENST00000416893 KIF21AQ7Z4S6 1674 aa8.52□□□□□ -1.05
ATG4AP1-201ENST00000416893 CFTRP13569 1480 aa8.51□□□□□ -1.05
ATG4AP1-201ENST00000416893 SPINT1O43278 529 aa8.51□□□□□ -1.05
ATG4AP1-201ENST00000416893 RFC5P40937 340 aa8.51□□□□□ -1.05
ATG4AP1-201ENST00000416893 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
ATG4AP1-201ENST00000416893 INTS6LQ5JSJ4 861 aaKnown RBP8.51□□□□□ -1.05
ATG4AP1-201ENST00000416893 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
ATG4AP1-201ENST00000416893 SUPT5HO00267 1087 aaKnown RBP8.5□□□□□ -1.05
ATG4AP1-201ENST00000416893 PTSQ03393 145 aa8.5□□□□□ -1.05
ATG4AP1-201ENST00000416893 ADAM32Q8TC27 787 aa8.5□□□□□ -1.05
ATG4AP1-201ENST00000416893 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
ATG4AP1-201ENST00000416893 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
ATG4AP1-201ENST00000416893 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
ATG4AP1-201ENST00000416893 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
ATG4AP1-201ENST00000416893 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
ATG4AP1-201ENST00000416893 HMX1Q9NP08 348 aaPredicted RBP8.48□□□□□ -1.05
ATG4AP1-201ENST00000416893 PRDM2Q13029 1718 aa8.48□□□□□ -1.05
ATG4AP1-201ENST00000416893 CUX2O14529 1486 aa8.47□□□□□ -1.05
ATG4AP1-201ENST00000416893 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
ATG4AP1-201ENST00000416893 FANCD2Q9BXW9 1451 aa8.46□□□□□ -1.05
ATG4AP1-201ENST00000416893 RELBQ01201 579 aa8.46□□□□□ -1.06
ATG4AP1-201ENST00000416893 GPR161Q8N6U8 529 aaKnown RBP8.46□□□□□ -1.06
ATG4AP1-201ENST00000416893 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 KRT76Q01546 638 aa8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 TMEM132AQ24JP5 1023 aa8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 TMPRSS4Q9NRS4 437 aa8.45□□□□□ -1.06
ATG4AP1-201ENST00000416893 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms